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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, golgi, plasma membrane

Predictor Summary:
  • extracellular 5
  • golgi 5
  • plasma membrane 5
  • endoplasmic reticulum 4
  • vacuole 4
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, golgi, plasma membrane
Any Predictor:secretory
iPSORT:secretory
MultiLoc:golgi
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d002065_P006
Zm00001d007301_P001
Zm00001d016017_P002
Zm00001d026458_P002
Zm00001d028108_P001
Zm00001d035557_P001
Zm00001d041417_P001
Zm00001d049099_P005

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G19390.1 Zm00001d007301_P001 AT1G21750.1 18676877
AT3G19390.1 Zm00001d016017_P002 AT1G21750.1 18676877
AT3G19390.1 Zm00001d028108_P001 AT1G21750.1 18676877
AT3G19390.1 Zm00001d035557_P001 AT1G21750.1 18676877
AT3G19390.1 Zm00001d041417_P001 AT1G21750.1 18676877
AT3G19390.1 Zm00001d049099_P005 AT1G21750.1 18676877
AT3G19390.1 Zm00001d002065_P006 AT1G47128.1 26016527
AT3G19390.1 Zm00001d026458_P002 AT1G47128.1 26016527
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d001900_P002 Maize endoplasmic reticulum, extracellular, plasma membrane 89.79 90.75
EES13064 Sorghum extracellular, plasma membrane, vacuole 89.15 89.72
TraesCS2B01G576300.1 Wheat unclear 79.57 79.74
TraesCS2A01G545700.1 Wheat unclear 78.94 78.6
TraesCS2D01G546600.1 Wheat plasma membrane, vacuole 79.36 78.53
Os04t0670200-02 Rice extracellular 81.06 77.44
HORVU2Hr1G121440.2 Barley endoplasmic reticulum 76.6 72.0
VIT_03s0180g00010.t01 Wine grape extracellular 56.6 62.44
VIT_07s0031g00050.t01 Wine grape nucleus 43.62 62.12
Zm00001d002065_P006 Maize plasma membrane 60.64 60.9
Zm00001d026458_P002 Maize endoplasmic reticulum 61.7 60.42
PGSC0003DMT400066566 Potato endoplasmic reticulum 60.0 60.0
Solyc01g107760.2.1 Tomato extracellular 59.79 59.79
Solyc02g093040.2.1 Tomato endoplasmic reticulum, extracellular, vacuole 46.17 59.78
PGSC0003DMT400064314 Potato endoplasmic reticulum, extracellular, vacuole 45.53 59.28
KRH57968 Soybean endoplasmic reticulum 44.89 57.65
CDX95457 Canola endoplasmic reticulum, extracellular, vacuole 54.47 57.02
PGSC0003DMT400053921 Potato extracellular 43.83 56.59
CDY46179 Canola endoplasmic reticulum 54.04 56.44
AT4G36880.1 Thale cress vacuole 45.11 56.38
CDY50157 Canola endoplasmic reticulum, extracellular, vacuole 53.83 56.35
Bra022418.1-P Field mustard endoplasmic reticulum 53.83 56.22
AT3G19390.1 Thale cress endoplasmic reticulum 54.04 56.19
KRH07581 Soybean endoplasmic reticulum 43.62 56.01
KRH04538 Soybean extracellular 43.4 55.74
Bra010592.1-P Field mustard extracellular, golgi, vacuole 44.04 55.35
Bra038206.1-P Field mustard extracellular, plasma membrane, vacuole 52.55 54.89
CDY22445 Canola vacuole 43.62 54.81
CDX75633 Canola vacuole 43.4 54.55
CDX69285 Canola endoplasmic reticulum, vacuole 43.19 54.28
AT3G19400.1 Thale cress endoplasmic reticulum, vacuole 41.7 54.14
CDY50154 Canola endoplasmic reticulum 50.43 53.86
CDX95451 Canola endoplasmic reticulum, extracellular, vacuole 50.43 53.86
Bra011746.1-P Field mustard vacuole 42.77 53.74
CDY44047 Canola vacuole 43.83 53.65
Zm00001d037301_P001 Maize mitochondrion 24.04 53.3
Bra038208.1-P Field mustard endoplasmic reticulum 50.0 53.29
Solyc03g044230.1.1 Tomato extracellular 42.34 52.51
Zm00001d036541_P002 Maize extracellular, plasma membrane 51.06 49.79
CDX99227 Canola endoplasmic reticulum 53.19 49.31
Zm00001d042446_P001 Maize extracellular 38.51 49.18
Zm00001d004364_P001 Maize nucleus 31.91 48.86
Zm00001d011787_P001 Maize extracellular 40.0 48.83
Zm00001d045711_P001 Maize extracellular 35.32 48.82
Zm00001d037303_P001 Maize extracellular 35.32 48.82
Zm00001d045713_P001 Maize extracellular 35.11 48.53
Zm00001d045709_P001 Maize extracellular 32.13 48.09
Zm00001d025038_P001 Maize endoplasmic reticulum, extracellular 35.96 48.01
Zm00001d008796_P001 Maize extracellular 34.68 47.52
Zm00001d004371_P001 Maize extracellular 34.89 47.26
Zm00001d035689_P001 Maize extracellular 37.87 47.21
Zm00001d004355_P001 Maize extracellular 34.26 46.94
Zm00001d045708_P001 Maize extracellular 32.77 46.81
Zm00001d036542_P001 Maize endoplasmic reticulum, golgi 39.79 46.06
Zm00001d013261_P001 Maize extracellular 33.19 45.75
Zm00001d012120_P001 Maize endoplasmic reticulum 36.81 45.65
Zm00001d007464_P001 Maize endoplasmic reticulum 37.23 45.57
Zm00001d031971_P002 Maize endoplasmic reticulum 33.4 45.38
Zm00001d038650_P001 Maize extracellular 44.04 45.0
Zm00001d017834_P001 Maize extracellular 28.94 43.73
Protein Annotations
EntrezGene:100283826Gene3D:3.10.20.500Gene3D:3.90.70.10MapMan:50.3.4ProteinID:AQK47112.1ProteinID:AQK47113.1
UniProt:B4FS90EMBL:BT039978EMBL:BT041479MEROPS:C01.029EMBL:EU966090GO:GO:0003674
GO:GO:0003824GO:GO:0006508GO:GO:0008150GO:GO:0008152GO:GO:0008233GO:GO:0008234
GO:GO:0016787GO:GO:0019538InterPro:GranulinInterPro:Granulin_sfInterPro:IPR037277PFAM:PF00112
PFAM:PF00396PFAM:PF08246PRINTS:PR00705ScanProsite:PS00139ScanProsite:PS00639ScanProsite:PS00640
PANTHER:PTHR12411PANTHER:PTHR12411:SF343InterPro:Papain_like_cys_pep_sfInterPro:Pept_asp_ASInterPro:Pept_cys_ASInterPro:Pept_his_AS
InterPro:Peptidase_C1AInterPro:Peptidase_C1A_CInterPro:Prot_inhib_I29SMART:SM00277SMART:SM00645SMART:SM00848
SUPFAM:SSF54001SUPFAM:SSF57277SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI00017B7BFCEnsemblPlantsGene:Zm00001d026577
EnsemblPlants:Zm00001d026577_P001EnsemblPlants:Zm00001d026577_T001SEG:seg:::
Description
Probable cysteine protease RD21B
Coordinates
chr10:-:148261491..148265297
Molecular Weight (calculated)
50230.2 Da
IEP (calculated)
5.360
GRAVY (calculated)
-0.260
Length
470 amino acids
Sequence
(BLAST)
001: MAALGRGLPL LLLLLLLAVS GAANAAAAPG GMSIITYNEE HGARGLERTE PEVRAMYDLW LAEHGRAYNA LGEGEGERDR RFLVFWDNLR FVDAHNERAG
101: ARGFRLGMNQ FADLTNDEFR AAYLGAMVPA ARRGAVVGER YRHDGAAEEL PESVDWREKG AVAPVKNQGQ CGSCWAFSAV SSVESVNQIV TGEMVTLSEQ
201: ELVECSTDGG NSGCNGGLMD AAFDFIIKNG GIDTEDDYPY RAVDGKCDMN RKNARVVSID GFEDVPENDE KSLQKAVAHQ PVSVAIEAGG REFQLYKSGV
301: FSGSCTTNLD HGVVAVGYGA ENGKDYWIVR NSWGPKWGEA GYIRMERNVN ASTGKCGIAM MASYPTKKGA NPPRPSPTPP TPPAAPDNVC DENFSCSAGS
401: TCCCAFGFRN VCLVWGCCPV EGATCCKDHA SCCPPGYPVC NVRAGTCSVS KNSPLSVKAL KRTLAKLSTA
Best Arabidopsis Sequence Match ( AT1G47128.1 )
(BLAST)
001: MGFLKPTMAI LFLAMVAVSS AVDMSIISYD EKHGVSTTGG RSEAEVMSIY EAWLVKHGKA QSQNSLVEKD RRFEIFKDNL RFVDEHNEKN LSYRLGLTRF
101: ADLTNDEYRS KYLGAKMEKK GERRTSLRYE ARVGDELPES IDWRKKGAVA EVKDQGGCGS CWAFSTIGAV EGINQIVTGD LITLSEQELV DCDTSYNEGC
201: NGGLMDYAFE FIIKNGGIDT DKDYPYKGVD GTCDQIRKNA KVVTIDSYED VPTYSEESLK KAVAHQPISI AIEAGGRAFQ LYDSGIFDGS CGTQLDHGVV
301: AVGYGTENGK DYWIVRNSWG KSWGESGYLR MARNIASSSG KCGIAIEPSY PIKNGENPPN PGPSPPSPIK PPTQCDSYYT CPESNTCCCL FEYGKYCFAW
401: GCCPLEAATC CDDNYSCCPH EYPVCDLDQG TCLLSKNSPF SVKALKRKPA TPFWSQGRKN IA
Arabidopsis Description
RD21ARD21A [Source:UniProtKB/TrEMBL;Acc:A0A178WIH7]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.