Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- golgi 5
- plasma membrane 5
- endoplasmic reticulum 6
- vacuole 8
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g093040.2.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 93.63 | 93.11 |
| PGSC0003DMT400053921 | Potato | extracellular | 71.75 | 71.15 |
| VIT_07s0031g00050.t01 | Wine grape | nucleus | 63.16 | 69.09 |
| KRH57968 | Soybean | endoplasmic reticulum | 66.76 | 65.85 |
| KRH04538 | Soybean | extracellular | 65.93 | 65.03 |
| KRH07581 | Soybean | endoplasmic reticulum | 65.37 | 64.48 |
| PGSC0003DMT400086163 | Potato | cytosol | 37.12 | 57.51 |
| CDX75633 | Canola | vacuole | 58.45 | 56.42 |
| AT4G36880.1 | Thale cress | vacuole | 58.45 | 56.12 |
| Bra011746.1-P | Field mustard | vacuole | 57.89 | 55.88 |
| CDY22445 | Canola | vacuole | 57.89 | 55.88 |
| Bra010592.1-P | Field mustard | extracellular, golgi, vacuole | 57.34 | 55.35 |
| CDX69285 | Canola | endoplasmic reticulum, vacuole | 56.79 | 54.81 |
| CDY44047 | Canola | vacuole | 57.06 | 53.65 |
| PGSC0003DMT400075600 | Potato | vacuole | 50.42 | 52.15 |
| PGSC0003DMT400025691 | Potato | endoplasmic reticulum, extracellular | 51.25 | 51.97 |
| PGSC0003DMT400012881 | Potato | endoplasmic reticulum | 48.2 | 51.18 |
| PGSC0003DMT400026461 | Potato | extracellular | 47.92 | 50.88 |
| PGSC0003DMT400012877 | Potato | endoplasmic reticulum, extracellular, vacuole | 47.92 | 50.88 |
| PGSC0003DMT400026457 | Potato | extracellular | 43.49 | 50.0 |
| PGSC0003DMT400012885 | Potato | extracellular | 42.38 | 49.51 |
| PGSC0003DMT400066566 | Potato | endoplasmic reticulum | 62.05 | 47.66 |
| PGSC0003DMT400026448 | Potato | endoplasmic reticulum, extracellular, vacuole | 45.71 | 47.55 |
| PGSC0003DMT400027975 | Potato | endoplasmic reticulum | 46.26 | 46.78 |
| PGSC0003DMT400039210 | Potato | endoplasmic reticulum | 46.54 | 46.67 |
| Zm00001d001900_P002 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 59.56 | 46.24 |
| PGSC0003DMT400020654 | Potato | cytosol | 55.96 | 45.6 |
| Zm00001d026577_P001 | Maize | extracellular, golgi, plasma membrane | 59.28 | 45.53 |
| EES13064 | Sorghum | extracellular, plasma membrane, vacuole | 58.73 | 45.4 |
| TraesCS2D01G547600.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 46.26 | 45.38 |
| TraesCS2A01G545700.1 | Wheat | unclear | 57.06 | 43.64 |
| TraesCS2D01G546600.1 | Wheat | plasma membrane, vacuole | 57.34 | 43.58 |
| TraesCS2B01G576300.1 | Wheat | unclear | 56.51 | 43.5 |
| PGSC0003DMT400026491 | Potato | nucleus | 36.01 | 43.05 |
| Os04t0670200-02 | Rice | extracellular | 57.89 | 42.48 |
| TraesCS2B01G577500.1 | Wheat | endoplasmic reticulum | 54.57 | 42.09 |
| TraesCS2B01G577300.1 | Wheat | extracellular, golgi | 54.57 | 42.0 |
| TraesCS5D01G149800.1 | Wheat | endoplasmic reticulum | 54.29 | 41.88 |
| TraesCS2D01G547800.1 | Wheat | endoplasmic reticulum, extracellular | 54.02 | 41.67 |
| HORVU7Hr1G055310.1 | Barley | extracellular | 53.74 | 41.54 |
| EES11628 | Sorghum | extracellular | 54.02 | 41.4 |
| PGSC0003DMT400026493 | Potato | extracellular, golgi, vacuole | 39.34 | 41.28 |
| TraesCS7B01G162200.1 | Wheat | endoplasmic reticulum | 52.63 | 41.21 |
| TraesCS2A01G546300.1 | Wheat | endoplasmic reticulum, vacuole | 53.19 | 40.94 |
| TraesCS7A01G264200.1 | Wheat | endoplasmic reticulum | 53.74 | 40.93 |
| TraesCS2A01G546700.1 | Wheat | endoplasmic reticulum | 52.91 | 40.81 |
| Os04t0670500-01 | Rice | extracellular | 54.85 | 40.41 |
| PGSC0003DMT400011188 | Potato | endoplasmic reticulum | 38.5 | 39.94 |
| HORVU2Hr1G121150.1 | Barley | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 53.19 | 39.51 |
| HORVU2Hr1G121440.2 | Barley | endoplasmic reticulum | 54.29 | 39.2 |
| PGSC0003DMT400026464 | Potato | endoplasmic reticulum, extracellular | 37.12 | 38.95 |
| TraesCS7D01G265100.1 | Wheat | cytosol, nucleus, plastid | 26.59 | 37.21 |
| PGSC0003DMT400009624 | Potato | extracellular | 43.21 | 35.54 |
Protein Annotations
| EntrezGene:102579033 | Gene3D:3.90.70.10 | MapMan:50.3.4 | MEROPS:C01.029 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0008234 | GO:GO:0016787 |
| GO:GO:0019538 | UniProt:M1CC54 | PFAM:PF00112 | PFAM:PF08246 | EnsemblPlantsGene:PGSC0003DMG400024987 | PGSC:PGSC0003DMG400024987 |
| EnsemblPlants:PGSC0003DMT400064314 | PRINTS:PR00705 | ScanProsite:PS00139 | ScanProsite:PS00639 | ScanProsite:PS00640 | PANTHER:PTHR12411 |
| PANTHER:PTHR12411:SF526 | InterPro:Papain_like_cys_pep_sf | InterPro:Pept_asp_AS | InterPro:Pept_cys_AS | InterPro:Pept_his_AS | InterPro:Peptidase_C1A |
| InterPro:Peptidase_C1A_C | InterPro:Prot_inhib_I29 | SMART:SM00645 | SMART:SM00848 | SUPFAM:SSF54001 | SignalP:SignalP-noTM |
| UniParc:UPI000294901B | RefSeq:XP_006339859.1 | : | : | : | : |
Description
Cysteine proteinase [Source:PGSC_GENE;Acc:PGSC0003DMG400024987]
Coordinates
chr2:-:43403044..43404674
Molecular Weight (calculated)
40571.0 Da
IEP (calculated)
6.998
GRAVY (calculated)
-0.460
Length
361 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKTVITTLL LALFWSLSYA IDMSIIDYKN KEGIIYEKWL AEHGKVYNAL GENEKRFEIF KDNLRFIEEY NNSENRTYKV GLNQFADLTN VEYRAMYLGT
101: RSDARRRLVK SKNTSQRYAS RPNELLPQSV DWRKRGAVAP IKNQGSCGSC WAFSTVAAVE GINQIITGEM ITLSEQELVD CDRAQNVGCN GGLMDYAFEF
201: IISNGGMDTE NHYPYSGVDG RCDPIRKNSK VVSIDDYEDV PRNEKALQKA VAHQPVSVAI EASGRAFQLY TSGVFTGECG EKVDHGVVVV GYGSEDGKDY
301: WLVRNSWGTK WGESGYVKME RNVKNGHLGK CGIMTEASYP IKEAINKRII TTSKEEKISS I
101: RSDARRRLVK SKNTSQRYAS RPNELLPQSV DWRKRGAVAP IKNQGSCGSC WAFSTVAAVE GINQIITGEM ITLSEQELVD CDRAQNVGCN GGLMDYAFEF
201: IISNGGMDTE NHYPYSGVDG RCDPIRKNSK VVSIDDYEDV PRNEKALQKA VAHQPVSVAI EASGRAFQLY TSGVFTGECG EKVDHGVVVV GYGSEDGKDY
301: WLVRNSWGTK WGESGYVKME RNVKNGHLGK CGIMTEASYP IKEAINKRII TTSKEEKISS I
001: MGFLKLSPMI LLLAMIGVSY AMDMSIISYD ENHHITTETS RSDSEVERIY EAWMVEHGKK KMNQNGLGAE KDQRFEIFKD NLRFIDEHNT KNLSYKLGLT
101: RFADLTNEEY RSMYLGAKPT KRVLKTSDRY QARVGDALPD SVDWRKEGAV ADVKDQGSCG SCWAFSTIGA VEGINKIVTG DLISLSEQEL VDCDTSYNQG
201: CNGGLMDYAF EFIIKNGGID TEADYPYKAA DGRCDQNRKN AKVVTIDSYE DVPENSEASL KKALAHQPIS VAIEAGGRAF QLYSSGVFDG LCGTELDHGV
301: VAVGYGTENG KDYWIVRNSW GNRWGESGYI KMARNIEAPT GKCGIAMEAS YPIKKGQNPP NPGPSPPSPI KPPTTCDKYF SCPESNTCCC LYKYGKYCFG
401: WGCCPLEAAT CCDDNSSCCP HEYPVCDVNR GTCLMSKNSP FSVKALKRTP AIPFWAKSRK HIA
101: RFADLTNEEY RSMYLGAKPT KRVLKTSDRY QARVGDALPD SVDWRKEGAV ADVKDQGSCG SCWAFSTIGA VEGINKIVTG DLISLSEQEL VDCDTSYNQG
201: CNGGLMDYAF EFIIKNGGID TEADYPYKAA DGRCDQNRKN AKVVTIDSYE DVPENSEASL KKALAHQPIS VAIEAGGRAF QLYSSGVFDG LCGTELDHGV
301: VAVGYGTENG KDYWIVRNSW GNRWGESGYI KMARNIEAPT GKCGIAMEAS YPIKKGQNPP NPGPSPPSPI KPPTTCDKYF SCPESNTCCC LYKYGKYCFG
401: WGCCPLEAAT CCDDNSSCCP HEYPVCDVNR GTCLMSKNSP FSVKALKRTP AIPFWAKSRK HIA
Arabidopsis Description
RD21BProbable cysteine protease RD21B [Source:UniProtKB/Swiss-Prot;Acc:Q9FMH8]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.