Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g044230.1.1 | Tomato | extracellular | 89.29 | 85.75 |
| PGSC0003DMT400064314 | Potato | endoplasmic reticulum, extracellular, vacuole | 71.15 | 71.75 |
| VIT_07s0031g00050.t01 | Wine grape | nucleus | 62.09 | 68.48 |
| KRH57968 | Soybean | endoplasmic reticulum | 65.38 | 65.03 |
| KRH04538 | Soybean | extracellular | 64.84 | 64.48 |
| KRH07581 | Soybean | endoplasmic reticulum | 64.84 | 64.48 |
| PGSC0003DMT400086163 | Potato | cytosol | 38.19 | 59.66 |
| Bra010592.1-P | Field mustard | extracellular, golgi, vacuole | 60.44 | 58.82 |
| CDY22445 | Canola | vacuole | 60.16 | 58.56 |
| CDX75633 | Canola | vacuole | 59.89 | 58.29 |
| AT4G36880.1 | Thale cress | vacuole | 59.89 | 57.98 |
| Bra011746.1-P | Field mustard | vacuole | 59.34 | 57.75 |
| CDY44047 | Canola | vacuole | 60.16 | 57.03 |
| CDX69285 | Canola | endoplasmic reticulum, vacuole | 58.52 | 56.95 |
| PGSC0003DMT400075600 | Potato | vacuole | 50.27 | 52.44 |
| PGSC0003DMT400026457 | Potato | extracellular | 43.96 | 50.96 |
| PGSC0003DMT400012877 | Potato | endoplasmic reticulum, extracellular, vacuole | 47.25 | 50.59 |
| PGSC0003DMT400012881 | Potato | endoplasmic reticulum | 47.25 | 50.59 |
| PGSC0003DMT400025691 | Potato | endoplasmic reticulum, extracellular | 49.45 | 50.56 |
| PGSC0003DMT400039210 | Potato | endoplasmic reticulum | 49.45 | 50.0 |
| PGSC0003DMT400026461 | Potato | extracellular | 46.7 | 50.0 |
| PGSC0003DMT400012885 | Potato | extracellular | 41.76 | 49.19 |
| PGSC0003DMT400066566 | Potato | endoplasmic reticulum | 63.46 | 49.15 |
| PGSC0003DMT400026448 | Potato | endoplasmic reticulum, extracellular, vacuole | 45.05 | 47.26 |
| PGSC0003DMT400020654 | Potato | cytosol | 56.59 | 46.5 |
| PGSC0003DMT400027975 | Potato | endoplasmic reticulum | 45.6 | 46.5 |
| TraesCS2D01G547600.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 46.15 | 45.65 |
| PGSC0003DMT400026491 | Potato | nucleus | 37.64 | 45.36 |
| Zm00001d001900_P002 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 57.69 | 45.16 |
| EES13064 | Sorghum | extracellular, plasma membrane, vacuole | 57.69 | 44.97 |
| Zm00001d026577_P001 | Maize | extracellular, golgi, plasma membrane | 56.59 | 43.83 |
| TraesCS2D01G546600.1 | Wheat | plasma membrane, vacuole | 57.14 | 43.79 |
| TraesCS2B01G576300.1 | Wheat | unclear | 56.32 | 43.71 |
| TraesCS2A01G545700.1 | Wheat | unclear | 56.59 | 43.64 |
| Os04t0670200-02 | Rice | extracellular | 56.87 | 42.07 |
| PGSC0003DMT400026493 | Potato | extracellular, golgi, vacuole | 39.29 | 41.57 |
| TraesCS7B01G162200.1 | Wheat | endoplasmic reticulum | 52.47 | 41.43 |
| PGSC0003DMT400011188 | Potato | endoplasmic reticulum | 39.56 | 41.38 |
| TraesCS2B01G577300.1 | Wheat | extracellular, golgi | 53.3 | 41.36 |
| HORVU7Hr1G055310.1 | Barley | extracellular | 53.02 | 41.33 |
| TraesCS2B01G577500.1 | Wheat | endoplasmic reticulum | 53.02 | 41.24 |
| TraesCS5D01G149800.1 | Wheat | endoplasmic reticulum | 52.75 | 41.03 |
| TraesCS2A01G546700.1 | Wheat | endoplasmic reticulum | 52.47 | 40.81 |
| TraesCS2D01G547800.1 | Wheat | endoplasmic reticulum, extracellular | 52.47 | 40.81 |
| TraesCS2A01G546300.1 | Wheat | endoplasmic reticulum, vacuole | 52.2 | 40.51 |
| TraesCS7A01G264200.1 | Wheat | endoplasmic reticulum | 52.75 | 40.51 |
| EES11628 | Sorghum | extracellular | 51.92 | 40.13 |
| PGSC0003DMT400026464 | Potato | endoplasmic reticulum, extracellular | 37.91 | 40.12 |
| Os04t0670500-01 | Rice | extracellular | 53.57 | 39.8 |
| HORVU2Hr1G121440.2 | Barley | endoplasmic reticulum | 54.12 | 39.4 |
| HORVU2Hr1G121150.1 | Barley | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 52.47 | 39.3 |
| TraesCS7D01G265100.1 | Wheat | cytosol, nucleus, plastid | 27.75 | 39.15 |
| PGSC0003DMT400009624 | Potato | extracellular | 43.96 | 36.45 |
Protein Annotations
| EntrezGene:102590617 | Gene3D:3.90.70.10 | MapMan:50.3.4 | MEROPS:C01.029 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0008234 | GO:GO:0016787 |
| GO:GO:0019538 | UniProt:M1BVM5 | PFAM:PF00112 | PFAM:PF08246 | EnsemblPlantsGene:PGSC0003DMG400020920 | PGSC:PGSC0003DMG400020920 |
| EnsemblPlants:PGSC0003DMT400053921 | PRINTS:PR00705 | ScanProsite:PS00139 | ScanProsite:PS00639 | ScanProsite:PS00640 | PANTHER:PTHR12411 |
| PANTHER:PTHR12411:SF526 | InterPro:Papain_like_cys_pep_sf | InterPro:Pept_asp_AS | InterPro:Pept_cys_AS | InterPro:Pept_his_AS | InterPro:Peptidase_C1A |
| InterPro:Peptidase_C1A_C | InterPro:Prot_inhib_I29 | SMART:SM00645 | SMART:SM00848 | SUPFAM:SSF54001 | SignalP:SignalP-noTM |
| UniParc:UPI0002968BFA | RefSeq:XP_015162324.1 | SEG:seg | : | : | : |
Description
Cysteine proteinase [Source:PGSC_GENE;Acc:PGSC0003DMG400020920]
Coordinates
chr3:-:7649521..7653362
Molecular Weight (calculated)
40734.0 Da
IEP (calculated)
5.279
GRAVY (calculated)
-0.353
Length
364 amino acids
Sequence
(BLAST)
(BLAST)
001: MSIVVITTSL LIFFAYLTNA NDMFYNNNNN NNIDEEVKGI YEIWLVEHGK IYNGLGEKGK RFEIFKDNLR FIEEHNNLKN QTYVLGLNRF ADLTNEEYRT
101: MFLGTRSDAR RRLVKSKNAS HRYVFRASDH VPESVDWRKK GAVAPIKDQG SCGSCWAFST VAAVEGINQI STGEMITLSE QELVDCDTMY NDGCNGGLMD
201: YAFQFIISNG GIDTESHYPY KGIDHKCDLV RKNAKVVSID DYEDVPANEN ALEKAVAHQP ISVAIEASGR VFQLYSSGIF TGKCGTQLDH GVVVVGYGTE
301: NGVDYWIVRN SWGTNWGEDG YIKMEKNIEA TNSGKCGIAM MASYPIKNAI NKITMGEDGI IRST
101: MFLGTRSDAR RRLVKSKNAS HRYVFRASDH VPESVDWRKK GAVAPIKDQG SCGSCWAFST VAAVEGINQI STGEMITLSE QELVDCDTMY NDGCNGGLMD
201: YAFQFIISNG GIDTESHYPY KGIDHKCDLV RKNAKVVSID DYEDVPANEN ALEKAVAHQP ISVAIEASGR VFQLYSSGIF TGKCGTQLDH GVVVVGYGTE
301: NGVDYWIVRN SWGTNWGEDG YIKMEKNIEA TNSGKCGIAM MASYPIKNAI NKITMGEDGI IRST
001: MGFLKLSPMI LLLAMIGVSY AMDMSIISYD ENHHITTETS RSDSEVERIY EAWMVEHGKK KMNQNGLGAE KDQRFEIFKD NLRFIDEHNT KNLSYKLGLT
101: RFADLTNEEY RSMYLGAKPT KRVLKTSDRY QARVGDALPD SVDWRKEGAV ADVKDQGSCG SCWAFSTIGA VEGINKIVTG DLISLSEQEL VDCDTSYNQG
201: CNGGLMDYAF EFIIKNGGID TEADYPYKAA DGRCDQNRKN AKVVTIDSYE DVPENSEASL KKALAHQPIS VAIEAGGRAF QLYSSGVFDG LCGTELDHGV
301: VAVGYGTENG KDYWIVRNSW GNRWGESGYI KMARNIEAPT GKCGIAMEAS YPIKKGQNPP NPGPSPPSPI KPPTTCDKYF SCPESNTCCC LYKYGKYCFG
401: WGCCPLEAAT CCDDNSSCCP HEYPVCDVNR GTCLMSKNSP FSVKALKRTP AIPFWAKSRK HIA
101: RFADLTNEEY RSMYLGAKPT KRVLKTSDRY QARVGDALPD SVDWRKEGAV ADVKDQGSCG SCWAFSTIGA VEGINKIVTG DLISLSEQEL VDCDTSYNQG
201: CNGGLMDYAF EFIIKNGGID TEADYPYKAA DGRCDQNRKN AKVVTIDSYE DVPENSEASL KKALAHQPIS VAIEAGGRAF QLYSSGVFDG LCGTELDHGV
301: VAVGYGTENG KDYWIVRNSW GNRWGESGYI KMARNIEAPT GKCGIAMEAS YPIKKGQNPP NPGPSPPSPI KPPTTCDKYF SCPESNTCCC LYKYGKYCFG
401: WGCCPLEAAT CCDDNSSCCP HEYPVCDVNR GTCLMSKNSP FSVKALKRTP AIPFWAKSRK HIA
Arabidopsis Description
RD21BProbable cysteine protease RD21B [Source:UniProtKB/Swiss-Prot;Acc:Q9FMH8]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.