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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, endoplasmic reticulum

Predictor Summary:
  • extracellular 6
  • golgi 5
  • plasma membrane 5
  • endoplasmic reticulum 6
  • vacuole 7
  • cytosol 1
PPI

Inferred distinct locusB in Crop

locusBlocations
PGSC0003DMT400003265

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G20850.1 PGSC0003DMT400003265 AT3G01340.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc04g082710.2.1 Tomato cytosol 82.87 96.72
PGSC0003DMT400075600 Potato vacuole 81.74 83.38
KRH60879 Soybean endoplasmic reticulum 75.28 76.79
KRH60878 Soybean endoplasmic reticulum 75.0 76.5
VIT_03s0038g04000.t01 Wine grape vacuole 75.28 76.14
KRH51560 Soybean endoplasmic reticulum 74.44 75.71
KRH51561 Soybean endoplasmic reticulum 74.16 75.43
Bra016447.1-P Field mustard endoplasmic reticulum, golgi, vacuole 71.63 71.23
CDY31861 Canola endoplasmic reticulum 70.51 71.1
AT1G20850.1 Thale cress endoplasmic reticulum 70.79 70.79
CDY01351 Canola endoplasmic reticulum 69.66 70.66
CDX96617 Canola endoplasmic reticulum 64.89 70.64
CDY33651 Canola endoplasmic reticulum 64.04 69.94
Bra012252.1-P Field mustard endoplasmic reticulum 69.1 69.89
TraesCS1D01G026500.1 Wheat endoplasmic reticulum 66.29 67.24
TraesCS1B01G033200.1 Wheat endoplasmic reticulum, extracellular, golgi 66.01 66.76
TraesCS1A01G027300.1 Wheat endoplasmic reticulum 65.73 66.67
GSMUA_Achr3P03740_001 Banana endoplasmic reticulum 65.73 66.29
TraesCS5D01G152400.1 Wheat endoplasmic reticulum, golgi, vacuole 65.17 65.17
TraesCS5B01G138300.1 Wheat endoplasmic reticulum, golgi, vacuole 64.61 64.61
Os05t0108600-01 Rice extracellular 64.89 64.53
KXG21060 Sorghum endoplasmic reticulum, golgi, vacuole 66.29 63.61
Os01t0971400-01 Rice extracellular 64.33 62.74
EES02142 Sorghum vacuole 65.17 61.38
TraesCS5A01G138700.1 Wheat plastid 64.61 61.01
Zm00001d011787_P001 Maize extracellular 65.17 60.26
Zm00001d035689_P001 Maize extracellular 63.76 60.21
EES07368 Sorghum extracellular 57.02 57.02
TraesCS6B01G308300.1 Wheat extracellular, vacuole 57.3 56.82
PGSC0003DMT400086163 Potato cytosol 37.08 56.65
Os02t0715000-01 Rice endoplasmic reticulum 58.15 56.56
CDY31498 Canola cytosol 47.47 56.52
TraesCS6A01G279500.1 Wheat endoplasmic reticulum, extracellular 56.18 55.56
Zm00001d017834_P001 Maize extracellular 48.31 55.31
HORVU6Hr1G070320.2 Barley endoplasmic reticulum, extracellular 55.62 54.4
HORVU1Hr1G003940.6 Barley endoplasmic reticulum 53.93 52.03
PGSC0003DMT400026457 Potato extracellular 45.51 51.59
TraesCS6D01G259900.1 Wheat plastid 54.78 51.59
PGSC0003DMT400064314 Potato endoplasmic reticulum, extracellular, vacuole 51.97 51.25
PGSC0003DMT400012877 Potato endoplasmic reticulum, extracellular, vacuole 48.6 50.88
PGSC0003DMT400026461 Potato extracellular 48.31 50.59
PGSC0003DMT400012881 Potato endoplasmic reticulum 48.31 50.59
PGSC0003DMT400012885 Potato extracellular 43.26 49.84
PGSC0003DMT400053921 Potato extracellular 50.56 49.45
PGSC0003DMT400039210 Potato endoplasmic reticulum 48.88 48.33
PGSC0003DMT400026448 Potato endoplasmic reticulum, extracellular, vacuole 45.79 46.97
PGSC0003DMT400027975 Potato endoplasmic reticulum 46.63 46.5
PGSC0003DMT400026491 Potato nucleus 38.2 45.03
PGSC0003DMT400026464 Potato endoplasmic reticulum, extracellular 42.42 43.9
PGSC0003DMT400026493 Potato extracellular, golgi, vacuole 40.73 42.15
PGSC0003DMT400066566 Potato endoplasmic reticulum 54.78 41.49
PGSC0003DMT400011188 Potato endoplasmic reticulum 39.33 40.23
PGSC0003DMT400020654 Potato cytosol 49.44 39.73
PGSC0003DMT400009624 Potato extracellular 46.07 37.36
Protein Annotations
EntrezGene:102580817MapMan:19.4.1.1MapMan:27.2.10Gene3D:3.90.70.10MEROPS:C01.065GO:GO:0003674
GO:GO:0003824GO:GO:0006508GO:GO:0008150GO:GO:0008152GO:GO:0008233GO:GO:0008234
GO:GO:0016787GO:GO:0019538UniProt:M1ALV7PFAM:PF00112PFAM:PF08246EnsemblPlantsGene:PGSC0003DMG400009921
PGSC:PGSC0003DMG400009921EnsemblPlants:PGSC0003DMT400025691PRINTS:PR00705ScanProsite:PS00139ScanProsite:PS00640PANTHER:PTHR12411
PANTHER:PTHR12411:SF357InterPro:Papain_like_cys_pep_sfInterPro:Pept_asp_ASInterPro:Pept_cys_ASInterPro:Peptidase_C1AInterPro:Peptidase_C1A_C
InterPro:Prot_inhib_I29SMART:SM00645SMART:SM00848SUPFAM:SSF54001SignalP:SignalP-noTMUniParc:UPI0002954164
RefSeq:XP_006342169.1SEG:seg::::
Description
Cysteine protease 14 [Source:PGSC_GENE;Acc:PGSC0003DMG400009921]
Coordinates
chr4:+:71882747..71884327
Molecular Weight (calculated)
40144.5 Da
IEP (calculated)
5.458
GRAVY (calculated)
-0.407
Length
356 amino acids
Sequence
(BLAST)
001: MALFSFTKFS LLVLFSISLL ACTSLARDHS IIGYSSDDLT CIDKLINLFD KWMDKHGKIY KSIEEKLHRF EIFKENLKHI DERNKIVTNY WLGVNEFSDL
101: SHDEFKKMYL GLKVDQDLLN KREQLSQEEF AYRDFVDLPK SVDWRKKGAV TPVKNQGQCG SCWAFSTVAA VEGINQIKTG NLTSLSEQEL IDCDTTYNNG
201: CNGGLMDYAF QFIVSNGGLH KEDDYPYLME EGTCDEKRDE SEVVTIDGYH DVPANDEQSL LKALANQPLS VAIEASTRDF QFYSGGVFDG HCGTDLDHGV
301: SAVGYGSTKG ADYIIVKNSW GPKWGEKGFI RMKRNTGKPE GLCGINKMVS FPLKKK
Best Arabidopsis Sequence Match ( AT4G35350.1 )
(BLAST)
001: MAFSAPSLSK FSLLVAISAS ALLCCAFARD FSIVGYTPEH LTNTDKLLEL FESWMSEHSK AYKSVEEKVH RFEVFRENLM HIDQRNNEIN SYWLGLNEFA
101: DLTHEEFKGR YLGLAKPQFS RKRQPSANFR YRDITDLPKS VDWRKKGAVA PVKDQGQCGS CWAFSTVAAV EGINQITTGN LSSLSEQELI DCDTTFNSGC
201: NGGLMDYAFQ YIISTGGLHK EDDYPYLMEE GICQEQKEDV ERVTISGYED VPENDDESLV KALAHQPVSV AIEASGRDFQ FYKGGVFNGK CGTDLDHGVA
301: AVGYGSSKGS DYVIVKNSWG PRWGEKGFIR MKRNTGKPEG LCGINKMASY PTKTK
Arabidopsis Description
XCP1Cysteine protease XCP1 [Source:UniProtKB/Swiss-Prot;Acc:O65493]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.