Skip to main content
crop-pal logo
Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 6
  • golgi 5
  • plasma membrane 5
  • endoplasmic reticulum 7
  • vacuole 7
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra039126.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G20850.1 Bra039126.1-P AT3G01340.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY01351 Canola endoplasmic reticulum 97.73 98.01
CDY31861 Canola endoplasmic reticulum 98.01 97.73
Bra016447.1-P Field mustard endoplasmic reticulum, golgi, vacuole 94.6 93.02
AT1G20850.1 Thale cress endoplasmic reticulum 92.61 91.57
KRH60879 Soybean endoplasmic reticulum 73.3 73.93
VIT_18s0122g00790.t01 Wine grape nucleus 70.45 73.81
Solyc04g082710.2.1 Tomato cytosol 63.64 73.44
KRH51560 Soybean endoplasmic reticulum 72.73 73.14
KRH51561 Soybean endoplasmic reticulum 72.73 73.14
KRH60878 Soybean endoplasmic reticulum 72.44 73.07
Solyc12g094700.1.1 Tomato extracellular 67.61 71.9
PGSC0003DMT400075600 Potato vacuole 68.75 69.34
PGSC0003DMT400025691 Potato endoplasmic reticulum, extracellular 69.89 69.1
Bra011608.1-P Field mustard endoplasmic reticulum 69.03 68.26
TraesCS1B01G033200.1 Wheat endoplasmic reticulum, extracellular, golgi 67.61 67.61
TraesCS1A01G027300.1 Wheat endoplasmic reticulum 67.33 67.52
TraesCS1D01G026500.1 Wheat endoplasmic reticulum 67.33 67.52
GSMUA_Achr3P03740_001 Banana endoplasmic reticulum 67.05 66.86
Os05t0108600-01 Rice extracellular 67.61 66.48
TraesCS5D01G152400.1 Wheat endoplasmic reticulum, golgi, vacuole 66.48 65.73
TraesCS5B01G138300.1 Wheat endoplasmic reticulum, golgi, vacuole 66.19 65.45
Os01t0971400-01 Rice extracellular 67.05 64.66
EES02142 Sorghum vacuole 67.61 62.96
KXG21060 Sorghum endoplasmic reticulum, golgi, vacuole 65.91 62.53
Zm00001d011787_P001 Maize extracellular 67.9 62.08
TraesCS5A01G138700.1 Wheat plastid 66.48 62.07
Zm00001d035689_P001 Maize extracellular 64.77 60.48
Os02t0715000-01 Rice endoplasmic reticulum 57.39 55.19
EES07368 Sorghum extracellular 55.11 54.49
TraesCS6A01G279500.1 Wheat endoplasmic reticulum, extracellular 55.4 54.17
TraesCS6B01G308300.1 Wheat extracellular, vacuole 55.11 54.04
Zm00001d017834_P001 Maize extracellular 47.16 53.38
HORVU6Hr1G070320.2 Barley endoplasmic reticulum, extracellular 55.11 53.3
HORVU1Hr1G003940.6 Barley endoplasmic reticulum 54.83 52.3
TraesCS6D01G259900.1 Wheat plastid 55.11 51.32
Bra000615.1-P Field mustard endoplasmic reticulum 51.99 50.69
Bra018067.1-P Field mustard endoplasmic reticulum 50.0 49.03
Bra013705.1-P Field mustard extracellular 44.6 47.87
Bra018066.1-P Field mustard endoplasmic reticulum 48.58 46.47
Bra025046.1-P Field mustard endoplasmic reticulum, extracellular 45.17 46.22
Bra021998.1-P Field mustard endoplasmic reticulum 44.6 45.38
Bra010592.1-P Field mustard extracellular, golgi, vacuole 48.01 45.19
Bra033146.1-P Field mustard vacuole 47.44 44.77
Bra033148.1-P Field mustard extracellular 47.16 44.74
Bra011746.1-P Field mustard vacuole 47.44 44.65
Bra024736.1-P Field mustard endoplasmic reticulum, extracellular 46.59 44.09
Bra040749.1-P Field mustard endoplasmic reticulum 52.84 40.7
Bra033657.1-P Field mustard extracellular 52.56 40.22
Bra014057.1-P Field mustard endoplasmic reticulum 51.7 39.65
Bra022418.1-P Field mustard endoplasmic reticulum 50.28 39.33
Bra038208.1-P Field mustard endoplasmic reticulum 48.01 38.32
Bra019982.1-P Field mustard extracellular, golgi 47.44 37.7
Bra038206.1-P Field mustard extracellular, plasma membrane, vacuole 48.01 37.56
Protein Annotations
MapMan:19.4.1.1MapMan:27.2.10Gene3D:3.90.70.10EnsemblPlantsGene:Bra012252EnsemblPlants:Bra012252.1EnsemblPlants:Bra012252.1-P
MEROPS:C01.120GO:GO:0003674GO:GO:0003824GO:GO:0006508GO:GO:0008150GO:GO:0008152
GO:GO:0008233GO:GO:0008234GO:GO:0016787GO:GO:0019538UniProt:M4D6Z2PFAM:PF00112
PFAM:PF08246PRINTS:PR00705ScanProsite:PS00139ScanProsite:PS00639ScanProsite:PS00640PANTHER:PTHR12411
PANTHER:PTHR12411:SF357InterPro:Papain_like_cys_pep_sfInterPro:Pept_asp_ASInterPro:Pept_cys_ASInterPro:Pept_his_ASInterPro:Peptidase_C1A
InterPro:Peptidase_C1A_CInterPro:Prot_inhib_I29SMART:SM00645SMART:SM00848SUPFAM:SSF54001SignalP:SignalP-noTM
UniParc:UPI0002541585SEG:seg::::
Description
AT1G20850 (E=3e-182) XCP2 | XCP2 (xylem cysteine peptidase 2); cysteine-type peptidase/ peptidase
Coordinates
chrA07:-:9072562..9073884
Molecular Weight (calculated)
39405.1 Da
IEP (calculated)
5.091
GRAVY (calculated)
-0.510
Length
352 amino acids
Sequence
(BLAST)
001: MATRICFLLA LTAASLSFSF AASHDFSIVG YAPEDLESHD KLIELFENWL SNFEKAYETV EEKFRRFEVF KDNLKHIDET NKKAKSYWLG LNEFADLSHE
101: EFKNKYVGLK TDIVRRNDDE RSYQEFAYKD VEALPKSVDW RKKGAVSYVK NQGSCGSCWA FSTVAAVEGI NKIVTGNLTT LSEQELIDCD TTCNNGCNGG
201: LMDYAFDYIV KNGGLRKEED YPYSMEEGTC ETQKDESEMV TINGHQDVPT NDEKSLLKAL AHQPLSVAID ASGREFQFYS GGVFDGRCGV DLDHGVAAVG
301: YGSSKGSDYI IVKNSWGPKW GEKGYIRMKR NTGKAEGLCG INKMASFPTK TK
Best Arabidopsis Sequence Match ( AT1G20850.1 )
(BLAST)
001: MALSSPSRIL CFALALSAAS LSLSFASSHD YSIVGYSPED LESHDKLIEL FENWISNFEK AYETVEEKFL RFEVFKDNLK HIDETNKKGK SYWLGLNEFA
101: DLSHEEFKKM YLGLKTDIVR RDEERSYAEF AYRDVEAVPK SVDWRKKGAV AEVKNQGSCG SCWAFSTVAA VEGINKIVTG NLTTLSEQEL IDCDTTYNNG
201: CNGGLMDYAF EYIVKNGGLR KEEDYPYSME EGTCEMQKDE SETVTINGHQ DVPTNDEKSL LKALAHQPLS VAIDASGREF QFYSGGVFDG RCGVDLDHGV
301: AAVGYGSSKG SDYIIVKNSW GPKWGEKGYI RLKRNTGKPE GLCGINKMAS FPTKTK
Arabidopsis Description
XCP2Cysteine protease XCP2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LM66]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.