Factsheet for Bra033148.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
vacuole 6
extracellular 6
endoplasmic reticulum 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	endoplasmic reticulum

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra002403.1-P
Bra006619.1-P
Bra012567.1-P
Bra013361.1-P
Bra020182.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G11310.1	Bra012567.1-P	AT4G19030.1	21798944
AT4G11310.1	Bra013361.1-P	AT4G19030.1	21798944
AT4G11310.1	Bra002403.1-P	AT5G22290.1	21798944
AT4G11310.1	Bra006619.1-P	AT5G22290.1	21798944
AT4G11310.1	Bra020182.1-P	AT5G22290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY25281	Canola	extracellular	100.0	100.0
AT4G11310.1	Thale cress	endoplasmic reticulum	84.1	85.71
AT4G11320.1	Thale cress	endoplasmic reticulum	84.91	84.91
Bra033146.1-P	Field mustard	vacuole	83.02	82.57
Bra024736.1-P	Field mustard	endoplasmic reticulum, extracellular	81.94	81.72
Bra013705.1-P	Field mustard	extracellular	48.79	55.18
Bra012252.1-P	Field mustard	endoplasmic reticulum	44.74	47.16
Bra016447.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	45.28	46.93
KXG20680	Sorghum	endoplasmic reticulum, extracellular, vacuole	44.2	45.81
Bra011746.1-P	Field mustard	vacuole	46.09	45.72
Bra011608.1-P	Field mustard	endoplasmic reticulum	43.13	44.94
Bra010592.1-P	Field mustard	extracellular, golgi, vacuole	45.01	44.65
EER88857	Sorghum	endoplasmic reticulum	43.4	43.28
Bra033657.1-P	Field mustard	extracellular	53.37	43.04
Bra040749.1-P	Field mustard	endoplasmic reticulum	52.29	42.45
Bra018067.1-P	Field mustard	endoplasmic reticulum	40.97	42.34
Bra014057.1-P	Field mustard	endoplasmic reticulum	51.48	41.61
Bra025046.1-P	Field mustard	endoplasmic reticulum, extracellular	38.54	41.57
Bra000615.1-P	Field mustard	endoplasmic reticulum	39.89	41.0
EER88858	Sorghum	golgi, vacuole	43.4	40.55
Bra018066.1-P	Field mustard	endoplasmic reticulum	39.62	39.95
Zm00001d036542_P001	Maize	endoplasmic reticulum, golgi	43.13	39.41
Bra021998.1-P	Field mustard	endoplasmic reticulum	36.12	38.73
Bra022418.1-P	Field mustard	endoplasmic reticulum	46.63	38.44
Bra038208.1-P	Field mustard	endoplasmic reticulum	44.2	37.19
Bra038206.1-P	Field mustard	extracellular, plasma membrane, vacuole	44.47	36.67
Zm00001d036541_P002	Maize	extracellular, plasma membrane	45.82	35.27
Bra019982.1-P	Field mustard	extracellular, golgi	41.24	34.54

Protein Annotations

Gene3D:3.90.70.10	MapMan:50.3.4	ProteinID:AAQ01576	ProteinID:AAQ01576.1	EMBL:AY337012	EnsemblPlantsGene:Bra033148
EnsemblPlants:Bra033148.1	EnsemblPlants:Bra033148.1-P	MEROPS:C01.064	GO:GO:0003674	GO:GO:0003824	GO:GO:0006508
GO:GO:0008150	GO:GO:0008152	GO:GO:0008234	GO:GO:0016787	GO:GO:0019538	UniProt:M4EWG4
PFAM:PF00112	PFAM:PF08246	PRINTS:PR00705	ScanProsite:PS00639	ScanProsite:PS00640	PFscan:PS51257
PANTHER:PTHR12411	PANTHER:PTHR12411:SF526	InterPro:Papain_like_cys_pep_sf	InterPro:Pept_asp_AS	InterPro:Pept_his_AS	InterPro:Peptidase_C1A
InterPro:Peptidase_C1A_C	InterPro:Prot_inhib_I29	SMART:SM00645	SMART:SM00848	SUPFAM:SSF54001	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI00025455BB	SEG:seg	:	:	:

Description

AT4G11320 (E=3e-178) | cysteine proteinase, putative

Coordinates

chrA02:-:16966951..16968621

Molecular Weight (calculated)

40685.0 Da

IEP (calculated)

5.886

GRAVY (calculated)

-0.362

Length

371 amino acids

Sequence
(BLAST)

001: MSSPKSATLI FLVSMGIASC AMAMDMSVVS YDDNHHVIGG PGRRNSGFDA EASLIFESWM VEQGKVYESV AEKERRLTIF EDNLRFITNR NAENLGYRLG
101: LTRFADLSLH EYGQICHGAD PRPPKDHVFM TSSNRYKTSA GDVLPKSVDW RKEGAVTKVK DQGHCRSCWA FSTVGAVEGL NKIVTGQLVT LSEQDLINCN
201: KENNGCEGGK VETAYEYIVT NGGLGTNNDY PYKAVNGVCD AGLKENNKNV MIDGYESLPS NDELSLMKAV AHQPVTAVID SSSREFQLYE SGIFDGTCGT
301: NLNHGVVVVG YGTENGRDYW IVRNSWGNTW GEAGYMKMAR NIANPRGLCG IAMRAAYPLK NSVSDDIRSM A

Best Arabidopsis Sequence Match ( AT4G11320.2 )
(BLAST)

001: MGYAKSAMLI FLLALVIASC ATAMDMSVVS SNDNHHVTAG PGRRQGIFDA EATLMFESWM VKHGKVYDSV AEKERRLTIF EDNLRFITNR NAENLSYRLG
101: LNRFADLSLH EYGEICHGAD PRPPRNHVFM TSSNRYKTSD GDVLPKSVDW RNEGAVTEVK DQGLCRSCWA FSTVGAVEGL NKIVTGELVT LSEQDLINCN
201: KENNGCGGGK VETAYEFIMN NGGLGTDNDY PYKALNGVCE GRLKEDNKNV MIDGYENLPA NDEAALMKAV AHQPVTAVVD SSSREFQLYE SGVFDGTCGT
301: NLNHGVVVVG YGTENGRDYW IVKNSRGDTW GEAGYMKMAR NIANPRGLCG IAMRASYPLK NSFSTDKVSV A

Arabidopsis Description

RDL5Probable cysteine protease RDL5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUS9]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.