Factsheet for Bra024736.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 7
plasma membrane 5
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra002403.1-P
Bra006619.1-P
Bra012567.1-P
Bra013361.1-P
Bra020182.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G11310.1	Bra012567.1-P	AT4G19030.1	21798944
AT4G11310.1	Bra013361.1-P	AT4G19030.1	21798944
AT4G11310.1	Bra002403.1-P	AT5G22290.1	21798944
AT4G11310.1	Bra006619.1-P	AT5G22290.1	21798944
AT4G11310.1	Bra020182.1-P	AT5G22290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY16132	Canola	endoplasmic reticulum, extracellular, vacuole	100.0	98.15
AT4G11310.1	Thale cress	endoplasmic reticulum	80.91	82.69
Bra033148.1-P	Field mustard	extracellular	81.72	81.94
AT4G11320.1	Thale cress	endoplasmic reticulum	80.65	80.86
Bra033146.1-P	Field mustard	vacuole	80.38	80.16
Bra013705.1-P	Field mustard	extracellular	47.58	53.96
Bra012252.1-P	Field mustard	endoplasmic reticulum	44.09	46.59
Bra016447.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	44.62	46.37
Bra011746.1-P	Field mustard	vacuole	45.7	45.45
Bra010592.1-P	Field mustard	extracellular, golgi, vacuole	44.62	44.38
KXG20680	Sorghum	endoplasmic reticulum, extracellular, vacuole	41.67	43.3
Bra011608.1-P	Field mustard	endoplasmic reticulum	40.59	42.42
Bra033657.1-P	Field mustard	extracellular	52.42	42.39
Bra040749.1-P	Field mustard	endoplasmic reticulum	51.61	42.01
Bra018067.1-P	Field mustard	endoplasmic reticulum	40.32	41.78
Bra014057.1-P	Field mustard	endoplasmic reticulum	50.81	41.18
Bra000615.1-P	Field mustard	endoplasmic reticulum	39.25	40.44
EER88857	Sorghum	endoplasmic reticulum	40.32	40.32
Bra025046.1-P	Field mustard	endoplasmic reticulum, extracellular	36.56	39.53
EER88858	Sorghum	golgi, vacuole	41.67	39.04
Bra018066.1-P	Field mustard	endoplasmic reticulum	38.44	38.86
Bra021998.1-P	Field mustard	endoplasmic reticulum	35.75	38.44
Zm00001d036542_P001	Maize	endoplasmic reticulum, golgi	41.67	38.18
Bra022418.1-P	Field mustard	endoplasmic reticulum	45.16	37.33
Bra038208.1-P	Field mustard	endoplasmic reticulum	42.2	35.6
Bra038206.1-P	Field mustard	extracellular, plasma membrane, vacuole	42.74	35.33
Zm00001d036541_P002	Maize	extracellular, plasma membrane	44.35	34.23
Bra019982.1-P	Field mustard	extracellular, golgi	39.78	33.41

Protein Annotations

Gene3D:3.90.70.10	MapMan:50.3.4	EnsemblPlantsGene:Bra024736	EnsemblPlants:Bra024736.1	EnsemblPlants:Bra024736.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008234	GO:GO:0016787
GO:GO:0019538	UniProt:M4E7I1	PFAM:PF00112	PFAM:PF08246	PRINTS:PR00705	ScanProsite:PS00639
ScanProsite:PS00640	PANTHER:PTHR12411	PANTHER:PTHR12411:SF526	InterPro:Papain_like_cys_pep_sf	InterPro:Pept_asp_AS	InterPro:Pept_his_AS
InterPro:Peptidase_C1A	InterPro:Peptidase_C1A_C	InterPro:Prot_inhib_I29	SMART:SM00645	SMART:SM00848	SUPFAM:SSF54001
SignalP:SignalP-noTM	UniParc:UPI0002542736	:	:	:	:

Description

AT4G11320 (E=2e-178) | cysteine proteinase, putative

Coordinates

chrA09:+:23206493..23207980

Molecular Weight (calculated)

41171.7 Da

IEP (calculated)

7.311

GRAVY (calculated)

-0.348

Length

372 amino acids

Sequence
(BLAST)

001: MRIFLLAMLI ASCATAMDMS VVSYDYNHHV VGSSGHRVAT GPSHSDSVFD AEAMLIFNSW MAKQGKVYNS VAEKERRLTI FKDNLRFITN RNAENLSYRL
101: GLTRFADISL HEYTELCHGA APKPPRNHVF MTSSDRYKTS AGDVLPKSVD WRNEGAMSEI KDQGHCRSCW AFSTVGAVEG LNKIVTGVLV TLSEQDLINC
201: NKDNNGCEGG KVETAYEFIV KNGGLGTTKD YPYKAVDGVC DAHLKENNKN FMIDGYENLP ANDEHALRKA VAHQPITAII DSSSREFQLY KSGVFDGTCG
301: TNLNHGVVVV GYGNEDGRDY WIVRNSWGNT WGEAGYMKMA RNIVNPRGLC GIAMRASYPL KNSISTDVRS MT

Best Arabidopsis Sequence Match ( AT4G11320.2 )
(BLAST)

001: MGYAKSAMLI FLLALVIASC ATAMDMSVVS SNDNHHVTAG PGRRQGIFDA EATLMFESWM VKHGKVYDSV AEKERRLTIF EDNLRFITNR NAENLSYRLG
101: LNRFADLSLH EYGEICHGAD PRPPRNHVFM TSSNRYKTSD GDVLPKSVDW RNEGAVTEVK DQGLCRSCWA FSTVGAVEGL NKIVTGELVT LSEQDLINCN
201: KENNGCGGGK VETAYEFIMN NGGLGTDNDY PYKALNGVCE GRLKEDNKNV MIDGYENLPA NDEAALMKAV AHQPVTAVVD SSSREFQLYE SGVFDGTCGT
301: NLNHGVVVVG YGTENGRDYW IVKNSRGDTW GEAGYMKMAR NIANPRGLCG IAMRASYPLK NSFSTDKVSV A

Arabidopsis Description

RDL5Probable cysteine protease RDL5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUS9]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.