Factsheet for Bra013705.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 8
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY63262	Canola	extracellular, plasma membrane, vacuole	69.21	91.53
AT4G23520.1	Thale cress	endoplasmic reticulum	70.43	64.89
Bra033148.1-P	Field mustard	extracellular	55.18	48.79
Bra033146.1-P	Field mustard	vacuole	55.18	48.53
Bra024736.1-P	Field mustard	endoplasmic reticulum, extracellular	53.96	47.58
Bra010592.1-P	Field mustard	extracellular, golgi, vacuole	53.05	46.52
Bra011746.1-P	Field mustard	vacuole	52.74	46.26
Bra011608.1-P	Field mustard	endoplasmic reticulum	48.78	44.94
Bra012252.1-P	Field mustard	endoplasmic reticulum	47.87	44.6
KXG20680	Sorghum	endoplasmic reticulum, extracellular, vacuole	47.87	43.85
Bra016447.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	47.26	43.3
Bra033657.1-P	Field mustard	extracellular	59.76	42.61
Bra040749.1-P	Field mustard	endoplasmic reticulum	59.15	42.45
Bra014057.1-P	Field mustard	endoplasmic reticulum	58.23	41.61
Bra018067.1-P	Field mustard	endoplasmic reticulum	45.12	41.23
EER88857	Sorghum	endoplasmic reticulum	46.65	41.13
Bra000615.1-P	Field mustard	endoplasmic reticulum	44.82	40.72
Bra025046.1-P	Field mustard	endoplasmic reticulum, extracellular	42.38	40.41
EER88858	Sorghum	golgi, vacuole	47.26	39.04
Bra021998.1-P	Field mustard	endoplasmic reticulum	40.85	38.73
Bra022418.1-P	Field mustard	endoplasmic reticulum	52.74	38.44
Bra018066.1-P	Field mustard	endoplasmic reticulum	42.68	38.04
Zm00001d036542_P001	Maize	endoplasmic reticulum, golgi	46.04	37.19
Bra038208.1-P	Field mustard	endoplasmic reticulum	50.0	37.19
Bra038206.1-P	Field mustard	extracellular, plasma membrane, vacuole	50.0	36.44
Bra019982.1-P	Field mustard	extracellular, golgi	46.95	34.76
Zm00001d036541_P002	Maize	extracellular, plasma membrane	48.48	32.99

Protein Annotations

Gene3D:3.90.70.10	MapMan:50.3.4	EnsemblPlantsGene:Bra013705	EnsemblPlants:Bra013705.1	EnsemblPlants:Bra013705.1-P	MEROPS:C01.A22
GO:GO:0003674	GO:GO:0003824	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008234
GO:GO:0016787	GO:GO:0019538	UniProt:M4DB45	PFAM:PF00112	PFAM:PF08246	PRINTS:PR00705
ScanProsite:PS00639	ScanProsite:PS00640	PANTHER:PTHR12411	PANTHER:PTHR12411:SF526	InterPro:Papain_like_cys_pep_sf	InterPro:Pept_asp_AS
InterPro:Pept_his_AS	InterPro:Peptidase_C1A	InterPro:Peptidase_C1A_C	InterPro:Prot_inhib_I29	SMART:SM00645	SMART:SM00848
SUPFAM:SSF54001	SignalP:SignalP-noTM	UniParc:UPI0002545CF0	SEG:seg	:	:

Description

AT4G23520 (E=2e-095) | cysteine proteinase, putative

Coordinates

chrA01:-:7273687..7275327

Molecular Weight (calculated)

36281.0 Da

IEP (calculated)

6.928

GRAVY (calculated)

-0.240

Length

328 amino acids

Sequence
(BLAST)

001: MTILFLLIIF FLSPSSAVDI PVVSHSGRRS NVEVGFIFQT WLSTHGKSYV NALGERQRRF EIFKDNLRFV DQHNAKNLSY QLGLTRFADL TVEEYGGLLS
101: GRHDNEPIQR ARRVSHRYVS LPGDQLPESV DWRKEGAVTA VKDQGSCSSC WAFSSVAAVE GINKIVTGEL ISLSEQQLVD CNTGNYGCDG RGYMDISFKF
201: LINNNIGLVS QIDYPYKAVQ GNCNHNEKSA NKVVKIDGYE DLPVNDEMSL KKAVAHQPGV YNGPCGTQLD HAVVIVGYGS ENGQDYWIVK NSWGTIWGEA
301: GFGKMARNIQ DPAGICGITL VASYPIKK

Best Arabidopsis Sequence Match ( AT4G23520.1 )
(BLAST)

001: MGFVRPVCMT ILFLLIVFVL SAPSSAMDLP ATSGGHNRSN EEVEFIFQMW MSKHGKTYTN ALGEKERRFQ NFKDNLRFID QHNAKNLSYQ LGLTRFADLT
101: VQEYRDLFPG SPKPKQRNLK TSRRYVPLAG DQLPESVDWR QEGAVSEIKD QGTCNSCWAF STVAAVEGLN KIVTGELISL SEQELVDCNL VNNGCYGSGL
201: MDTAFQFLIN NNGLDSEKDY PYQGTQGSCN RKQSTSNKVI TIDSYEDVPA NDEISLQKAV AHQPVSVGVD KKSQEFMLYR SCIYNGPCGT NLDHALVIVG
301: YGSENGQDYW IVRNSWGTTW GDAGYIKIAR NFEDPKGLCG IAMLASYPIK NSASNA

Arabidopsis Description

RDL6Probable cysteine protease RDL6 [Source:UniProtKB/Swiss-Prot;Acc:F4JNL3]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.