CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
golgi 5
plasma membrane 5
endoplasmic reticulum 7
vacuole 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER88858	Sorghum	golgi, vacuole	82.8	77.58
KXG20680	Sorghum	endoplasmic reticulum, extracellular, vacuole	64.78	67.32
Bra013705.1-P	Field mustard	extracellular	41.13	46.65
AT4G23520.1	Thale cress	endoplasmic reticulum	44.35	46.35
OQU81188	Sorghum	cytosol, nucleus, plastid	33.87	45.65
KXG25863	Sorghum	endoplasmic reticulum	41.13	45.4
KXG25862	Sorghum	endoplasmic reticulum	41.13	45.4
KXG25861	Sorghum	endoplasmic reticulum	41.13	45.4
KXG19778	Sorghum	cytosol, nucleus, plastid	37.37	45.13
EES10463	Sorghum	endoplasmic reticulum	40.86	44.97
EER93437	Sorghum	endoplasmic reticulum	42.47	44.76
EES10461	Sorghum	endoplasmic reticulum	40.59	44.67
EES09937	Sorghum	endoplasmic reticulum	44.35	44.47
KXG19777	Sorghum	extracellular	40.59	44.41
KXG27269	Sorghum	endoplasmic reticulum	55.11	44.18
EES01927	Sorghum	extracellular	43.82	44.17
EER89590	Sorghum	extracellular	40.32	44.12
EES10550	Sorghum	extracellular	40.32	44.12
KXG19775	Sorghum	extracellular	40.32	44.12
AT4G11310.1	Thale cress	endoplasmic reticulum	43.01	43.96
EES15197	Sorghum	endoplasmic reticulum	43.55	43.55
Bra033148.1-P	Field mustard	extracellular	43.28	43.4
CDY25281	Canola	extracellular	43.28	43.4
CDY37617	Canola	endoplasmic reticulum, extracellular	43.01	43.24
AT4G11320.1	Thale cress	endoplasmic reticulum	43.01	43.13
OQU81187	Sorghum	endoplasmic reticulum, extracellular	40.05	42.94
EES02142	Sorghum	vacuole	43.55	42.86
EER90747	Sorghum	endoplasmic reticulum	43.82	42.78
KXG21060	Sorghum	endoplasmic reticulum, golgi, vacuole	42.2	42.32
EES13064	Sorghum	extracellular, plasma membrane, vacuole	52.69	41.97
CDY25283	Canola	vacuole	41.94	41.82
Bra033146.1-P	Field mustard	vacuole	41.94	41.82
EES07368	Sorghum	extracellular	39.25	41.01
CDY63262	Canola	extracellular, plasma membrane, vacuole	27.15	40.73
Bra024736.1-P	Field mustard	endoplasmic reticulum, extracellular	40.32	40.32
CDY16132	Canola	endoplasmic reticulum, extracellular, vacuole	40.59	39.84
EES11628	Sorghum	extracellular	48.12	38.0
EES18460	Sorghum	endoplasmic reticulum	45.43	36.58

Protein Annotations

Gene3D:3.90.70.10	MapMan:50.3.4	EntrezGene:8063784	UniProt:C5Z8D2	EnsemblPlants:EER88857	ProteinID:EER88857
ProteinID:EER88857.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004197	GO:GO:0005575	GO:GO:0005576
GO:GO:0005615	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005764	GO:GO:0005773
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008234	GO:GO:0009056
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0051603	PFAM:PF00112	PFAM:PF08246
PRINTS:PR00705	ScanProsite:PS00139	ScanProsite:PS00639	ScanProsite:PS00640	PANTHER:PTHR12411	PANTHER:PTHR12411:SF526
InterPro:Papain_like_cys_pep_sf	InterPro:Pept_asp_AS	InterPro:Pept_cys_AS	InterPro:Pept_his_AS	InterPro:Peptidase_C1A	InterPro:Peptidase_C1A_C
InterPro:Prot_inhib_I29	SMART:SM00645	SMART:SM00848	EnsemblPlantsGene:SORBI_3010G239300	SUPFAM:SSF54001	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI0001A890D9	RefSeq:XP_002437490.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr10:+:58115872..58117973

Molecular Weight (calculated)

39807.5 Da

IEP (calculated)

5.118

GRAVY (calculated)

-0.260

Length

372 amino acids

Sequence
(BLAST)

001: MRPPRFLVPT TALLALAVAL SLAAAAADAA RHSYAIVPAP VERADDEVRR MYEAWKSEHG HGHGSDDRLR LEVFRDNLRY IDAHNAEADA GLHTFRLGLT
101: PFADLTLEEY RGRALGFRAR RGGASRVGSG SSYRPRPRGG DLPDAIDWRE LGAVTGVKNQ EQCGGCWAFS AVAAIEGINE IVTGNLVSLS EQEIIDCDTQ
201: DGGCNGGEMQ NAFQFVINNG GIDTEADYPY LGTDAACDAN RVNERVVTID GFVSVATENE TALQEAVANQ PVSVAIDASG RKFQHYTSGI FNGPCGTQLD
301: HGVTAVGYGS ENGKDYWIVK NSWSSSWGEA GYIRIRRNVA AATGKCGIAM DASYPVKSSS NPAGMAVLKM VA

Best Arabidopsis Sequence Match ( AT1G47128.1 )
(BLAST)

001: MGFLKPTMAI LFLAMVAVSS AVDMSIISYD EKHGVSTTGG RSEAEVMSIY EAWLVKHGKA QSQNSLVEKD RRFEIFKDNL RFVDEHNEKN LSYRLGLTRF
101: ADLTNDEYRS KYLGAKMEKK GERRTSLRYE ARVGDELPES IDWRKKGAVA EVKDQGGCGS CWAFSTIGAV EGINQIVTGD LITLSEQELV DCDTSYNEGC
201: NGGLMDYAFE FIIKNGGIDT DKDYPYKGVD GTCDQIRKNA KVVTIDSYED VPTYSEESLK KAVAHQPISI AIEAGGRAFQ LYDSGIFDGS CGTQLDHGVV
301: AVGYGTENGK DYWIVRNSWG KSWGESGYLR MARNIASSSG KCGIAIEPSY PIKNGENPPN PGPSPPSPIK PPTQCDSYYT CPESNTCCCL FEYGKYCFAW
401: GCCPLEAATC CDDNYSCCPH EYPVCDLDQG TCLLSKNSPF SVKALKRKPA TPFWSQGRKN IA

Arabidopsis Description

RD21ARD21A [Source:UniProtKB/TrEMBL;Acc:A0A178WIH7]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.