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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 8
  • vacuole 6
  • plasma membrane 5
  • golgi 5
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d031971_P002 Maize endoplasmic reticulum 84.41 90.75
TraesCS3B01G380400.1 Wheat golgi 80.91 82.69
TraesCS3A01G348500.1 Wheat endoplasmic reticulum 80.38 82.14
TraesCS3A01G346900.1 Wheat endoplasmic reticulum 80.38 82.14
TraesCS3D01G340500.1 Wheat endoplasmic reticulum 79.84 81.59
TraesCS3B01G378600.1 Wheat endoplasmic reticulum 80.11 80.76
HORVU3Hr1G088270.2 Barley extracellular 79.84 80.49
HORVU3Hr1G088080.2 Barley endoplasmic reticulum, extracellular 78.23 77.81
Os08t0556900-01 Rice extracellular 80.11 77.4
TraesCS3D01G342100.2 Wheat endoplasmic reticulum 77.69 73.16
VIT_01s0137g00330.t01 Wine grape endoplasmic reticulum 60.75 62.95
GSMUA_AchrUn_... Banana endoplasmic reticulum 60.22 62.4
AT5G50260.1 Thale cress endoplasmic reticulum 59.68 61.5
CDY39574 Canola cytosol, endoplasmic reticulum, nucleus 48.39 61.22
VIT_17s0000g09770.t01 Wine grape endoplasmic reticulum 58.6 60.56
Solyc03g111730.2.1 Tomato endoplasmic reticulum 58.6 60.56
PGSC0003DMT400039210 Potato endoplasmic reticulum 58.6 60.56
KRH63669 Soybean endoplasmic reticulum 58.87 60.5
KRH54277 Soybean endoplasmic reticulum 58.87 60.5
Bra000615.1-P Field mustard endoplasmic reticulum 58.33 60.11
EES09937 Sorghum endoplasmic reticulum 59.95 60.11
CDX83168 Canola endoplasmic reticulum 58.06 59.83
CDY34045 Canola endoplasmic reticulum 58.06 59.83
PGSC0003DMT400027975 Potato endoplasmic reticulum 56.72 59.1
GSMUA_Achr10P... Banana endoplasmic reticulum 56.45 58.99
KRH03891 Soybean endoplasmic reticulum 59.68 58.58
Solyc05g013920.2.1 Tomato endoplasmic reticulum 56.18 58.38
CDY48168 Canola endoplasmic reticulum 55.11 57.1
Bra018067.1-P Field mustard endoplasmic reticulum 55.11 57.1
EES01927 Sorghum extracellular 56.45 56.91
AT3G48340.1 Thale cress endoplasmic reticulum, extracellular 53.76 55.4
AT3G48350.1 Thale cress endoplasmic reticulum 53.23 54.4
EER90747 Sorghum endoplasmic reticulum 55.65 54.33
Bra018066.1-P Field mustard endoplasmic reticulum 52.96 53.53
CDY39575 Canola endoplasmic reticulum 52.96 53.53
KXG19778 Sorghum cytosol, nucleus, plastid 42.2 50.97
KXG19777 Sorghum extracellular 46.24 50.59
EER89590 Sorghum extracellular 45.97 50.29
EES02142 Sorghum vacuole 51.08 50.26
EES10461 Sorghum endoplasmic reticulum 45.43 50.0
EES10550 Sorghum extracellular 45.7 50.0
KXG19775 Sorghum extracellular 45.7 50.0
EES10463 Sorghum endoplasmic reticulum 45.16 49.7
KXG25862 Sorghum endoplasmic reticulum 44.89 49.55
KXG25861 Sorghum endoplasmic reticulum 44.89 49.55
KXG25863 Sorghum endoplasmic reticulum 44.89 49.55
KXG21060 Sorghum endoplasmic reticulum, golgi, vacuole 49.19 49.33
OQU81188 Sorghum cytosol, nucleus, plastid 36.56 49.28
OQU81187 Sorghum endoplasmic reticulum, extracellular 45.43 48.7
EER93437 Sorghum endoplasmic reticulum 45.16 47.59
EES07368 Sorghum extracellular 44.09 46.07
KXG20680 Sorghum endoplasmic reticulum, extracellular, vacuole 43.82 45.53
EER88857 Sorghum endoplasmic reticulum 43.55 43.55
EER88858 Sorghum golgi, vacuole 43.01 40.3
KXG27269 Sorghum endoplasmic reticulum 50.27 40.3
EES13064 Sorghum extracellular, plasma membrane, vacuole 47.58 37.9
EES11628 Sorghum extracellular 47.04 37.16
EES18460 Sorghum endoplasmic reticulum 43.01 34.63
Protein Annotations
MapMan:19.4.1.1Gene3D:3.90.70.10EntrezGene:8058001UniProt:C5YNA1EnsemblPlants:EES15197ProteinID:EES15197
ProteinID:EES15197.1GO:GO:0003674GO:GO:0003824GO:GO:0004197GO:GO:0005575GO:GO:0005576
GO:GO:0005615GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005764GO:GO:0005773
GO:GO:0006508GO:GO:0008150GO:GO:0008152GO:GO:0008233GO:GO:0008234GO:GO:0009056
GO:GO:0009987GO:GO:0016787GO:GO:0019538GO:GO:0051603PFAM:PF00112PFAM:PF08246
PRINTS:PR00705ScanProsite:PS00139ScanProsite:PS00639ScanProsite:PS00640PANTHER:PTHR12411PANTHER:PTHR12411:SF366
InterPro:Papain_like_cys_pep_sfInterPro:Pept_asp_ASInterPro:Pept_cys_ASInterPro:Pept_his_ASInterPro:Peptidase_C1AInterPro:Peptidase_C1A_C
InterPro:Prot_inhib_I29SMART:SM00645SMART:SM00848EnsemblPlantsGene:SORBI_3007G172100SUPFAM:SSF54001unigene:Sbi.727
SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0001A87DE0RefSeq:XP_002445702.1SEG:seg:
Description
hypothetical protein
Coordinates
chr7:-:60704882..60706480
Molecular Weight (calculated)
40259.2 Da
IEP (calculated)
6.734
GRAVY (calculated)
-0.338
Length
372 amino acids
Sequence
(BLAST)
001: MARAVALAAA VLLAAALALL AAAPAPASAV EFGAEDLASE EALWALYERW RGRHAVARDL GDKARRFNVF KENVRLIHDF NQRDEPYKLR LNRFGDMTAD
101: EFRRHYAGSR VAHHRMFRGD RQGSASSFMY AGARDLPTSV DWRQKGAVTD VKDQGQCGSC WAFSTIAAVE GINAIKTKNL TSLSEQQLVD CDTKGNAGCD
201: GGLMDYAFQY IAKHGGVAAE DAYPYKARQA SCKKSPAPAV TIDGYEDVPA NDESALKKAV AHQPVSVAIE ASGSHFQFYS EGVFAGRCGT ELDHGVTAVG
301: YGVAADGTKY WVVKNSWGPE WGEKGYIRMA RDVAAKEGHC GIAMEASYPV KTSPNPKVRA VVVGDDDSHD EL
Best Arabidopsis Sequence Match ( AT5G50260.1 )
(BLAST)
001: MKRFIVLALC MLMVLETTKG LDFHNKDVES ENSLWELYER WRSHHTVARS LEEKAKRFNV FKHNVKHIHE TNKKDKSYKL KLNKFGDMTS EEFRRTYAGS
101: NIKHHRMFQG EKKATKSFMY ANVNTLPTSV DWRKNGAVTP VKNQGQCGSC WAFSTVVAVE GINQIRTKKL TSLSEQELVD CDTNQNQGCN GGLMDLAFEF
201: IKEKGGLTSE LVYPYKASDE TCDTNKENAP VVSIDGHEDV PKNSEDDLMK AVANQPVSVA IDAGGSDFQF YSEGVFTGRC GTELNHGVAV VGYGTTIDGT
301: KYWIVKNSWG EEWGEKGYIR MQRGIRHKEG LCGIAMEASY PLKNSNTNPS RLSLDSLKDE L
Arabidopsis Description
CEP1KDEL-tailed cysteine endopeptidase CEP1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGR9]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.