Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 6
- extracellular 4
- golgi 4
- plasma membrane 4
- endoplasmic reticulum 7
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH63669 | Soybean | endoplasmic reticulum | 66.57 | 66.02 |
| VIT_01s0137g00330.t01 | Wine grape | endoplasmic reticulum | 66.02 | 66.02 |
| KRH54277 | Soybean | endoplasmic reticulum | 66.3 | 65.75 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 65.18 | 65.73 |
| AT5G50260.1 | Thale cress | endoplasmic reticulum | 65.18 | 64.82 |
| PGSC0003DMT400039210 | Potato | endoplasmic reticulum | 64.62 | 64.44 |
| CDY39574 | Canola | cytosol, endoplasmic reticulum, nucleus | 52.65 | 64.29 |
| Bra000615.1-P | Field mustard | endoplasmic reticulum | 64.62 | 64.27 |
| Solyc05g013920.2.1 | Tomato | endoplasmic reticulum | 64.07 | 64.25 |
| Solyc03g111730.2.1 | Tomato | endoplasmic reticulum | 64.35 | 64.17 |
| CDX83168 | Canola | endoplasmic reticulum | 64.35 | 63.99 |
| VIT_17s0000g09770.t01 | Wine grape | endoplasmic reticulum | 64.07 | 63.89 |
| CDY34045 | Canola | endoplasmic reticulum | 64.07 | 63.71 |
| PGSC0003DMT400027975 | Potato | endoplasmic reticulum | 63.23 | 63.59 |
| TraesCS4A01G238600.1 | Wheat | nucleus | 63.51 | 62.64 |
| TraesCS3D01G340500.1 | Wheat | endoplasmic reticulum | 63.51 | 62.64 |
| TraesCS3A01G348500.1 | Wheat | endoplasmic reticulum | 63.23 | 62.36 |
| TraesCS3B01G380400.1 | Wheat | golgi | 63.23 | 62.36 |
| Os11t0255300-01 | Rice | extracellular | 65.46 | 62.17 |
| TraesCS3A01G346900.1 | Wheat | endoplasmic reticulum | 62.95 | 62.09 |
| TraesCS4D01G074800.1 | Wheat | endoplasmic reticulum | 64.07 | 61.83 |
| HORVU3Hr1G088270.2 | Barley | extracellular | 63.51 | 61.79 |
| KRH03891 | Soybean | endoplasmic reticulum | 65.18 | 61.74 |
| HORVU3Hr1G088080.2 | Barley | endoplasmic reticulum, extracellular | 63.79 | 61.23 |
| EES09937 | Sorghum | endoplasmic reticulum | 63.23 | 61.19 |
| TraesCS3B01G378600.1 | Wheat | endoplasmic reticulum | 62.67 | 60.98 |
| CDY48168 | Canola | endoplasmic reticulum | 60.72 | 60.72 |
| Bra018067.1-P | Field mustard | endoplasmic reticulum | 60.72 | 60.72 |
| EES15197 | Sorghum | endoplasmic reticulum | 62.4 | 60.22 |
| AT3G48340.1 | Thale cress | endoplasmic reticulum, extracellular | 60.45 | 60.11 |
| AT3G48350.1 | Thale cress | endoplasmic reticulum | 59.61 | 58.79 |
| Zm00001d031971_P002 | Maize | endoplasmic reticulum | 56.55 | 58.67 |
| Os08t0556900-01 | Rice | extracellular | 62.4 | 58.18 |
| TraesCS4B01G076200.1 | Wheat | endoplasmic reticulum | 64.35 | 57.75 |
| CDY39575 | Canola | endoplasmic reticulum | 58.77 | 57.34 |
| TraesCS3B01G447400.1 | Wheat | endoplasmic reticulum | 59.61 | 57.22 |
| Bra018066.1-P | Field mustard | endoplasmic reticulum | 58.5 | 57.07 |
| Os01t0907600-01 | Rice | extracellular | 58.77 | 56.87 |
| HORVU3Hr1G091920.2 | Barley | endoplasmic reticulum | 59.05 | 56.84 |
| Zm00001d042446_P001 | Maize | extracellular | 58.22 | 56.79 |
| EES01927 | Sorghum | extracellular | 58.22 | 56.64 |
| TraesCS3A01G413000.1 | Wheat | endoplasmic reticulum | 58.22 | 56.64 |
| HORVU3Hr1G091790.1 | Barley | extracellular | 58.77 | 56.57 |
| TraesCS3D01G407600.1 | Wheat | endoplasmic reticulum | 59.33 | 56.5 |
| HORVU3Hr1G091800.1 | Barley | endoplasmic reticulum | 59.61 | 56.46 |
| TraesCS3B01G447500.1 | Wheat | extracellular, vacuole | 58.22 | 56.33 |
| Zm00001d007464_P001 | Maize | endoplasmic reticulum | 60.17 | 56.25 |
| TraesCS3A01G412900.1 | Wheat | endoplasmic reticulum | 59.05 | 56.23 |
| TraesCS3A01G413200.1 | Wheat | endoplasmic reticulum | 58.22 | 55.73 |
| TraesCS3D01G407700.1 | Wheat | endoplasmic reticulum | 58.22 | 55.73 |
| Zm00001d012120_P001 | Maize | endoplasmic reticulum | 58.77 | 55.67 |
| TraesCS3D01G342100.2 | Wheat | endoplasmic reticulum | 60.72 | 55.19 |
| EER90747 | Sorghum | endoplasmic reticulum | 58.22 | 54.86 |
| GSMUA_Achr2P04950_001 | Banana | endoplasmic reticulum, golgi | 52.37 | 53.87 |
| GSMUA_Achr3P03740_001 | Banana | endoplasmic reticulum | 52.09 | 52.97 |
| GSMUA_Achr8P03350_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 44.85 | 48.35 |
| GSMUA_Achr6P13620_001 | Banana | extracellular, vacuole | 43.73 | 47.29 |
| GSMUA_Achr3P11680_001 | Banana | endoplasmic reticulum, vacuole | 50.7 | 46.55 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 53.2 | 40.72 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, extracellular, golgi | 38.44 | 40.23 |
| GSMUA_Achr3P01000_001 | Banana | endoplasmic reticulum | 52.37 | 40.09 |
| GSMUA_Achr4P06140_001 | Banana | endoplasmic reticulum | 52.09 | 39.87 |
| GSMUA_Achr1P15920_001 | Banana | endoplasmic reticulum | 51.25 | 39.15 |
| GSMUA_Achr4P12910_001 | Banana | endoplasmic reticulum | 50.42 | 38.27 |
| GSMUA_Achr1P09800_001 | Banana | endoplasmic reticulum | 49.58 | 37.63 |
| GSMUA_Achr4P17710_001 | Banana | endoplasmic reticulum, extracellular | 44.29 | 36.14 |
Protein Annotations
| MapMan:19.4.1.1 | Gene3D:3.90.70.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0006508 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0008234 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016787 | GO:GO:0019538 | EnsemblPlantsGene:GSMUA_AchrUn_randomG17080_001 | EnsemblPlants:GSMUA_AchrUn_randomP17080_001 | EnsemblPlants:GSMUA_AchrUn_randomT17080_001 | UniProt:M0U9W7 |
| PFAM:PF00112 | PFAM:PF08246 | PRINTS:PR00705 | ScanProsite:PS00139 | ScanProsite:PS00639 | ScanProsite:PS00640 |
| PANTHER:PTHR12411 | PANTHER:PTHR12411:SF346 | InterPro:Papain_like_cys_pep_sf | InterPro:Pept_asp_AS | InterPro:Pept_cys_AS | InterPro:Pept_his_AS |
| InterPro:Peptidase_C1A | InterPro:Peptidase_C1A_C | InterPro:Prot_inhib_I29 | SMART:SM00645 | SMART:SM00848 | SUPFAM:SSF54001 |
| SignalP:SignalP-noTM | UniParc:UPI0002959B23 | : | : | : | : |
Description
Vignain [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG17080_001]
Coordinates
chrchrUn_random:+:80857150..80858650
Molecular Weight (calculated)
39793.8 Da
IEP (calculated)
5.163
GRAVY (calculated)
-0.396
Length
359 amino acids
Sequence
(BLAST)
(BLAST)
001: MWRRALSLVM AIALALATAD SIPFTDKDLA SEESLWDLYE RWRSHHTVSR DLDEKLRRFN VFKANVAYIH ESNKNDKPYK LGLNKFGDMT REEFRGTFAG
101: SKIDHHRMLR GGRDSSGGFM YEDAGDLPSS VDWRDKRAVT GVKNQGHCGS CWAFSAVAAV EGINQIRTNE LVPLSEQELV NCDKQDHGCR GGLMDYAFEF
201: IKTNGGITTE ADYPYLAKQT KCNVIKKGCH VVVIDGYEDV PVNDEEALMK AVANQPVSVA VEASGPDFQF YSEGVFTGDC GTALDHGVAV VGYGTTHDGT
301: TYWIVKNSWG PEWGERGYIR MERGVSAPEG LCGIAMEASY PVKASLNCSN MELPLKDEL
101: SKIDHHRMLR GGRDSSGGFM YEDAGDLPSS VDWRDKRAVT GVKNQGHCGS CWAFSAVAAV EGINQIRTNE LVPLSEQELV NCDKQDHGCR GGLMDYAFEF
201: IKTNGGITTE ADYPYLAKQT KCNVIKKGCH VVVIDGYEDV PVNDEEALMK AVANQPVSVA VEASGPDFQF YSEGVFTGDC GTALDHGVAV VGYGTTHDGT
301: TYWIVKNSWG PEWGERGYIR MERGVSAPEG LCGIAMEASY PVKASLNCSN MELPLKDEL
001: MKRFIVLALC MLMVLETTKG LDFHNKDVES ENSLWELYER WRSHHTVARS LEEKAKRFNV FKHNVKHIHE TNKKDKSYKL KLNKFGDMTS EEFRRTYAGS
101: NIKHHRMFQG EKKATKSFMY ANVNTLPTSV DWRKNGAVTP VKNQGQCGSC WAFSTVVAVE GINQIRTKKL TSLSEQELVD CDTNQNQGCN GGLMDLAFEF
201: IKEKGGLTSE LVYPYKASDE TCDTNKENAP VVSIDGHEDV PKNSEDDLMK AVANQPVSVA IDAGGSDFQF YSEGVFTGRC GTELNHGVAV VGYGTTIDGT
301: KYWIVKNSWG EEWGEKGYIR MQRGIRHKEG LCGIAMEASY PLKNSNTNPS RLSLDSLKDE L
101: NIKHHRMFQG EKKATKSFMY ANVNTLPTSV DWRKNGAVTP VKNQGQCGSC WAFSTVVAVE GINQIRTKKL TSLSEQELVD CDTNQNQGCN GGLMDLAFEF
201: IKEKGGLTSE LVYPYKASDE TCDTNKENAP VVSIDGHEDV PKNSEDDLMK AVANQPVSVA IDAGGSDFQF YSEGVFTGRC GTELNHGVAV VGYGTTIDGT
301: KYWIVKNSWG EEWGEKGYIR MQRGIRHKEG LCGIAMEASY PLKNSNTNPS RLSLDSLKDE L
Arabidopsis Description
CEP1KDEL-tailed cysteine endopeptidase CEP1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGR9]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.