Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 6
- golgi 5
- plasma membrane 5
- endoplasmic reticulum 7
- vacuole 6
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_18s0122g00790.t01 | Wine grape | nucleus | 70.54 | 74.11 |
| GSMUA_Achr2P04950_001 | Banana | endoplasmic reticulum, golgi | 70.54 | 71.35 |
| KRH60879 | Soybean | endoplasmic reticulum | 69.12 | 69.91 |
| Solyc04g082710.2.1 | Tomato | cytosol | 60.34 | 69.84 |
| KRH60878 | Soybean | endoplasmic reticulum | 68.84 | 69.63 |
| VIT_03s0038g04000.t01 | Wine grape | vacuole | 69.12 | 69.32 |
| KRH51560 | Soybean | endoplasmic reticulum | 68.27 | 68.86 |
| Solyc12g094700.1.1 | Tomato | extracellular | 64.31 | 68.58 |
| KRH51561 | Soybean | endoplasmic reticulum | 67.99 | 68.57 |
| PGSC0003DMT400075600 | Potato | vacuole | 67.14 | 67.91 |
| CDY01351 | Canola | endoplasmic reticulum | 67.14 | 67.52 |
| CDY31861 | Canola | endoplasmic reticulum | 67.14 | 67.14 |
| Bra012252.1-P | Field mustard | endoplasmic reticulum | 66.86 | 67.05 |
| TraesCS1B01G033200.1 | Wheat | endoplasmic reticulum, extracellular, golgi | 66.57 | 66.76 |
| Bra016447.1-P | Field mustard | endoplasmic reticulum, golgi, vacuole | 67.71 | 66.76 |
| TraesCS1A01G027300.1 | Wheat | endoplasmic reticulum | 66.29 | 66.67 |
| TraesCS1D01G026500.1 | Wheat | endoplasmic reticulum | 65.72 | 66.1 |
| CDX75496 | Canola | endoplasmic reticulum | 66.57 | 66.01 |
| TraesCS5D01G152400.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 66.57 | 66.01 |
| AT4G35350.1 | Thale cress | endoplasmic reticulum | 66.29 | 65.92 |
| TraesCS5B01G138300.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 66.29 | 65.73 |
| PGSC0003DMT400025691 | Potato | endoplasmic reticulum, extracellular | 66.29 | 65.73 |
| Bra011608.1-P | Field mustard | endoplasmic reticulum | 66.29 | 65.73 |
| Os05t0108600-01 | Rice | extracellular | 66.57 | 65.64 |
| Os01t0971400-01 | Rice | extracellular | 67.71 | 65.48 |
| AT1G20850.1 | Thale cress | endoplasmic reticulum | 66.01 | 65.45 |
| CDX96617 | Canola | endoplasmic reticulum | 60.62 | 65.44 |
| CDY33651 | Canola | endoplasmic reticulum | 60.34 | 65.34 |
| EES02142 | Sorghum | vacuole | 67.14 | 62.7 |
| Zm00001d011787_P001 | Maize | extracellular | 68.27 | 62.6 |
| KXG21060 | Sorghum | endoplasmic reticulum, golgi, vacuole | 65.72 | 62.53 |
| TraesCS5A01G138700.1 | Wheat | plastid | 66.57 | 62.33 |
| GSMUA_Achr3P11680_001 | Banana | endoplasmic reticulum, vacuole | 68.84 | 62.15 |
| CDX69132 | Canola | plastid | 66.86 | 62.11 |
| Os02t0715000-01 | Rice | endoplasmic reticulum | 64.02 | 61.75 |
| EES07368 | Sorghum | extracellular | 62.04 | 61.52 |
| Zm00001d035689_P001 | Maize | extracellular | 64.59 | 60.48 |
| TraesCS6B01G308300.1 | Wheat | extracellular, vacuole | 60.62 | 59.61 |
| TraesCS6A01G279500.1 | Wheat | endoplasmic reticulum, extracellular | 60.34 | 59.17 |
| Zm00001d017834_P001 | Maize | extracellular | 52.12 | 59.16 |
| HORVU6Hr1G070320.2 | Barley | endoplasmic reticulum, extracellular | 60.06 | 58.24 |
| TraesCS6D01G259900.1 | Wheat | plastid | 59.21 | 55.29 |
| CDY31498 | Canola | cytosol | 45.89 | 54.18 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 52.97 | 52.09 |
| HORVU1Hr1G003940.6 | Barley | endoplasmic reticulum | 54.39 | 52.03 |
| GSMUA_Achr8P03350_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 46.74 | 49.55 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 49.29 | 48.88 |
| GSMUA_Achr6P13620_001 | Banana | extracellular, vacuole | 41.36 | 43.98 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, extracellular, golgi | 41.36 | 42.57 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 52.41 | 39.45 |
| GSMUA_Achr1P15920_001 | Banana | endoplasmic reticulum | 51.27 | 38.51 |
| GSMUA_Achr3P01000_001 | Banana | endoplasmic reticulum | 50.71 | 38.17 |
| GSMUA_Achr1P09800_001 | Banana | endoplasmic reticulum | 50.71 | 37.84 |
| GSMUA_Achr4P06140_001 | Banana | endoplasmic reticulum | 49.58 | 37.31 |
| GSMUA_Achr4P12910_001 | Banana | endoplasmic reticulum | 49.58 | 37.0 |
| GSMUA_Achr4P17710_001 | Banana | endoplasmic reticulum, extracellular | 45.61 | 36.59 |
Protein Annotations
| MapMan:19.4.1.1 | MapMan:27.2.10 | Gene3D:3.90.70.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006508 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008234 | GO:GO:0016787 | GO:GO:0019538 | EnsemblPlantsGene:GSMUA_Achr3G03740_001 |
| EnsemblPlants:GSMUA_Achr3P03740_001 | EnsemblPlants:GSMUA_Achr3T03740_001 | UniProt:M0SBJ2 | PFAM:PF00112 | PFAM:PF08246 | PRINTS:PR00705 |
| ScanProsite:PS00139 | ScanProsite:PS00639 | PANTHER:PTHR12411 | PANTHER:PTHR12411:SF357 | InterPro:Papain_like_cys_pep_sf | InterPro:Pept_cys_AS |
| InterPro:Pept_his_AS | InterPro:Peptidase_C1A | InterPro:Peptidase_C1A_C | InterPro:Prot_inhib_I29 | SMART:SM00645 | SMART:SM00848 |
| SUPFAM:SSF54001 | SignalP:SignalP-noTM | UniParc:UPI0002954C49 | SEG:seg | : | : |
Description
Xylem cysteine proteinase 1 [Source:GMGC_GENE;Acc:GSMUA_Achr3G03740_001]
Coordinates
chr3:-:2434757..2436214
Molecular Weight (calculated)
39749.3 Da
IEP (calculated)
6.857
GRAVY (calculated)
-0.407
Length
353 amino acids
Sequence
(BLAST)
(BLAST)
001: MESIKLSLLL LFFCTVTFFA MAKDFSIVGY SPEDLASEET LMYLFENWMA KHSKSYASFQ EKLRKFGIFK DNLKHIDETN TERKSYWLGL NEFADMSHEE
101: FKHRYLGLNT DLPKIKDVRF KARETFMYEK AANLPRSVDW RKKGAVTPVK NQGGCGSCWA FSTVAAVEGI SQIVTGNLTS LSEQELIDCD TTFNHGCKGG
201: LMDYAFAFII ASGGLRTEED YPYLMEEGTC EEKRGGLELV VTISGYEDVP RNSEESFLKT LAHQPVSVAV EASGRDFQFY RGGIFDGPCG TQLDHGVAAV
301: GYGTSKGQDY IMVKNSWGPS WGEKGYIRMK RNTGKREGQC GIYKMASYPT KKK
101: FKHRYLGLNT DLPKIKDVRF KARETFMYEK AANLPRSVDW RKKGAVTPVK NQGGCGSCWA FSTVAAVEGI SQIVTGNLTS LSEQELIDCD TTFNHGCKGG
201: LMDYAFAFII ASGGLRTEED YPYLMEEGTC EEKRGGLELV VTISGYEDVP RNSEESFLKT LAHQPVSVAV EASGRDFQFY RGGIFDGPCG TQLDHGVAAV
301: GYGTSKGQDY IMVKNSWGPS WGEKGYIRMK RNTGKREGQC GIYKMASYPT KKK
001: MAFSAPSLSK FSLLVAISAS ALLCCAFARD FSIVGYTPEH LTNTDKLLEL FESWMSEHSK AYKSVEEKVH RFEVFRENLM HIDQRNNEIN SYWLGLNEFA
101: DLTHEEFKGR YLGLAKPQFS RKRQPSANFR YRDITDLPKS VDWRKKGAVA PVKDQGQCGS CWAFSTVAAV EGINQITTGN LSSLSEQELI DCDTTFNSGC
201: NGGLMDYAFQ YIISTGGLHK EDDYPYLMEE GICQEQKEDV ERVTISGYED VPENDDESLV KALAHQPVSV AIEASGRDFQ FYKGGVFNGK CGTDLDHGVA
301: AVGYGSSKGS DYVIVKNSWG PRWGEKGFIR MKRNTGKPEG LCGINKMASY PTKTK
101: DLTHEEFKGR YLGLAKPQFS RKRQPSANFR YRDITDLPKS VDWRKKGAVA PVKDQGQCGS CWAFSTVAAV EGINQITTGN LSSLSEQELI DCDTTFNSGC
201: NGGLMDYAFQ YIISTGGLHK EDDYPYLMEE GICQEQKEDV ERVTISGYED VPENDDESLV KALAHQPVSV AIEASGRDFQ FYKGGVFNGK CGTDLDHGVA
301: AVGYGSSKGS DYVIVKNSWG PRWGEKGFIR MKRNTGKPEG LCGINKMASY PTKTK
Arabidopsis Description
XCP1Cysteine protease XCP1 [Source:UniProtKB/Swiss-Prot;Acc:O65493]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.