Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G308300.1 | Wheat | extracellular, vacuole | 93.89 | 94.15 |
| HORVU6Hr1G070320.2 | Barley | endoplasmic reticulum, extracellular | 93.33 | 92.31 |
| TraesCS6D01G259900.1 | Wheat | plastid | 93.06 | 88.62 |
| Os02t0715000-01 | Rice | endoplasmic reticulum | 76.39 | 75.14 |
| EES07368 | Sorghum | extracellular | 72.78 | 73.6 |
| Zm00001d017834_P001 | Maize | extracellular | 61.39 | 71.06 |
| GSMUA_Achr2P04950_001 | Banana | endoplasmic reticulum, golgi | 61.11 | 63.04 |
| GSMUA_Achr3P03740_001 | Banana | endoplasmic reticulum | 59.17 | 60.34 |
| Solyc04g082710.2.1 | Tomato | cytosol | 51.11 | 60.33 |
| AT4G35350.1 | Thale cress | endoplasmic reticulum | 58.89 | 59.72 |
| VIT_03s0038g04000.t01 | Wine grape | vacuole | 58.33 | 59.66 |
| VIT_18s0122g00790.t01 | Wine grape | nucleus | 55.56 | 59.52 |
| Bra011608.1-P | Field mustard | endoplasmic reticulum | 58.06 | 58.71 |
| CDX75496 | Canola | endoplasmic reticulum | 58.06 | 58.71 |
| Solyc12g094700.1.1 | Tomato | extracellular | 53.89 | 58.61 |
| TraesCS1A01G027300.1 | Wheat | endoplasmic reticulum | 56.39 | 57.83 |
| PGSC0003DMT400075600 | Potato | vacuole | 55.83 | 57.59 |
| KRH60879 | Soybean | endoplasmic reticulum | 54.72 | 56.45 |
| PGSC0003DMT400025691 | Potato | endoplasmic reticulum, extracellular | 55.56 | 56.18 |
| KRH60878 | Soybean | endoplasmic reticulum | 54.44 | 56.16 |
| CDY01351 | Canola | endoplasmic reticulum | 54.72 | 56.13 |
| CDY31861 | Canola | endoplasmic reticulum | 54.72 | 55.81 |
| KRH51561 | Soybean | endoplasmic reticulum | 54.17 | 55.71 |
| KRH51560 | Soybean | endoplasmic reticulum | 54.17 | 55.71 |
| Bra012252.1-P | Field mustard | endoplasmic reticulum | 54.17 | 55.4 |
| AT1G20850.1 | Thale cress | endoplasmic reticulum | 54.72 | 55.34 |
| Bra016447.1-P | Field mustard | endoplasmic reticulum, golgi, vacuole | 55.0 | 55.31 |
| CDX69132 | Canola | plastid | 58.33 | 55.26 |
| CDY33651 | Canola | endoplasmic reticulum | 49.17 | 54.29 |
| CDX96617 | Canola | endoplasmic reticulum | 48.89 | 53.82 |
| TraesCS5A01G138700.1 | Wheat | plastid | 55.28 | 52.79 |
| GSMUA_Achr3P11680_001 | Banana | endoplasmic reticulum, vacuole | 56.94 | 52.43 |
| TraesCS2A01G054600.1 | Wheat | cytosol, nucleus, plastid | 13.33 | 50.53 |
| TraesCS2A01G054500.1 | Wheat | cytosol, nucleus, plastid | 13.33 | 50.53 |
| TraesCS2A01G054800.1 | Wheat | cytosol, mitochondrion, nucleus | 20.0 | 48.65 |
| TraesCS6A01G346400.1 | Wheat | cytosol | 12.78 | 48.42 |
| CDY31498 | Canola | cytosol | 39.44 | 47.49 |
| TraesCS4A01G273900.1 | Wheat | cytosol, nucleus, plastid | 12.5 | 47.37 |
| TraesCS2A01G056000.1 | Wheat | endoplasmic reticulum, extracellular | 42.22 | 45.37 |
| TraesCS4A01G274100.1 | Wheat | extracellular | 41.94 | 44.94 |
| TraesCS6A01G154300.1 | Wheat | extracellular | 42.5 | 44.74 |
| TraesCS6A01G345600.1 | Wheat | cytosol, mitochondrion, nucleus | 18.33 | 44.59 |
| TraesCS4A01G274000.1 | Wheat | extracellular | 41.94 | 44.28 |
| TraesCS5A01G391500.1 | Wheat | endoplasmic reticulum, extracellular | 42.5 | 44.22 |
| TraesCS4A01G273800.1 | Wheat | extracellular | 41.67 | 43.99 |
| TraesCS4A01G238600.1 | Wheat | nucleus | 44.17 | 43.68 |
| TraesCS6A01G346800.1 | Wheat | extracellular | 40.83 | 43.36 |
| TraesCS6A01G346500.1 | Wheat | extracellular | 33.61 | 43.06 |
| TraesCS3A01G348500.1 | Wheat | endoplasmic reticulum | 43.33 | 42.86 |
| TraesCS6A01G346600.1 | Wheat | extracellular | 40.28 | 42.77 |
| TraesCS3A01G346900.1 | Wheat | endoplasmic reticulum | 43.06 | 42.58 |
| TraesCS6A01G345900.1 | Wheat | extracellular | 40.0 | 42.48 |
| TraesCS1A01G223500.1 | Wheat | extracellular | 40.0 | 42.48 |
| TraesCS3A01G412900.1 | Wheat | endoplasmic reticulum | 43.89 | 41.91 |
| TraesCS3A01G413000.1 | Wheat | endoplasmic reticulum | 42.22 | 41.19 |
| TraesCS2A01G054700.1 | Wheat | cytosol, mitochondrion, nucleus | 12.22 | 41.12 |
| TraesCS3A01G413200.1 | Wheat | endoplasmic reticulum | 42.5 | 40.8 |
| TraesCS4A01G273700.1 | Wheat | extracellular | 30.83 | 36.63 |
| TraesCS2A01G512100.1 | Wheat | extracellular | 46.39 | 36.23 |
| TraesCS2A01G546700.1 | Wheat | endoplasmic reticulum | 45.83 | 35.26 |
| TraesCS2A01G546300.1 | Wheat | endoplasmic reticulum, vacuole | 45.83 | 35.18 |
| TraesCS2A01G545700.1 | Wheat | unclear | 44.72 | 34.11 |
| TraesCS7A01G264200.1 | Wheat | endoplasmic reticulum | 44.17 | 33.54 |
| TraesCS1A01G325400.1 | Wheat | extracellular | 40.83 | 32.45 |
Protein Annotations
| MapMan:27.2.10 | Gene3D:3.90.70.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006508 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008234 | GO:GO:0016787 | GO:GO:0019538 | PFAM:PF00112 | PFAM:PF08246 |
| PRINTS:PR00705 | ScanProsite:PS00139 | ScanProsite:PS00639 | ScanProsite:PS00640 | PANTHER:PTHR12411 | PANTHER:PTHR12411:SF357 |
| InterPro:Papain_like_cys_pep_sf | InterPro:Pept_asp_AS | InterPro:Pept_cys_AS | InterPro:Pept_his_AS | InterPro:Peptidase_C1A | InterPro:Peptidase_C1A_C |
| InterPro:Prot_inhib_I29 | SMART:SM00645 | SMART:SM00848 | SUPFAM:SSF54001 | SignalP:SignalP-noTM | EnsemblPlantsGene:TraesCS6A01G279500 |
| EnsemblPlants:TraesCS6A01G279500.1 | TIGR:cd02248 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr6A:+:507093983..507095417
Molecular Weight (calculated)
39480.2 Da
IEP (calculated)
6.179
GRAVY (calculated)
-0.329
Length
360 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSELSTVFF LLIVFAACCC SSSSATHHDP SVVGYSQEDV ALPSRILDLF SSWSVKHSRV YVTPKEKVRR YEVFRQNLKH IVETNRRNGS YWLGLNQFAD
101: VAHEEFKAGY LGLSAGGRPR APTTAFRYEA AVDLTREVDW RKKGAVTPVK NQGKCGSCWA FSTVAAVEGI NQIVTGKLES LSEQELMDCD STFDHGCGGG
201: LMDFAYAYIV GNQGIHTDAD YPYLMEEGDC KENQPHSKVV TISGYEDVPE NSELSLLKAL AHQPVSVGIA AGSRDFQFYK GGVFEGTCGT QLDHALTAVG
301: YGSSNGQDYI IMKNSWGGGW GEQGYFRIKR GTGRPEGVCD IYRIASYPTK NNGTGWGWGA
101: VAHEEFKAGY LGLSAGGRPR APTTAFRYEA AVDLTREVDW RKKGAVTPVK NQGKCGSCWA FSTVAAVEGI NQIVTGKLES LSEQELMDCD STFDHGCGGG
201: LMDFAYAYIV GNQGIHTDAD YPYLMEEGDC KENQPHSKVV TISGYEDVPE NSELSLLKAL AHQPVSVGIA AGSRDFQFYK GGVFEGTCGT QLDHALTAVG
301: YGSSNGQDYI IMKNSWGGGW GEQGYFRIKR GTGRPEGVCD IYRIASYPTK NNGTGWGWGA
001: MALSSPSRIL CFALALSAAS LSLSFASSHD YSIVGYSPED LESHDKLIEL FENWISNFEK AYETVEEKFL RFEVFKDNLK HIDETNKKGK SYWLGLNEFA
101: DLSHEEFKKM YLGLKTDIVR RDEERSYAEF AYRDVEAVPK SVDWRKKGAV AEVKNQGSCG SCWAFSTVAA VEGINKIVTG NLTTLSEQEL IDCDTTYNNG
201: CNGGLMDYAF EYIVKNGGLR KEEDYPYSME EGTCEMQKDE SETVTINGHQ DVPTNDEKSL LKALAHQPLS VAIDASGREF QFYSGGVFDG RCGVDLDHGV
301: AAVGYGSSKG SDYIIVKNSW GPKWGEKGYI RLKRNTGKPE GLCGINKMAS FPTKTK
101: DLSHEEFKKM YLGLKTDIVR RDEERSYAEF AYRDVEAVPK SVDWRKKGAV AEVKNQGSCG SCWAFSTVAA VEGINKIVTG NLTTLSEQEL IDCDTTYNNG
201: CNGGLMDYAF EYIVKNGGLR KEEDYPYSME EGTCEMQKDE SETVTINGHQ DVPTNDEKSL LKALAHQPLS VAIDASGREF QFYSGGVFDG RCGVDLDHGV
301: AAVGYGSSKG SDYIIVKNSW GPKWGEKGYI RLKRNTGKPE GLCGINKMAS FPTKTK
Arabidopsis Description
XCP2Cysteine protease XCP2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LM66]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.