Factsheet for TraesCS1A01G325400.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
golgi 4
plasma membrane 4
endoplasmic reticulum 5
vacuole 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G327000.1	Wheat	extracellular	95.36	95.15
TraesCS1B01G338500.1	Wheat	endoplasmic reticulum, unclear	96.47	94.59
HORVU1Hr1G075530.3	Barley	plastid	90.07	80.47
Zm00001d038650_P001	Maize	extracellular	81.46	80.22
Os05t0508300-01	Rice	plasma membrane	79.25	79.78
EES18460	Sorghum	endoplasmic reticulum	80.79	79.22
GSMUA_Achr4P17710_001	Banana	endoplasmic reticulum, extracellular	64.24	66.14
PGSC0003DMT400009624	Potato	extracellular	57.62	59.45
VIT_18s0001g13270.t01	Wine grape	extracellular	56.95	59.17
Bra019982.1-P	Field mustard	extracellular, golgi	57.62	58.92
CDX94938	Canola	extracellular, vacuole	56.95	58.37
AT1G09850.1	Thale cress	endoplasmic reticulum	56.29	58.35
CDX93470	Canola	plasma membrane	56.95	58.24
KRH61098	Soybean	endoplasmic reticulum, extracellular, plasma membrane	56.07	57.86
TraesCS1A01G027300.1	Wheat	endoplasmic reticulum	35.54	45.87
TraesCS2A01G054800.1	Wheat	cytosol, mitochondrion, nucleus	14.79	45.27
TraesCS2A01G054600.1	Wheat	cytosol, nucleus, plastid	9.49	45.26
TraesCS4A01G273900.1	Wheat	cytosol, nucleus, plastid	9.49	45.26
TraesCS2A01G054500.1	Wheat	cytosol, nucleus, plastid	9.49	45.26
TraesCS2A01G512100.1	Wheat	extracellular	44.37	43.6
TraesCS6A01G346400.1	Wheat	cytosol	9.05	43.16
TraesCS3A01G346900.1	Wheat	endoplasmic reticulum	34.44	42.86
TraesCS4A01G238600.1	Wheat	nucleus	34.44	42.86
TraesCS3A01G348500.1	Wheat	endoplasmic reticulum	34.22	42.58
TraesCS2A01G545700.1	Wheat	unclear	44.15	42.37
TraesCS3A01G413000.1	Wheat	endoplasmic reticulum	34.22	42.01
TraesCS4A01G274100.1	Wheat	extracellular	30.91	41.67
TraesCS5A01G138700.1	Wheat	plastid	34.66	41.64
TraesCS4A01G274000.1	Wheat	extracellular	31.35	41.64
TraesCS4A01G273800.1	Wheat	extracellular	31.13	41.35
TraesCS5A01G391500.1	Wheat	endoplasmic reticulum, extracellular	31.57	41.33
TraesCS6A01G345600.1	Wheat	cytosol, mitochondrion, nucleus	13.47	41.22
TraesCS3A01G413200.1	Wheat	endoplasmic reticulum	34.0	41.07
TraesCS2A01G546700.1	Wheat	endoplasmic reticulum	42.38	41.03
TraesCS1A01G223500.1	Wheat	extracellular	30.68	41.0
TraesCS6A01G279500.1	Wheat	endoplasmic reticulum, extracellular	32.45	40.83
TraesCS3A01G412900.1	Wheat	endoplasmic reticulum	33.77	40.58
TraesCS7A01G264200.1	Wheat	endoplasmic reticulum	42.38	40.51
TraesCS6A01G346800.1	Wheat	extracellular	30.24	40.41
TraesCS2A01G546300.1	Wheat	endoplasmic reticulum, vacuole	41.72	40.3
TraesCS6A01G154300.1	Wheat	extracellular	30.24	40.06
TraesCS6A01G346600.1	Wheat	extracellular	29.8	39.82
TraesCS6A01G345900.1	Wheat	extracellular	29.58	39.53
TraesCS6A01G346500.1	Wheat	extracellular	24.28	39.15
TraesCS2A01G056000.1	Wheat	endoplasmic reticulum, extracellular	28.92	39.1
TraesCS4A01G273700.1	Wheat	extracellular	24.5	36.63
TraesCS2A01G054700.1	Wheat	cytosol, mitochondrion, nucleus	8.17	34.58
Solyc04g080880.2.1	Tomato	extracellular	57.62	30.89

Protein Annotations

Gene3D:3.10.20.500	Gene3D:3.90.70.10	MapMan:50.3.4	GO:GO:0003674	GO:GO:0003824	GO:GO:0006508
GO:GO:0008150	GO:GO:0008152	GO:GO:0008234	GO:GO:0016787	GO:GO:0019538	InterPro:Granulin
InterPro:Granulin_sf	InterPro:IPR037277	PFAM:PF00112	PFAM:PF00396	PFAM:PF08246	PRINTS:PR00705
ScanProsite:PS00139	ScanProsite:PS00639	ScanProsite:PS00640	PANTHER:PTHR12411	PANTHER:PTHR12411:SF387	InterPro:Papain_like_cys_pep_sf
InterPro:Pept_asp_AS	InterPro:Pept_cys_AS	InterPro:Pept_his_AS	InterPro:Peptidase_C1A	InterPro:Peptidase_C1A_C	InterPro:Prot_inhib_I29
SMART:SM00277	SMART:SM00645	SMART:SM00848	SUPFAM:SSF54001	SUPFAM:SSF57277	SignalP:SignalP-noTM
EnsemblPlantsGene:TraesCS1A01G325400	EnsemblPlants:TraesCS1A01G325400.1	TIGR:cd02248	SEG:seg	:	:

Description

No Description!

Coordinates

chr1A:+:516369809..516372965

Molecular Weight (calculated)

47928.7 Da

IEP (calculated)

6.730

GRAVY (calculated)

-0.185

Length

453 amino acids

Sequence
(BLAST)

001: MGLVHCLPPL LLLLLLSASV GGEKGLSASA YEAQFEAWCA EHGKAYATPG ERAARLAAFA DNAAFVAAHN AGAAANGAGS PSYTLALNAF ADLTHDEFRA
101: ARLGRLAAGP APLGEPRSSD GGFEGRVGAV PDALDWRQSG AVTKVKDQGS CGACWSFSAT GAMEGINKIK TGSLLSLSEQ ELIDCDRSYN AGCGGGLMTY
201: AYKFVIKNGG IDTEDDYPFR EADGTCNKNK LKKHVVTIDG YKEVPPSKED LLLQAVAQQP ISVGICGSAR AFQLYSQGIF DGPCPTSLDH AVLIVGYGSE
301: GGKDYWIVKN SWGERWGMKG YMHMHRNTGS SSGICGINMM ASFPTKTSPN PPPSPGPGPT KCSVFTSCPE GSTCCCSWRA LGFCLSWSCC ELDNAVCCSD
401: NRSCCPHDYP ICDTARGRCL KGNGNFSSIE GIKRKQAFSK VPSWNGLLEL LDQ

Best Arabidopsis Sequence Match ( AT1G09850.1 )
(BLAST)

001: MSMSSSSFIS LTFFFLLLVS SSSSSDDISE LFDDWCQKHG KTYGSEEERQ QRIQIFKDNH DFVTQHNLIT NATYSLSLNA FADLTHHEFK ASRLGLSVSA
101: PSVIMASKGQ SLGGSVKVPD SVDWRKKGAV TNVKDQGSCG ACWSFSATGA MEGINQIVTG DLISLSEQEL IDCDKSYNAG CNGGLMDYAF EFVIKNHGID
201: TEKDYPYQER DGTCKKDKLK QKVVTIDSYA GVKSNDEKAL MEAVAAQPVS VGICGSERAF QLYSSGIFSG PCSTSLDHAV LIVGYGSQNG VDYWIVKNSW
301: GKSWGMDGFM HMQRNTENSD GVCGINMLAS YPIKTHPNPP PPSPPGPTKC NLFTYCSSGE TCCCARELFG LCFSWKCCEI ESAVCCKDGR HCCPHDYPVC
401: DTTRSLCLKK TGNFTAIKPF WKKNSSKQLG RFEEWVM

Arabidopsis Description

XBCP3At1g09850 [Source:UniProtKB/TrEMBL;Acc:Q0WVJ5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.