Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 7
- golgi 5
- extracellular 5
- vacuole 4
- plasma membrane 4
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra019982.1-P | Field mustard | extracellular, golgi | 90.16 | 88.94 |
| CDX93470 | Canola | plasma membrane | 89.93 | 88.71 |
| CDX94938 | Canola | extracellular, vacuole | 89.7 | 88.69 |
| PGSC0003DMT400009624 | Potato | extracellular | 60.87 | 60.59 |
| KRH61098 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 60.87 | 60.59 |
| GSMUA_Achr4P17710_001 | Banana | endoplasmic reticulum, extracellular | 59.95 | 59.55 |
| Zm00001d038650_P001 | Maize | extracellular | 60.64 | 57.61 |
| VIT_18s0001g13270.t01 | Wine grape | extracellular | 57.44 | 57.57 |
| TraesCS1D01G327000.1 | Wheat | extracellular | 59.27 | 57.05 |
| EES18460 | Sorghum | endoplasmic reticulum | 59.95 | 56.71 |
| Os05t0508300-01 | Rice | plasma membrane | 58.35 | 56.67 |
| TraesCS1A01G325400.1 | Wheat | extracellular | 58.35 | 56.29 |
| TraesCS1B01G338500.1 | Wheat | endoplasmic reticulum, unclear | 58.58 | 55.41 |
| HORVU1Hr1G075530.3 | Barley | plastid | 57.44 | 49.51 |
| AT1G47128.1 | Thale cress | endoplasmic reticulum | 49.66 | 46.97 |
| AT4G23520.1 | Thale cress | endoplasmic reticulum | 38.22 | 46.91 |
| AT5G43060.1 | Thale cress | endoplasmic reticulum | 49.43 | 46.65 |
| AT1G20850.1 | Thale cress | endoplasmic reticulum | 37.99 | 46.63 |
| AT3G19390.1 | Thale cress | endoplasmic reticulum | 47.83 | 46.24 |
| AT4G35350.1 | Thale cress | endoplasmic reticulum | 37.3 | 45.92 |
| AT4G36880.1 | Thale cress | vacuole | 39.36 | 45.74 |
| AT3G19400.1 | Thale cress | endoplasmic reticulum, vacuole | 37.53 | 45.3 |
| AT3G48340.1 | Thale cress | endoplasmic reticulum, extracellular | 36.38 | 44.04 |
| AT4G11310.1 | Thale cress | endoplasmic reticulum | 35.93 | 43.13 |
| AT5G45890.1 | Thale cress | endoplasmic reticulum, golgi | 33.87 | 42.77 |
| AT4G11320.1 | Thale cress | endoplasmic reticulum | 35.93 | 42.32 |
| AT5G50260.1 | Thale cress | endoplasmic reticulum | 34.32 | 41.55 |
| AT3G48350.1 | Thale cress | endoplasmic reticulum | 34.32 | 41.21 |
| Solyc04g080880.2.1 | Tomato | extracellular | 60.87 | 31.48 |
Protein Annotations
| Gene3D:3.10.20.500 | Gene3D:3.90.70.10 | MapMan:50.3.4 | EntrezGene:837517 | ProteinID:AEE28507.1 | EMBL:AK226753 |
| ArrayExpress:AT1G09850 | EnsemblPlantsGene:AT1G09850 | RefSeq:AT1G09850 | TAIR:AT1G09850 | RefSeq:AT1G09850-TAIR-G | EnsemblPlants:AT1G09850.1 |
| TAIR:AT1G09850.1 | Unigene:At.10233 | EMBL:BT026490 | MEROPS:C01.A13 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004197 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005615 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005764 | GO:GO:0005773 | GO:GO:0005783 | GO:GO:0006508 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008233 | GO:GO:0008234 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016787 |
| GO:GO:0019538 | GO:GO:0051603 | InterPro:Granulin | InterPro:Granulin_sf | InterPro:IPR037277 | RefSeq:NP_563855.1 |
| PFAM:PF00112 | PFAM:PF00396 | PFAM:PF08246 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | PRINTS:PR00705 | ScanProsite:PS00139 | ScanProsite:PS00639 | ScanProsite:PS00640 | PANTHER:PTHR12411 |
| PANTHER:PTHR12411:SF387 | InterPro:Papain_like_cys_pep_sf | InterPro:Pept_asp_AS | InterPro:Pept_cys_AS | InterPro:Pept_his_AS | InterPro:Peptidase_C1A |
| InterPro:Peptidase_C1A_C | InterPro:Prot_inhib_I29 | UniProt:Q0WVJ5 | SMART:SM00277 | SMART:SM00645 | SMART:SM00848 |
| SUPFAM:SSF54001 | SUPFAM:SSF57277 | SignalP:SignalP-noTM | UniParc:UPI0000162CF4 | Symbol:XBCP3 | SEG:seg |
Description
XBCP3At1g09850 [Source:UniProtKB/TrEMBL;Acc:Q0WVJ5]
Coordinates
chr1:+:3201685..3204150
Molecular Weight (calculated)
48075.7 Da
IEP (calculated)
6.418
GRAVY (calculated)
-0.309
Length
437 amino acids
Sequence
(BLAST)
(BLAST)
001: MSMSSSSFIS LTFFFLLLVS SSSSSDDISE LFDDWCQKHG KTYGSEEERQ QRIQIFKDNH DFVTQHNLIT NATYSLSLNA FADLTHHEFK ASRLGLSVSA
101: PSVIMASKGQ SLGGSVKVPD SVDWRKKGAV TNVKDQGSCG ACWSFSATGA MEGINQIVTG DLISLSEQEL IDCDKSYNAG CNGGLMDYAF EFVIKNHGID
201: TEKDYPYQER DGTCKKDKLK QKVVTIDSYA GVKSNDEKAL MEAVAAQPVS VGICGSERAF QLYSSGIFSG PCSTSLDHAV LIVGYGSQNG VDYWIVKNSW
301: GKSWGMDGFM HMQRNTENSD GVCGINMLAS YPIKTHPNPP PPSPPGPTKC NLFTYCSSGE TCCCARELFG LCFSWKCCEI ESAVCCKDGR HCCPHDYPVC
401: DTTRSLCLKK TGNFTAIKPF WKKNSSKQLG RFEEWVM
101: PSVIMASKGQ SLGGSVKVPD SVDWRKKGAV TNVKDQGSCG ACWSFSATGA MEGINQIVTG DLISLSEQEL IDCDKSYNAG CNGGLMDYAF EFVIKNHGID
201: TEKDYPYQER DGTCKKDKLK QKVVTIDSYA GVKSNDEKAL MEAVAAQPVS VGICGSERAF QLYSSGIFSG PCSTSLDHAV LIVGYGSQNG VDYWIVKNSW
301: GKSWGMDGFM HMQRNTENSD GVCGINMLAS YPIKTHPNPP PPSPPGPTKC NLFTYCSSGE TCCCARELFG LCFSWKCCEI ESAVCCKDGR HCCPHDYPVC
401: DTTRSLCLKK TGNFTAIKPF WKKNSSKQLG RFEEWVM
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.