Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- golgi 4
- plasma membrane 4
- endoplasmic reticulum 5
- vacuole 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G325400.1 | Wheat | extracellular | 95.15 | 95.36 |
| TraesCS1B01G338500.1 | Wheat | endoplasmic reticulum, unclear | 95.81 | 94.16 |
| Zm00001d038650_P001 | Maize | extracellular | 81.5 | 80.43 |
| HORVU1Hr1G075530.3 | Barley | plastid | 89.65 | 80.28 |
| Os05t0508300-01 | Rice | plasma membrane | 78.85 | 79.56 |
| EES18460 | Sorghum | endoplasmic reticulum | 80.18 | 78.79 |
| GSMUA_Achr4P17710_001 | Banana | endoplasmic reticulum, extracellular | 64.1 | 66.14 |
| PGSC0003DMT400009624 | Potato | extracellular | 57.93 | 59.91 |
| VIT_18s0001g13270.t01 | Wine grape | extracellular | 57.27 | 59.63 |
| Bra019982.1-P | Field mustard | extracellular, golgi | 58.15 | 59.59 |
| AT1G09850.1 | Thale cress | endoplasmic reticulum | 57.05 | 59.27 |
| CDX94938 | Canola | extracellular, vacuole | 57.49 | 59.05 |
| CDX93470 | Canola | plasma membrane | 57.49 | 58.92 |
| KRH61098 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 56.17 | 58.09 |
| TraesCS1D01G026500.1 | Wheat | endoplasmic reticulum | 35.9 | 46.44 |
| TraesCS2D01G547600.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 37.0 | 45.65 |
| TraesCS5D01G152400.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 35.02 | 44.66 |
| TraesCS2D01G513600.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 45.15 | 44.28 |
| TraesCS6D01G144100.1 | Wheat | cytosol | 29.3 | 44.04 |
| TraesCS2D01G546600.1 | Wheat | plasma membrane, vacuole | 44.93 | 42.95 |
| TraesCS3D01G340500.1 | Wheat | endoplasmic reticulum | 34.36 | 42.86 |
| TraesCS7D01G265100.1 | Wheat | cytosol, nucleus, plastid | 24.23 | 42.64 |
| TraesCS4D01G074800.1 | Wheat | endoplasmic reticulum | 34.8 | 42.47 |
| TraesCS5D01G401300.1 | Wheat | extracellular | 32.16 | 42.32 |
| TraesCS4D01G037200.1 | Wheat | extracellular | 31.5 | 41.94 |
| TraesCS1D01G225100.1 | Wheat | extracellular | 31.28 | 41.89 |
| TraesCS5D01G149800.1 | Wheat | endoplasmic reticulum | 42.95 | 41.67 |
| TraesCS4D01G036900.1 | Wheat | extracellular | 31.28 | 41.64 |
| TraesCS4D01G037100.1 | Wheat | extracellular | 31.28 | 41.64 |
| TraesCS4D01G037500.1 | Wheat | extracellular | 31.28 | 41.64 |
| TraesCS2D01G547800.1 | Wheat | endoplasmic reticulum, extracellular | 42.73 | 41.45 |
| TraesCS5D01G076500.1 | Wheat | endoplasmic reticulum, extracellular | 30.62 | 41.37 |
| TraesCS4D01G037000.1 | Wheat | extracellular | 31.06 | 41.35 |
| TraesCS6D01G144000.1 | Wheat | endoplasmic reticulum, extracellular | 31.06 | 41.23 |
| TraesCS7D01G220000.1 | Wheat | extracellular | 30.84 | 41.18 |
| TraesCS3D01G407700.1 | Wheat | endoplasmic reticulum | 33.92 | 41.07 |
| TraesCS4D01G037300.1 | Wheat | extracellular | 30.84 | 41.06 |
| TraesCS6D01G329900.1 | Wheat | extracellular | 30.62 | 41.0 |
| TraesCS6D01G328000.1 | Wheat | extracellular | 30.4 | 40.71 |
| TraesCS6D01G329600.1 | Wheat | extracellular | 30.4 | 40.71 |
| TraesCS6D01G329500.1 | Wheat | extracellular | 30.4 | 40.71 |
| TraesCS7D01G471400.1 | Wheat | extracellular | 30.4 | 40.59 |
| TraesCS4D01G036700.1 | Wheat | extracellular | 30.4 | 40.47 |
| TraesCS6D01G328600.1 | Wheat | extracellular | 30.18 | 40.41 |
| TraesCS3D01G407600.1 | Wheat | endoplasmic reticulum | 33.48 | 40.32 |
| TraesCS4D01G036600.1 | Wheat | extracellular | 23.57 | 40.23 |
| TraesCS6D01G328500.1 | Wheat | extracellular | 29.96 | 40.12 |
| TraesCS6D01G329400.1 | Wheat | extracellular | 28.85 | 40.06 |
| TraesCS4D01G037400.1 | Wheat | extracellular | 28.85 | 39.94 |
| TraesCS6D01G328300.1 | Wheat | extracellular | 29.74 | 39.82 |
| TraesCS6D01G328100.1 | Wheat | extracellular | 29.74 | 39.82 |
| TraesCS3D01G342100.2 | Wheat | endoplasmic reticulum | 34.14 | 39.24 |
| TraesCS6D01G259900.1 | Wheat | plastid | 31.28 | 37.57 |
| TraesCS4D01G036800.1 | Wheat | extracellular | 10.79 | 33.11 |
| TraesCS6D01G329300.1 | Wheat | extracellular | 22.03 | 31.45 |
| Solyc04g080880.2.1 | Tomato | extracellular | 57.93 | 31.12 |
| TraesCS2D01G053700.1 | Wheat | extracellular | 6.39 | 23.77 |
Protein Annotations
| Gene3D:3.10.20.500 | Gene3D:3.90.70.10 | MapMan:50.3.4 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006508 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008234 | GO:GO:0016787 | GO:GO:0019538 | InterPro:Granulin |
| InterPro:Granulin_sf | InterPro:IPR037277 | PFAM:PF00112 | PFAM:PF00396 | PFAM:PF08246 | PRINTS:PR00705 |
| ScanProsite:PS00139 | ScanProsite:PS00639 | ScanProsite:PS00640 | PANTHER:PTHR12411 | PANTHER:PTHR12411:SF387 | InterPro:Papain_like_cys_pep_sf |
| InterPro:Pept_asp_AS | InterPro:Pept_cys_AS | InterPro:Pept_his_AS | InterPro:Peptidase_C1A | InterPro:Peptidase_C1A_C | InterPro:Prot_inhib_I29 |
| SMART:SM00277 | SMART:SM00645 | SMART:SM00848 | SUPFAM:SSF54001 | SUPFAM:SSF57277 | SignalP:SignalP-noTM |
| EnsemblPlantsGene:TraesCS1D01G327000 | EnsemblPlants:TraesCS1D01G327000.1 | TIGR:cd02248 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr1D:+:419462750..419465731
Molecular Weight (calculated)
47744.3 Da
IEP (calculated)
6.040
GRAVY (calculated)
-0.138
Length
454 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLVHCLPLL LLLLSAAAAA AGGGESVSAS DYEAQFEAWC AEHGKAYATP GERAARLAAF ADNAAFVAAH NAGAAANGPG SPSYTLALNA FADLTHDEFR
101: AARLGRLAVG PGPLGAALPS DGGFEGGVVA VPDALDWRQS GAVTKVKDQG SCGACWSFSA TGAMEGINKI TTGSLLSLSE QELIDCDRSY NAGCGGGLMT
201: YAYKFVIKNG GIDTEDDYPF READGTCNKN KLKKHVVTID GYKEVPPSKE DLLLQAVAQQ PISVGICGSA RAFQLYSQGI FDGPCPTSLD HAVLIVGYGS
301: ENGKDYWIVK NSWGERWGMK GYMHMHRNTG SSSGICGINM MASFPTKTSP NPPPSPGPGP TKCSAFTSCP EGSTCCCSWR ALGFCLSWSC CELDNAVCCS
401: DNRSCCPHDY PICDTARGRC LKGNGNFSSI EGIKRKQAFS KVPSWNGLLE LLDQ
101: AARLGRLAVG PGPLGAALPS DGGFEGGVVA VPDALDWRQS GAVTKVKDQG SCGACWSFSA TGAMEGINKI TTGSLLSLSE QELIDCDRSY NAGCGGGLMT
201: YAYKFVIKNG GIDTEDDYPF READGTCNKN KLKKHVVTID GYKEVPPSKE DLLLQAVAQQ PISVGICGSA RAFQLYSQGI FDGPCPTSLD HAVLIVGYGS
301: ENGKDYWIVK NSWGERWGMK GYMHMHRNTG SSSGICGINM MASFPTKTSP NPPPSPGPGP TKCSAFTSCP EGSTCCCSWR ALGFCLSWSC CELDNAVCCS
401: DNRSCCPHDY PICDTARGRC LKGNGNFSSI EGIKRKQAFS KVPSWNGLLE LLDQ
001: MSMSSSSFIS LTFFFLLLVS SSSSSDDISE LFDDWCQKHG KTYGSEEERQ QRIQIFKDNH DFVTQHNLIT NATYSLSLNA FADLTHHEFK ASRLGLSVSA
101: PSVIMASKGQ SLGGSVKVPD SVDWRKKGAV TNVKDQGSCG ACWSFSATGA MEGINQIVTG DLISLSEQEL IDCDKSYNAG CNGGLMDYAF EFVIKNHGID
201: TEKDYPYQER DGTCKKDKLK QKVVTIDSYA GVKSNDEKAL MEAVAAQPVS VGICGSERAF QLYSSGIFSG PCSTSLDHAV LIVGYGSQNG VDYWIVKNSW
301: GKSWGMDGFM HMQRNTENSD GVCGINMLAS YPIKTHPNPP PPSPPGPTKC NLFTYCSSGE TCCCARELFG LCFSWKCCEI ESAVCCKDGR HCCPHDYPVC
401: DTTRSLCLKK TGNFTAIKPF WKKNSSKQLG RFEEWVM
101: PSVIMASKGQ SLGGSVKVPD SVDWRKKGAV TNVKDQGSCG ACWSFSATGA MEGINQIVTG DLISLSEQEL IDCDKSYNAG CNGGLMDYAF EFVIKNHGID
201: TEKDYPYQER DGTCKKDKLK QKVVTIDSYA GVKSNDEKAL MEAVAAQPVS VGICGSERAF QLYSSGIFSG PCSTSLDHAV LIVGYGSQNG VDYWIVKNSW
301: GKSWGMDGFM HMQRNTENSD GVCGINMLAS YPIKTHPNPP PPSPPGPTKC NLFTYCSSGE TCCCARELFG LCFSWKCCEI ESAVCCKDGR HCCPHDYPVC
401: DTTRSLCLKK TGNFTAIKPF WKKNSSKQLG RFEEWVM
Arabidopsis Description
XBCP3At1g09850 [Source:UniProtKB/TrEMBL;Acc:Q0WVJ5]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.