Factsheet for TraesCS3D01G342100.2

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G380400.1	Wheat	golgi	88.1	95.6
TraesCS3A01G348500.1	Wheat	endoplasmic reticulum	87.34	94.78
TraesCS3D01G340500.1	Wheat	endoplasmic reticulum	85.57	92.86
HORVU3Hr1G088270.2	Barley	extracellular	86.33	92.41
HORVU3Hr1G088080.2	Barley	endoplasmic reticulum, extracellular	86.08	90.91
EES15197	Sorghum	endoplasmic reticulum	73.16	77.69
Zm00001d031971_P002	Maize	endoplasmic reticulum	66.84	76.3
Os08t0556900-01	Rice	extracellular	70.63	72.47
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	55.19	60.72
TraesCS4D01G074800.1	Wheat	endoplasmic reticulum	56.2	59.68
AT5G50260.1	Thale cress	endoplasmic reticulum	54.43	59.56
VIT_01s0137g00330.t01	Wine grape	endoplasmic reticulum	53.92	59.33
PGSC0003DMT400039210	Potato	endoplasmic reticulum	53.92	59.17
Solyc03g111730.2.1	Tomato	endoplasmic reticulum	53.67	58.89
VIT_17s0000g09770.t01	Wine grape	endoplasmic reticulum	53.42	58.61
KRH63669	Soybean	endoplasmic reticulum	53.42	58.29
KRH54277	Soybean	endoplasmic reticulum	53.42	58.29
CDY34045	Canola	endoplasmic reticulum	53.16	58.17
Bra000615.1-P	Field mustard	endoplasmic reticulum	53.16	58.17
CDY39574	Canola	cytosol, endoplasmic reticulum, nucleus	43.29	58.16
CDX83168	Canola	endoplasmic reticulum	52.91	57.89
PGSC0003DMT400027975	Potato	endoplasmic reticulum	51.65	57.14
Solyc05g013920.2.1	Tomato	endoplasmic reticulum	51.39	56.7
GSMUA_Achr10P...	Banana	endoplasmic reticulum	50.38	55.9
KRH03891	Soybean	endoplasmic reticulum	53.16	55.41
TraesCS3D01G407600.1	Wheat	endoplasmic reticulum	52.15	54.64
Bra018067.1-P	Field mustard	endoplasmic reticulum	49.62	54.6
CDY48168	Canola	endoplasmic reticulum	49.62	54.6
AT3G48340.1	Thale cress	endoplasmic reticulum, extracellular	48.61	53.19
TraesCS3D01G407700.1	Wheat	endoplasmic reticulum	50.38	53.07
AT3G48350.1	Thale cress	endoplasmic reticulum	48.61	52.75
Bra018066.1-P	Field mustard	endoplasmic reticulum	48.61	52.17
CDY39575	Canola	endoplasmic reticulum	48.61	52.17
TraesCS1D01G026500.1	Wheat	endoplasmic reticulum	46.33	52.14
TraesCS5D01G152400.1	Wheat	endoplasmic reticulum, golgi, vacuole	46.33	51.4
TraesCS6D01G144100.1	Wheat	cytosol	38.23	50.0
TraesCS6D01G144000.1	Wheat	endoplasmic reticulum, extracellular	41.77	48.25
TraesCS5D01G076500.1	Wheat	endoplasmic reticulum, extracellular	40.51	47.62
TraesCS5D01G401300.1	Wheat	extracellular	41.52	47.54
TraesCS6D01G329500.1	Wheat	extracellular	40.25	46.9
TraesCS6D01G329600.1	Wheat	extracellular	40.0	46.61
TraesCS1D01G225100.1	Wheat	extracellular	40.0	46.61
TraesCS6D01G328500.1	Wheat	extracellular	39.75	46.31
TraesCS6D01G328000.1	Wheat	extracellular	39.75	46.31
TraesCS4D01G037400.1	Wheat	extracellular	38.23	46.04
TraesCS6D01G328300.1	Wheat	extracellular	39.49	46.02
TraesCS7D01G471400.1	Wheat	extracellular	39.49	45.88
TraesCS4D01G037200.1	Wheat	extracellular	39.49	45.75
TraesCS4D01G037300.1	Wheat	extracellular	39.49	45.75
TraesCS6D01G328100.1	Wheat	extracellular	39.24	45.72
TraesCS6D01G329900.1	Wheat	extracellular	39.24	45.72
TraesCS7D01G220000.1	Wheat	extracellular	39.24	45.59
TraesCS6D01G329400.1	Wheat	extracellular	37.72	45.57
TraesCS4D01G037500.1	Wheat	extracellular	39.24	45.45
TraesCS4D01G037100.1	Wheat	extracellular	39.24	45.45
TraesCS4D01G037000.1	Wheat	extracellular	39.24	45.45
TraesCS4D01G036900.1	Wheat	extracellular	39.24	45.45
TraesCS4D01G036700.1	Wheat	extracellular	38.99	45.16
TraesCS6D01G328600.1	Wheat	extracellular	38.23	44.54
TraesCS4D01G036600.1	Wheat	extracellular	28.35	42.11
TraesCS2D01G547600.1	Wheat	cytosol, mitochondrion, nucleus, plastid	38.23	41.03
TraesCS6D01G259900.1	Wheat	plastid	38.73	40.48
TraesCS2D01G513600.1	Wheat	endoplasmic reticulum, golgi, vacuole	43.04	36.72
TraesCS6D01G329300.1	Wheat	extracellular	29.11	36.16
TraesCS2D01G547800.1	Wheat	endoplasmic reticulum, extracellular	42.78	36.11
TraesCS5D01G149800.1	Wheat	endoplasmic reticulum	42.78	36.11
TraesCS2D01G546600.1	Wheat	plasma membrane, vacuole	42.78	35.58
TraesCS7D01G265100.1	Wheat	cytosol, nucleus, plastid	23.04	35.27
TraesCS4D01G036800.1	Wheat	extracellular	12.91	34.46
TraesCS1D01G327000.1	Wheat	extracellular	39.24	34.14
TraesCS2D01G053700.1	Wheat	extracellular	8.35	27.05

Protein Annotations

MapMan:19.4.1.1	Gene3D:3.90.70.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0006508	GO:GO:0008150
GO:GO:0008152	GO:GO:0008234	GO:GO:0016787	GO:GO:0019538	PFAM:PF00112	PFAM:PF08246
PRINTS:PR00705	ScanProsite:PS00139	ScanProsite:PS00639	ScanProsite:PS00640	PANTHER:PTHR12411	PANTHER:PTHR12411:SF366
InterPro:Papain_like_cys_pep_sf	InterPro:Pept_asp_AS	InterPro:Pept_cys_AS	InterPro:Pept_his_AS	InterPro:Peptidase_C1A	InterPro:Peptidase_C1A_C
InterPro:Prot_inhib_I29	SMART:SM00645	SMART:SM00848	SUPFAM:SSF54001	SignalP:SignalP-noTM	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS3D01G342100	EnsemblPlants:TraesCS3D01G342100.2	TIGR:cd02248	SEG:seg	:	:

Description

No Description!

Coordinates

chr3D:-:454980267..454981454

Molecular Weight (calculated)

43255.1 Da

IEP (calculated)

7.977

GRAVY (calculated)

-0.338

Length

395 amino acids

Sequence
(BLAST)

001: MARAIVLAAT MAAAALFMLL AAAPAPASAM DFGEHDLASE DSLWALYERW REQHTVARDL ADKARRFNVF RENVRLIHEF NRGDAPYKLR LNRFGDMTAD
101: EFRRAYASSR VSHHRMFSRK EGGGGFMHGS ARDVPPSVDW RQKGAVTAVK DQGQCGSCWA FSTIAAVEGI NAIRTKNLTS LSEQQLVDCD TKSNAGCNGG
201: LMDYAFQYIA KHGGVAAEDA YPYKARQASS CNKKPSAVVT IDGYEDVPAN DEAALKKAVA AQPVAVAIEA SGSHFQFYSE GVFAGKCGTE LDHGVTAVGY
301: GATVDGTKYW IVKNSWGPEW GEKGYIRMKR DVEDKEGLCG IAMEASFFWK KGHTPASASE RCIRLILLKL THEPQSHGGV LPRQDLSQPK AFWCP

Best Arabidopsis Sequence Match ( AT1G20850.1 )
(BLAST)

001: MALSSPSRIL CFALALSAAS LSLSFASSHD YSIVGYSPED LESHDKLIEL FENWISNFEK AYETVEEKFL RFEVFKDNLK HIDETNKKGK SYWLGLNEFA
101: DLSHEEFKKM YLGLKTDIVR RDEERSYAEF AYRDVEAVPK SVDWRKKGAV AEVKNQGSCG SCWAFSTVAA VEGINKIVTG NLTTLSEQEL IDCDTTYNNG
201: CNGGLMDYAF EYIVKNGGLR KEEDYPYSME EGTCEMQKDE SETVTINGHQ DVPTNDEKSL LKALAHQPLS VAIDASGREF QFYSGGVFDG RCGVDLDHGV
301: AAVGYGSSKG SDYIIVKNSW GPKWGEKGYI RLKRNTGKPE GLCGINKMAS FPTKTK

Arabidopsis Description

XCP2Cysteine protease XCP2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LM66]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.