Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- golgi 4
- plasma membrane 4
- endoplasmic reticulum 5
- vacuole 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G391500.1 | Wheat | endoplasmic reticulum, extracellular | 97.39 | 97.11 |
| HORVU5Hr1G095580.1 | Barley | endoplasmic reticulum, extracellular | 93.04 | 91.98 |
| Zm00001d013261_P001 | Maize | extracellular | 77.39 | 78.3 |
| EER93437 | Sorghum | endoplasmic reticulum | 80.0 | 78.19 |
| TraesCS6D01G144100.1 | Wheat | cytosol | 52.46 | 59.93 |
| TraesCS6D01G144000.1 | Wheat | endoplasmic reticulum, extracellular | 57.39 | 57.89 |
| TraesCS1D01G225100.1 | Wheat | extracellular | 54.78 | 55.75 |
| TraesCS6D01G328100.1 | Wheat | extracellular | 54.49 | 55.46 |
| TraesCS5D01G076500.1 | Wheat | endoplasmic reticulum, extracellular | 53.91 | 55.36 |
| TraesCS6D01G328000.1 | Wheat | extracellular | 54.2 | 55.16 |
| TraesCS7D01G471400.1 | Wheat | extracellular | 54.2 | 55.0 |
| TraesCS7D01G220000.1 | Wheat | extracellular | 54.2 | 55.0 |
| TraesCS6D01G329600.1 | Wheat | extracellular | 53.91 | 54.87 |
| TraesCS6D01G329500.1 | Wheat | extracellular | 53.91 | 54.87 |
| TraesCS6D01G328300.1 | Wheat | extracellular | 53.91 | 54.87 |
| TraesCS6D01G328600.1 | Wheat | extracellular | 53.33 | 54.28 |
| TraesCS6D01G328500.1 | Wheat | extracellular | 53.33 | 54.28 |
| TraesCS6D01G329900.1 | Wheat | extracellular | 53.33 | 54.28 |
| CDY58055 | Canola | golgi, nucleus, plastid | 50.14 | 53.73 |
| TraesCS4D01G037300.1 | Wheat | extracellular | 53.04 | 53.67 |
| TraesCS6D01G329400.1 | Wheat | extracellular | 50.72 | 53.52 |
| Bra021998.1-P | Field mustard | endoplasmic reticulum | 53.33 | 53.18 |
| CDX87758 | Canola | endoplasmic reticulum | 53.33 | 53.18 |
| CDY50483 | Canola | endoplasmic reticulum | 53.33 | 53.18 |
| TraesCS4D01G036600.1 | Wheat | extracellular | 40.87 | 53.01 |
| TraesCS4D01G036900.1 | Wheat | extracellular | 51.59 | 52.2 |
| TraesCS4D01G037200.1 | Wheat | extracellular | 51.59 | 52.2 |
| AT5G45890.1 | Thale cress | endoplasmic reticulum, golgi | 52.17 | 52.02 |
| TraesCS4D01G037100.1 | Wheat | extracellular | 51.3 | 51.91 |
| TraesCS4D01G037500.1 | Wheat | extracellular | 51.3 | 51.91 |
| Bra025046.1-P | Field mustard | endoplasmic reticulum, extracellular | 51.59 | 51.74 |
| TraesCS4D01G037000.1 | Wheat | extracellular | 51.01 | 51.61 |
| TraesCS4D01G036700.1 | Wheat | extracellular | 51.01 | 51.61 |
| CDX77621 | Canola | endoplasmic reticulum, extracellular | 50.43 | 50.73 |
| TraesCS4D01G037400.1 | Wheat | extracellular | 47.54 | 50.0 |
| PGSC0003DMT400026448 | Potato | endoplasmic reticulum, extracellular, vacuole | 49.86 | 49.57 |
| Solyc02g076910.2.1 | Tomato | extracellular, golgi | 50.14 | 49.29 |
| TraesCS4D01G036800.1 | Wheat | extracellular | 20.0 | 46.62 |
| TraesCS3D01G340500.1 | Wheat | endoplasmic reticulum | 48.41 | 45.88 |
| TraesCS5D01G152400.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 47.25 | 45.79 |
| TraesCS1D01G026500.1 | Wheat | endoplasmic reticulum | 46.09 | 45.3 |
| TraesCS3D01G407700.1 | Wheat | endoplasmic reticulum | 48.41 | 44.53 |
| TraesCS3D01G407600.1 | Wheat | endoplasmic reticulum | 47.83 | 43.77 |
| TraesCS4D01G074800.1 | Wheat | endoplasmic reticulum | 46.38 | 43.01 |
| TraesCS6D01G329300.1 | Wheat | extracellular | 38.55 | 41.82 |
| TraesCS3D01G342100.2 | Wheat | endoplasmic reticulum | 47.54 | 41.52 |
| TraesCS6D01G259900.1 | Wheat | plastid | 43.77 | 39.95 |
| TraesCS2D01G547600.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 40.58 | 38.04 |
| TraesCS2D01G053700.1 | Wheat | extracellular | 12.75 | 36.07 |
| TraesCS2D01G547800.1 | Wheat | endoplasmic reticulum, extracellular | 47.54 | 35.04 |
| TraesCS5D01G149800.1 | Wheat | endoplasmic reticulum | 46.38 | 34.19 |
| TraesCS2D01G513600.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 45.22 | 33.69 |
| TraesCS2D01G546600.1 | Wheat | plasma membrane, vacuole | 44.93 | 32.63 |
| TraesCS1D01G327000.1 | Wheat | extracellular | 42.32 | 32.16 |
| TraesCS7D01G265100.1 | Wheat | cytosol, nucleus, plastid | 22.61 | 30.23 |
Protein Annotations
| Gene3D:3.90.70.10 | MapMan:50.3.4 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0006508 | GO:GO:0006950 |
| GO:GO:0007275 | GO:GO:0007568 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008219 | GO:GO:0008234 |
| GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009626 | GO:GO:0009628 | GO:GO:0009719 | GO:GO:0009733 |
| GO:GO:0009735 | GO:GO:0009744 | GO:GO:0009749 | GO:GO:0009750 | GO:GO:0009791 | GO:GO:0009817 |
| GO:GO:0009908 | GO:GO:0009987 | GO:GO:0010150 | GO:GO:0010224 | GO:GO:0010282 | GO:GO:0010623 |
| GO:GO:0016787 | GO:GO:0019538 | GO:GO:0030154 | GO:GO:0080187 | GO:GO:1990169 | PFAM:PF00112 |
| PFAM:PF08246 | PRINTS:PR00705 | ScanProsite:PS00139 | ScanProsite:PS00639 | ScanProsite:PS00640 | PANTHER:PTHR12411 |
| PANTHER:PTHR12411:SF418 | InterPro:Papain_like_cys_pep_sf | InterPro:Pept_asp_AS | InterPro:Pept_cys_AS | InterPro:Pept_his_AS | InterPro:Peptidase_C1A |
| InterPro:Peptidase_C1A_C | InterPro:Prot_inhib_I29 | SMART:SM00645 | SMART:SM00848 | SUPFAM:SSF54001 | SignalP:SignalP-noTM |
| EnsemblPlantsGene:TraesCS5D01G401300 | EnsemblPlants:TraesCS5D01G401300.1 | TIGR:cd02248 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr5D:-:466569222..466570660
Molecular Weight (calculated)
36533.7 Da
IEP (calculated)
5.702
GRAVY (calculated)
-0.174
Length
345 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLPTLIFAL LVVSSAVAAP RAHAARELAG NDAIAVDAAM VSRHEKWMAE HGRTYADEEE KARRLEVFRA NAKFIDSFNA AEESSHRLAT NRFADLTDEE
101: FRAARTGLRP VAGAGSGAGG FRYENFSLAD AAGSMDWRAM GAVTGVKDQG SCGCCWAFSA VAAVEGLTKI RTGRLVSLSE QQLVDCDVNG DDEGCAGGLM
201: DNAFEYMVRR GGLTTESSYP YRGTDGSCRR SASAASIRGY EDVPANNEAA LMAAVAHQPV SVAINGGDSV FRFYDSGVLG GSGCGTELNH AITAVGYGTA
301: SDGSKYWIMK NSWGASWGER GYVRIRRGVR GEGVCGLAQL ASYPV
101: FRAARTGLRP VAGAGSGAGG FRYENFSLAD AAGSMDWRAM GAVTGVKDQG SCGCCWAFSA VAAVEGLTKI RTGRLVSLSE QQLVDCDVNG DDEGCAGGLM
201: DNAFEYMVRR GGLTTESSYP YRGTDGSCRR SASAASIRGY EDVPANNEAA LMAAVAHQPV SVAINGGDSV FRFYDSGVLG GSGCGTELNH AITAVGYGTA
301: SDGSKYWIMK NSWGASWGER GYVRIRRGVR GEGVCGLAQL ASYPV
001: MCDSFINNKM TSILFMLVSL TILSMNLKVS QATSRVTFHE PIVAEHHQQW MTRFSRVYSD ELEKQMRFDV FKKNLKFIEK FNKKGDRTYK LGVNEFADWT
101: REEFIATHTG LKGVNGIPSS EFVDEMIPSW NWNVSDVAGR ETKDWRYEGA VTPVKYQGQC GCCWAFSSVA AVEGLTKIVG NNLVSLSEQQ LLDCDRERDN
201: GCNGGIMSDA FSYIIKNRGI ASEASYPYQA AEGTCRYNGK PSAWIRGFQT VPSNNERALL EAVSKQPVSV SIDADGPGFM HYSGGVYDEP YCGTNVNHAV
301: TFVGYGTSPE GIKYWLAKNS WGETWGENGY IRIRRDVAWP QGMCGVAQYA FYPVA
101: REEFIATHTG LKGVNGIPSS EFVDEMIPSW NWNVSDVAGR ETKDWRYEGA VTPVKYQGQC GCCWAFSSVA AVEGLTKIVG NNLVSLSEQQ LLDCDRERDN
201: GCNGGIMSDA FSYIIKNRGI ASEASYPYQA AEGTCRYNGK PSAWIRGFQT VPSNNERALL EAVSKQPVSV SIDADGPGFM HYSGGVYDEP YCGTNVNHAV
301: TFVGYGTSPE GIKYWLAKNS WGETWGENGY IRIRRDVAWP QGMCGVAQYA FYPVA
Arabidopsis Description
Cysteine proteinases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q84W75]
SUBAcon: [extracellular,endoplasmic reticulum,plastid]
SUBAcon: [extracellular,endoplasmic reticulum,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.