Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 5
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY58055 | Canola | golgi, nucleus, plastid | 86.01 | 91.61 |
| CDY50483 | Canola | endoplasmic reticulum | 76.97 | 76.3 |
| CDX87758 | Canola | endoplasmic reticulum | 76.68 | 76.01 |
| AT5G45890.1 | Thale cress | endoplasmic reticulum, golgi | 73.47 | 72.83 |
| PGSC0003DMT400026448 | Potato | endoplasmic reticulum, extracellular, vacuole | 53.94 | 53.31 |
| Solyc02g076910.2.1 | Tomato | extracellular, golgi | 53.35 | 52.14 |
| TraesCS5D01G401300.1 | Wheat | extracellular | 50.73 | 50.43 |
| TraesCS5A01G391500.1 | Wheat | endoplasmic reticulum, extracellular | 50.73 | 50.29 |
| CDY39574 | Canola | cytosol, endoplasmic reticulum, nucleus | 42.57 | 49.66 |
| HORVU5Hr1G095580.1 | Barley | endoplasmic reticulum, extracellular | 50.15 | 49.28 |
| CDX75496 | Canola | endoplasmic reticulum | 48.98 | 47.19 |
| Zm00001d013261_P001 | Maize | extracellular | 46.36 | 46.63 |
| EER93437 | Sorghum | endoplasmic reticulum | 47.81 | 46.46 |
| CDY31861 | Canola | endoplasmic reticulum | 46.65 | 45.33 |
| CDX83168 | Canola | endoplasmic reticulum | 47.23 | 44.88 |
| CDY34045 | Canola | endoplasmic reticulum | 47.23 | 44.88 |
| CDY01351 | Canola | endoplasmic reticulum | 45.77 | 44.73 |
| CDX96617 | Canola | endoplasmic reticulum | 42.57 | 44.65 |
| CDY33651 | Canola | endoplasmic reticulum | 42.27 | 44.48 |
| CDX69132 | Canola | plastid | 48.98 | 44.21 |
| CDY17193 | Canola | endoplasmic reticulum | 40.82 | 44.03 |
| CDY48168 | Canola | endoplasmic reticulum | 46.06 | 44.01 |
| CDX75633 | Canola | vacuole | 44.61 | 40.91 |
| CDY39575 | Canola | endoplasmic reticulum | 43.44 | 40.49 |
| CDX69285 | Canola | endoplasmic reticulum, vacuole | 44.02 | 40.37 |
| CDY22445 | Canola | vacuole | 44.02 | 40.37 |
| CDY44047 | Canola | vacuole | 43.73 | 39.06 |
| CDY37617 | Canola | endoplasmic reticulum, extracellular | 41.4 | 38.38 |
| CDY25281 | Canola | extracellular | 40.82 | 37.74 |
| CDY25283 | Canola | vacuole | 40.82 | 37.53 |
| CDY63262 | Canola | extracellular, plasma membrane, vacuole | 27.11 | 37.5 |
| CDY50157 | Canola | endoplasmic reticulum, extracellular, vacuole | 47.23 | 36.08 |
| CDY16132 | Canola | endoplasmic reticulum, extracellular, vacuole | 39.65 | 35.88 |
| CDX95457 | Canola | endoplasmic reticulum, extracellular, vacuole | 46.94 | 35.86 |
| CDY63586 | Canola | endoplasmic reticulum | 47.52 | 35.51 |
| CDY46179 | Canola | endoplasmic reticulum | 46.36 | 35.33 |
| CDY17044 | Canola | endoplasmic reticulum | 47.23 | 35.29 |
| CDX71540 | Canola | extracellular | 46.94 | 35.0 |
| CDY22370 | Canola | extracellular | 46.94 | 35.0 |
| CDY31498 | Canola | cytosol | 30.32 | 34.78 |
| CDY50154 | Canola | endoplasmic reticulum | 44.61 | 34.77 |
| CDX95451 | Canola | endoplasmic reticulum, extracellular, vacuole | 44.61 | 34.77 |
| CDY06760 | Canola | endoplasmic reticulum | 46.06 | 34.57 |
| CDY25228 | Canola | extracellular | 46.36 | 34.57 |
| CDY17093 | Canola | endoplasmic reticulum | 45.19 | 33.92 |
| CDX93470 | Canola | plasma membrane | 43.15 | 33.41 |
| CDX94938 | Canola | extracellular, vacuole | 42.86 | 33.26 |
| CDX99227 | Canola | endoplasmic reticulum | 46.06 | 31.16 |
| CDY27951 | Canola | endoplasmic reticulum | 38.19 | 28.54 |
| CDY02431 | Canola | nucleus | 35.28 | 26.95 |
Protein Annotations
| MapMan:19.4.1.1 | Gene3D:3.90.70.10 | ProteinID:AAM73807.1 | unigene:Bna.580 | EnsemblPlants:CDX77621 | ProteinID:CDX77621 |
| ProteinID:CDX77621.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008233 | GO:GO:0008234 | GO:GO:0016787 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00128547001 | MEROPS:I29.003 |
| PFAM:PF00112 | PFAM:PF08246 | PRINTS:PR00705 | ScanProsite:PS00139 | ScanProsite:PS00639 | ScanProsite:PS00640 |
| PANTHER:PTHR12411 | PANTHER:PTHR12411:SF297 | InterPro:Papain_like_cys_pep_sf | InterPro:Pept_asp_AS | InterPro:Pept_cys_AS | InterPro:Pept_his_AS |
| InterPro:Peptidase_C1A | InterPro:Peptidase_C1A_C | InterPro:Prot_inhib_I29 | GO:Q8L588 | UniProt:Q8L588 | SMART:SM00645 |
| SMART:SM00848 | SUPFAM:SSF54001 | SignalP:SignalP-noTM | UniParc:UPI00000AAB56 | SEG:seg | : |
Description
BnaC07g18750DBnaC07g18750D protein [Source:UniProtKB/TrEMBL;Acc:Q8L588]
Coordinates
chrLK031812:+:179905..181832
Molecular Weight (calculated)
37655.6 Da
IEP (calculated)
8.922
GRAVY (calculated)
-0.370
Length
343 amino acids
Sequence
(BLAST)
(BLAST)
001: MALTQIQIFL IVSLVSSFSL STTLSRPLDE VTMQKRHAAW MTEHGRVYAD ANEKNNRYVV FKRNVESIER LNEVQYGLTF KLAVNQFADL TNEEFRSMYT
101: GYKGNSVLSS RTKPTSFRYQ HVSSDALPIS VDWRKKGAVT PIKDQGSCGS CWAFSAVAAI EGVAQIKKGK LISLSEQELV DCDTNDDGCM GGYMNSAFNY
201: TMTTGGLTSE SNYPYKSTDG TCNINKTKQI ATSIKGFEDV PANDEKALMK AVAHHPVSIG IAGGGTGFQF YSSGVFSGEC STHLDHGVAV VGYGKSSNGS
301: KYWILKNSWG PKWGERGYMR IKKDTKAKHG QCGLAMNASY PTM
101: GYKGNSVLSS RTKPTSFRYQ HVSSDALPIS VDWRKKGAVT PIKDQGSCGS CWAFSAVAAI EGVAQIKKGK LISLSEQELV DCDTNDDGCM GGYMNSAFNY
201: TMTTGGLTSE SNYPYKSTDG TCNINKTKQI ATSIKGFEDV PANDEKALMK AVAHHPVSIG IAGGGTGFQF YSSGVFSGEC STHLDHGVAV VGYGKSSNGS
301: KYWILKNSWG PKWGERGYMR IKKDTKAKHG QCGLAMNASY PTM
001: MALKHMQIFL FVAIFSSFCF SITLSRPLDN ELIMQKRHIE WMTKHGRVYA DVKEENNRYV VFKNNVERIE HLNSIPAGRT FKLAVNQFAD LTNDEFRSMY
101: TGFKGVSALS SQSQTKMSPF RYQNVSSGAL PVSVDWRKKG AVTPIKNQGS CGCCWAFSAV AAIEGATQIK KGKLISLSEQ QLVDCDTNDF GCEGGLMDTA
201: FEHIKATGGL TTESNYPYKG EDATCNSKKT NPKATSITGY EDVPVNDEQA LMKAVAHQPV SVGIEGGGFD FQFYSSGVFT GECTTYLDHA VTAIGYGEST
301: NGSKYWIIKN SWGTKWGESG YMRIQKDVKD KQGLCGLAMK ASYPTI
101: TGFKGVSALS SQSQTKMSPF RYQNVSSGAL PVSVDWRKKG AVTPIKNQGS CGCCWAFSAV AAIEGATQIK KGKLISLSEQ QLVDCDTNDF GCEGGLMDTA
201: FEHIKATGGL TTESNYPYKG EDATCNSKKT NPKATSITGY EDVPVNDEQA LMKAVAHQPV SVGIEGGGFD FQFYSSGVFT GECTTYLDHA VTAIGYGEST
301: NGSKYWIIKN SWGTKWGESG YMRIQKDVKD KQGLCGLAMK ASYPTI
Arabidopsis Description
SAG12Senescence-specific cysteine protease SAG12 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ47]
SUBAcon: [endoplasmic reticulum,golgi]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.