Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G20850.1 | CDY37530 | AT3G01340.1 | 21798944 |
| AT1G20850.1 | CDY49046 | AT3G01340.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY31861 | Canola | endoplasmic reticulum | 73.91 | 62.61 |
| CDY01351 | Canola | endoplasmic reticulum | 72.91 | 62.11 |
| AT1G20850.1 | Thale cress | endoplasmic reticulum | 71.57 | 60.11 |
| CDY33651 | Canola | endoplasmic reticulum | 64.21 | 58.9 |
| CDX96617 | Canola | endoplasmic reticulum | 64.21 | 58.72 |
| KRH60879 | Soybean | endoplasmic reticulum | 60.2 | 51.58 |
| KRH60878 | Soybean | endoplasmic reticulum | 59.87 | 51.29 |
| KRH51560 | Soybean | endoplasmic reticulum | 59.87 | 51.14 |
| KRH51561 | Soybean | endoplasmic reticulum | 59.87 | 51.14 |
| VIT_18s0122g00790.t01 | Wine grape | nucleus | 56.52 | 50.3 |
| Solyc12g094700.1.1 | Tomato | extracellular | 54.18 | 48.94 |
| Solyc04g082710.2.1 | Tomato | cytosol | 49.83 | 48.85 |
| PGSC0003DMT400075600 | Potato | vacuole | 56.19 | 48.14 |
| PGSC0003DMT400025691 | Potato | endoplasmic reticulum, extracellular | 56.52 | 47.47 |
| TraesCS1B01G033200.1 | Wheat | endoplasmic reticulum, extracellular, golgi | 55.85 | 47.44 |
| TraesCS1A01G027300.1 | Wheat | endoplasmic reticulum | 55.52 | 47.29 |
| TraesCS1D01G026500.1 | Wheat | endoplasmic reticulum | 55.52 | 47.29 |
| TraesCS5B01G138300.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 55.52 | 46.63 |
| TraesCS5D01G152400.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 55.52 | 46.63 |
| CDX75496 | Canola | endoplasmic reticulum | 55.18 | 46.35 |
| Os05t0108600-01 | Rice | extracellular | 55.18 | 46.09 |
| GSMUA_Achr3P03740_001 | Banana | endoplasmic reticulum | 54.18 | 45.89 |
| EES02142 | Sorghum | vacuole | 56.86 | 44.97 |
| Os01t0971400-01 | Rice | extracellular | 54.85 | 44.93 |
| Zm00001d011787_P001 | Maize | extracellular | 57.19 | 44.42 |
| TraesCS5A01G138700.1 | Wheat | plastid | 55.52 | 44.03 |
| KXG21060 | Sorghum | endoplasmic reticulum, golgi, vacuole | 54.18 | 43.67 |
| CDX69132 | Canola | plastid | 55.18 | 43.42 |
| HORVU1Hr1G003940.6 | Barley | endoplasmic reticulum | 53.51 | 43.36 |
| Zm00001d035689_P001 | Maize | extracellular | 53.18 | 42.18 |
| Os02t0715000-01 | Rice | endoplasmic reticulum | 48.83 | 39.89 |
| HORVU6Hr1G070320.2 | Barley | endoplasmic reticulum, extracellular | 48.16 | 39.56 |
| TraesCS6B01G308300.1 | Wheat | extracellular, vacuole | 47.49 | 39.55 |
| TraesCS6A01G279500.1 | Wheat | endoplasmic reticulum, extracellular | 47.49 | 39.44 |
| EES07368 | Sorghum | extracellular | 46.15 | 38.76 |
| TraesCS6D01G259900.1 | Wheat | plastid | 47.83 | 37.83 |
| CDY17193 | Canola | endoplasmic reticulum | 40.13 | 37.74 |
| Zm00001d017834_P001 | Maize | extracellular | 38.13 | 36.66 |
| CDY39574 | Canola | cytosol, endoplasmic reticulum, nucleus | 35.45 | 36.05 |
| CDY63262 | Canola | extracellular, plasma membrane, vacuole | 28.09 | 33.87 |
| CDY34045 | Canola | endoplasmic reticulum | 39.8 | 32.96 |
| CDX83168 | Canola | endoplasmic reticulum | 39.8 | 32.96 |
| CDY48168 | Canola | endoplasmic reticulum | 39.13 | 32.59 |
| CDY58055 | Canola | golgi, nucleus, plastid | 34.45 | 31.99 |
| CDX75633 | Canola | vacuole | 39.13 | 31.28 |
| CDY25281 | Canola | extracellular | 38.8 | 31.27 |
| CDY37617 | Canola | endoplasmic reticulum, extracellular | 38.46 | 31.08 |
| CDY22445 | Canola | vacuole | 38.46 | 30.75 |
| CDY50483 | Canola | endoplasmic reticulum | 35.45 | 30.64 |
| CDY25283 | Canola | vacuole | 38.13 | 30.56 |
| CDX87758 | Canola | endoplasmic reticulum | 35.12 | 30.35 |
| CDY16132 | Canola | endoplasmic reticulum, extracellular, vacuole | 38.46 | 30.34 |
| CDX77621 | Canola | endoplasmic reticulum, extracellular | 34.78 | 30.32 |
| CDX69285 | Canola | endoplasmic reticulum, vacuole | 37.79 | 30.21 |
| CDY39575 | Canola | endoplasmic reticulum | 37.12 | 30.16 |
| CDY44047 | Canola | vacuole | 37.79 | 29.43 |
| CDY17093 | Canola | endoplasmic reticulum | 44.48 | 29.1 |
| CDY06760 | Canola | endoplasmic reticulum | 43.81 | 28.67 |
| CDY50154 | Canola | endoplasmic reticulum | 42.14 | 28.64 |
| CDX95451 | Canola | endoplasmic reticulum, extracellular, vacuole | 41.14 | 27.95 |
| CDY63586 | Canola | endoplasmic reticulum | 42.47 | 27.67 |
| CDY17044 | Canola | endoplasmic reticulum | 42.47 | 27.67 |
| CDX71540 | Canola | extracellular | 42.47 | 27.61 |
| CDY22370 | Canola | extracellular | 42.47 | 27.61 |
| CDX95457 | Canola | endoplasmic reticulum, extracellular, vacuole | 41.14 | 27.39 |
| CDY50157 | Canola | endoplasmic reticulum, extracellular, vacuole | 41.14 | 27.39 |
| CDY25228 | Canola | extracellular | 42.14 | 27.39 |
| CDY46179 | Canola | endoplasmic reticulum | 41.14 | 27.33 |
| CDX94938 | Canola | extracellular, vacuole | 37.12 | 25.11 |
| CDX93470 | Canola | plasma membrane | 37.12 | 25.06 |
| CDX99227 | Canola | endoplasmic reticulum | 41.47 | 24.46 |
| CDY02431 | Canola | nucleus | 34.78 | 23.16 |
| CDY27951 | Canola | endoplasmic reticulum | 32.78 | 21.35 |
Protein Annotations
| Gene3D:3.90.70.10 | MapMan:50.3.4 | GO:A0A078H3U2 | UniProt:A0A078H3U2 | EnsemblPlants:CDY31498 | ProteinID:CDY31498 |
| ProteinID:CDY31498.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008234 | GO:GO:0016787 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00047789001 | PFAM:PF00112 | PFAM:PF08246 |
| ScanProsite:PS00139 | PANTHER:PTHR12411 | PANTHER:PTHR12411:SF357 | InterPro:Papain_like_cys_pep_sf | InterPro:Pept_cys_AS | InterPro:Peptidase_C1A |
| InterPro:Peptidase_C1A_C | InterPro:Prot_inhib_I29 | SMART:SM00645 | SMART:SM00848 | SUPFAM:SSF54001 | UniParc:UPI0004EEB41F |
Description
BnaC05g16070DBnaC05g16070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H3U2]
Coordinates
chrLK032273:+:335049..340025
Molecular Weight (calculated)
33711.7 Da
IEP (calculated)
5.255
GRAVY (calculated)
-0.459
Length
299 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLNQPGKLA GRVVERDSQD LIQISNPNGS LFAYKNPLFC SCFIGCISVP LIRSASHDFS IVGYSPEDLE AHDKHIELFE NWLSNFEKAY ETVEEKLRRF
101: EVFKDNLKHI DETNKKVKSY WLGLNEFADL SHKEFKNKYY LGFKTDIARH DAVSYVKNQG SCGSCWAFST VAAMEGINKI VTGNLKTLSE QELIDCGTTF
201: NGGLMDYAFE YIVKNGGLRK EENYPYSMEE GTCETQKDDS EMVNISGHQN VPRNDDKSLL KALAHQPLSI AIDASGREFQ FYKGGVFDGR CGVDLDRAG
101: EVFKDNLKHI DETNKKVKSY WLGLNEFADL SHKEFKNKYY LGFKTDIARH DAVSYVKNQG SCGSCWAFST VAAMEGINKI VTGNLKTLSE QELIDCGTTF
201: NGGLMDYAFE YIVKNGGLRK EENYPYSMEE GTCETQKDDS EMVNISGHQN VPRNDDKSLL KALAHQPLSI AIDASGREFQ FYKGGVFDGR CGVDLDRAG
001: MALSSPSRIL CFALALSAAS LSLSFASSHD YSIVGYSPED LESHDKLIEL FENWISNFEK AYETVEEKFL RFEVFKDNLK HIDETNKKGK SYWLGLNEFA
101: DLSHEEFKKM YLGLKTDIVR RDEERSYAEF AYRDVEAVPK SVDWRKKGAV AEVKNQGSCG SCWAFSTVAA VEGINKIVTG NLTTLSEQEL IDCDTTYNNG
201: CNGGLMDYAF EYIVKNGGLR KEEDYPYSME EGTCEMQKDE SETVTINGHQ DVPTNDEKSL LKALAHQPLS VAIDASGREF QFYSGGVFDG RCGVDLDHGV
301: AAVGYGSSKG SDYIIVKNSW GPKWGEKGYI RLKRNTGKPE GLCGINKMAS FPTKTK
101: DLSHEEFKKM YLGLKTDIVR RDEERSYAEF AYRDVEAVPK SVDWRKKGAV AEVKNQGSCG SCWAFSTVAA VEGINKIVTG NLTTLSEQEL IDCDTTYNNG
201: CNGGLMDYAF EYIVKNGGLR KEEDYPYSME EGTCEMQKDE SETVTINGHQ DVPTNDEKSL LKALAHQPLS VAIDASGREF QFYSGGVFDG RCGVDLDHGV
301: AAVGYGSSKG SDYIIVKNSW GPKWGEKGYI RLKRNTGKPE GLCGINKMAS FPTKTK
Arabidopsis Description
XCP2Cysteine protease XCP2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LM66]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.