Factsheet for Os05t0108600-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 6
vacuole 6
plasma membrane 5
golgi 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	extracellular
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	golgi

extracellular: 25047395

msms PMID: 25047395 doi

JY Kim, J Wu, SJ Kwon, H Oh, SE Lee, SG Kim, Y Wang, GK Agrawal, R Rakwal, KY Kang, IP Ahn, BG Kim, ST Kim

Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang, South Korea.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0135800-02

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G20850.1	Os02t0135800-02	AT3G01340.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G027300.1	Wheat	endoplasmic reticulum	77.93	79.49
TraesCS1B01G033200.1	Wheat	endoplasmic reticulum, extracellular, golgi	77.93	79.26
TraesCS1D01G026500.1	Wheat	endoplasmic reticulum	77.65	79.2
TraesCS5D01G152400.1	Wheat	endoplasmic reticulum, golgi, vacuole	76.54	76.97
TraesCS5B01G138300.1	Wheat	endoplasmic reticulum, golgi, vacuole	76.26	76.69
Os01t0971400-01	Rice	extracellular	77.93	76.44
KXG21060	Sorghum	endoplasmic reticulum, golgi, vacuole	79.05	76.28
Zm00001d035689_P001	Maize	extracellular	77.09	73.21
TraesCS5A01G138700.1	Wheat	plastid	76.26	72.41
GSMUA_Achr2P04950_001	Banana	endoplasmic reticulum, golgi	69.55	71.35
Solyc04g082710.2.1	Tomato	cytosol	58.94	69.18
VIT_18s0122g00790.t01	Wine grape	nucleus	64.53	68.75
VIT_03s0038g04000.t01	Wine grape	vacuole	67.32	68.47
CDY31861	Canola	endoplasmic reticulum	67.04	67.99
CDY01351	Canola	endoplasmic reticulum	66.48	67.81
Bra012252.1-P	Field mustard	endoplasmic reticulum	66.48	67.61
KRH60879	Soybean	endoplasmic reticulum	65.64	67.34
Bra016447.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	67.32	67.32
AT1G20850.1	Thale cress	endoplasmic reticulum	66.76	67.13
Solyc12g094700.1.1	Tomato	extracellular	62.01	67.07
KRH60878	Soybean	endoplasmic reticulum	65.36	67.05
KRH51560	Soybean	endoplasmic reticulum	65.36	66.86
GSMUA_Achr3P03740_001	Banana	endoplasmic reticulum	65.64	66.57
KRH51561	Soybean	endoplasmic reticulum	64.53	66.0
CDY33651	Canola	endoplasmic reticulum	60.06	65.95
AT4G35350.1	Thale cress	endoplasmic reticulum	65.08	65.63
CDX75496	Canola	endoplasmic reticulum	65.08	65.45
Bra011608.1-P	Field mustard	endoplasmic reticulum	65.08	65.45
CDX96617	Canola	endoplasmic reticulum	59.5	65.14
PGSC0003DMT400025691	Potato	endoplasmic reticulum, extracellular	64.53	64.89
PGSC0003DMT400075600	Potato	vacuole	63.13	64.76
HORVU1Hr1G003940.6	Barley	endoplasmic reticulum	64.53	62.6
CDX69132	Canola	plastid	65.36	61.58
GSMUA_Achr3P11680_001	Banana	endoplasmic reticulum, vacuole	64.8	59.34
Os02t0715000-01	Rice	endoplasmic reticulum	58.94	57.65
CDY31498	Canola	cytosol	46.09	55.18
Os01t0907600-01	Rice	extracellular	49.16	47.44
Os04t0208200-01	Rice	extracellular	46.09	47.28
Os08t0556900-01	Rice	extracellular	50.84	47.27
Os11t0255300-01	Rice	extracellular	49.72	47.09
Os04t0206300-00	Rice	extracellular	44.13	46.61
Os12t0273800-00	Rice	extracellular	44.69	45.71
Os04t0670500-01	Rice	extracellular	49.44	36.12
Os04t0670200-02	Rice	extracellular	48.32	35.16
Os05t0508300-01	Rice	plasma membrane	43.02	34.22

Protein Annotations

MapMan:19.4.1.1	MapMan:27.2.10	Gene3D:3.90.70.10	EntrezGene:4337582	ProteinID:AAU44138.1	EMBL:AY335487
ProteinID:BAF16347.1	ProteinID:BAS91900.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004197	GO:GO:0005575
GO:GO:0005576	GO:GO:0005615	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005764
GO:GO:0005773	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008234
GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0051603	EnsemblPlantsGene:Os05g0108600
EnsemblPlants:Os05t0108600-01	PFAM:PF00112	PFAM:PF08246	PRINTS:PR00705	ScanProsite:PS00139	ScanProsite:PS00639
ScanProsite:PS00640	PFscan:PS51257	PANTHER:PTHR12411	PANTHER:PTHR12411:SF427	InterPro:Papain_like_cys_pep_sf	InterPro:Pept_asp_AS
InterPro:Pept_cys_AS	InterPro:Pept_his_AS	InterPro:Peptidase_C1A	InterPro:Peptidase_C1A_C	InterPro:Prot_inhib_I29	UniProt:Q7XBA4
SMART:SM00645	SMART:SM00848	SUPFAM:SSF54001	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000009FF2B
RefSeq:XP_015640205.1	SEG:seg	:	:	:	:

Description

Similar to Xylem cysteine proteinase 2 precursor (EC 3.4.22.-) (AtXCP2). (Os05t0108600-01)

Coordinates

chr5:+:486058..488356

Molecular Weight (calculated)

39038.7 Da

IEP (calculated)

4.958

GRAVY (calculated)

-0.401

Length

358 amino acids

Sequence
(BLAST)

001: METKVTVGVV LLLLCLCGGA ACAAGRSGGE FSIVGYSEED LASHDRLIEL FEKWVAKYRK AYASFEEKVR RFEVFKDNLN HIDDINKKVT SYWLGLNEFA
101: DLTHDEFKAT YLGLTPPPTR SNSKHYSSEE FRYGKMSNGE VPKEMDWRKK NAVTEVKNQG QCGSCWAFST VAAVEGINAI VTGNLTSLSE QELIDCSTDG
201: NNGCNGGLMD YAFSYIASTG GLRTEEAYPY AMEEGDCDEG KGAAVVTISG YEDVPANDEQ ALVKALAHQP VSVAIEASGR HFQFYSGGVF DGPCGEQLDH
301: GVTAVGYGTS KGQDYIIVKN SWGPHWGEKG YIRMKRGTGK GEGLCGINKM ASYPTKDN

Best Arabidopsis Sequence Match ( AT1G20850.1 )
(BLAST)

001: MALSSPSRIL CFALALSAAS LSLSFASSHD YSIVGYSPED LESHDKLIEL FENWISNFEK AYETVEEKFL RFEVFKDNLK HIDETNKKGK SYWLGLNEFA
101: DLSHEEFKKM YLGLKTDIVR RDEERSYAEF AYRDVEAVPK SVDWRKKGAV AEVKNQGSCG SCWAFSTVAA VEGINKIVTG NLTTLSEQEL IDCDTTYNNG
201: CNGGLMDYAF EYIVKNGGLR KEEDYPYSME EGTCEMQKDE SETVTINGHQ DVPTNDEKSL LKALAHQPLS VAIDASGREF QFYSGGVFDG RCGVDLDHGV
301: AAVGYGSSKG SDYIIVKNSW GPKWGEKGYI RLKRNTGKPE GLCGINKMAS FPTKTK

Arabidopsis Description

XCP2Cysteine protease XCP2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LM66]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.