Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- endoplasmic reticulum 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G138300.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 93.1 | 98.6 |
| TraesCS5D01G152400.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 92.84 | 98.31 |
| TraesCS1A01G027300.1 | Wheat | endoplasmic reticulum | 84.88 | 91.17 |
| Os05t0108600-01 | Rice | extracellular | 72.41 | 76.26 |
| KXG21060 | Sorghum | endoplasmic reticulum, golgi, vacuole | 70.03 | 71.16 |
| GSMUA_Achr2P04950_001 | Banana | endoplasmic reticulum, golgi | 65.78 | 71.06 |
| Zm00001d035689_P001 | Maize | extracellular | 69.23 | 69.23 |
| Solyc04g082710.2.1 | Tomato | cytosol | 55.7 | 68.85 |
| VIT_18s0122g00790.t01 | Wine grape | nucleus | 61.27 | 68.75 |
| VIT_03s0038g04000.t01 | Wine grape | vacuole | 63.93 | 68.47 |
| Solyc12g094700.1.1 | Tomato | extracellular | 59.95 | 68.28 |
| KRH60879 | Soybean | endoplasmic reticulum | 62.6 | 67.62 |
| AT4G35350.1 | Thale cress | endoplasmic reticulum | 63.66 | 67.61 |
| Bra016447.1-P | Field mustard | endoplasmic reticulum, golgi, vacuole | 64.19 | 67.6 |
| KRH60878 | Soybean | endoplasmic reticulum | 62.07 | 67.05 |
| CDY01351 | Canola | endoplasmic reticulum | 62.33 | 66.95 |
| KRH51560 | Soybean | endoplasmic reticulum | 62.07 | 66.86 |
| CDY31861 | Canola | endoplasmic reticulum | 62.6 | 66.86 |
| GSMUA_Achr3P03740_001 | Banana | endoplasmic reticulum | 62.33 | 66.57 |
| Bra012252.1-P | Field mustard | endoplasmic reticulum | 62.07 | 66.48 |
| CDX75496 | Canola | endoplasmic reticulum | 62.6 | 66.29 |
| Bra011608.1-P | Field mustard | endoplasmic reticulum | 62.6 | 66.29 |
| PGSC0003DMT400075600 | Potato | vacuole | 61.27 | 66.19 |
| CDX96617 | Canola | endoplasmic reticulum | 57.29 | 66.06 |
| KRH51561 | Soybean | endoplasmic reticulum | 61.27 | 66.0 |
| CDY33651 | Canola | endoplasmic reticulum | 57.03 | 65.95 |
| AT1G20850.1 | Thale cress | endoplasmic reticulum | 62.07 | 65.73 |
| PGSC0003DMT400025691 | Potato | endoplasmic reticulum, extracellular | 61.01 | 64.61 |
| CDX69132 | Canola | plastid | 62.86 | 62.37 |
| GSMUA_Achr3P11680_001 | Banana | endoplasmic reticulum, vacuole | 61.01 | 58.82 |
| CDY31498 | Canola | cytosol | 44.03 | 55.52 |
| TraesCS6A01G279500.1 | Wheat | endoplasmic reticulum, extracellular | 52.79 | 55.28 |
| TraesCS2A01G054500.1 | Wheat | cytosol, nucleus, plastid | 13.26 | 52.63 |
| TraesCS2A01G054600.1 | Wheat | cytosol, nucleus, plastid | 13.26 | 52.63 |
| TraesCS2A01G054800.1 | Wheat | cytosol, mitochondrion, nucleus | 20.42 | 52.03 |
| TraesCS4A01G273900.1 | Wheat | cytosol, nucleus, plastid | 13.0 | 51.58 |
| TraesCS3A01G346900.1 | Wheat | endoplasmic reticulum | 48.54 | 50.27 |
| TraesCS3A01G348500.1 | Wheat | endoplasmic reticulum | 48.54 | 50.27 |
| TraesCS4A01G238600.1 | Wheat | nucleus | 48.01 | 49.73 |
| TraesCS6A01G346400.1 | Wheat | cytosol | 12.47 | 49.47 |
| TraesCS6A01G154300.1 | Wheat | extracellular | 43.77 | 48.25 |
| TraesCS4A01G274000.1 | Wheat | extracellular | 43.5 | 48.09 |
| TraesCS4A01G274100.1 | Wheat | extracellular | 42.71 | 47.92 |
| TraesCS4A01G273800.1 | Wheat | extracellular | 42.97 | 47.51 |
| TraesCS5A01G391500.1 | Wheat | endoplasmic reticulum, extracellular | 42.97 | 46.82 |
| TraesCS3A01G413000.1 | Wheat | endoplasmic reticulum | 45.62 | 46.61 |
| TraesCS3A01G412900.1 | Wheat | endoplasmic reticulum | 46.42 | 46.42 |
| TraesCS3A01G413200.1 | Wheat | endoplasmic reticulum | 45.89 | 46.13 |
| TraesCS6A01G345600.1 | Wheat | cytosol, mitochondrion, nucleus | 18.04 | 45.95 |
| TraesCS6A01G346500.1 | Wheat | extracellular | 34.22 | 45.91 |
| TraesCS6A01G346800.1 | Wheat | extracellular | 41.11 | 45.72 |
| TraesCS1A01G223500.1 | Wheat | extracellular | 41.11 | 45.72 |
| TraesCS6A01G345900.1 | Wheat | extracellular | 40.85 | 45.43 |
| TraesCS6A01G346600.1 | Wheat | extracellular | 40.85 | 45.43 |
| TraesCS2A01G056000.1 | Wheat | endoplasmic reticulum, extracellular | 40.32 | 45.37 |
| TraesCS2A01G054700.1 | Wheat | cytosol, mitochondrion, nucleus | 12.73 | 44.86 |
| TraesCS4A01G273700.1 | Wheat | extracellular | 33.42 | 41.58 |
| TraesCS2A01G512100.1 | Wheat | extracellular | 48.01 | 39.26 |
| TraesCS2A01G546700.1 | Wheat | endoplasmic reticulum | 47.21 | 38.03 |
| TraesCS2A01G546300.1 | Wheat | endoplasmic reticulum, vacuole | 47.21 | 37.95 |
| TraesCS7A01G264200.1 | Wheat | endoplasmic reticulum | 47.48 | 37.76 |
| TraesCS2A01G545700.1 | Wheat | unclear | 47.21 | 37.71 |
| TraesCS1A01G325400.1 | Wheat | extracellular | 41.64 | 34.66 |
Protein Annotations
| MapMan:19.4.1.1 | MapMan:27.2.10 | Gene3D:3.90.70.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006508 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008234 | GO:GO:0016787 | GO:GO:0019538 | PFAM:PF00112 |
| PFAM:PF08246 | PRINTS:PR00705 | ScanProsite:PS00139 | ScanProsite:PS00639 | ScanProsite:PS00640 | PANTHER:PTHR12411 |
| PANTHER:PTHR12411:SF427 | InterPro:Papain_like_cys_pep_sf | InterPro:Pept_asp_AS | InterPro:Pept_cys_AS | InterPro:Pept_his_AS | InterPro:Peptidase_C1A |
| InterPro:Peptidase_C1A_C | InterPro:Prot_inhib_I29 | SMART:SM00645 | SMART:SM00848 | SUPFAM:SSF54001 | EnsemblPlantsGene:TraesCS5A01G138700 |
| EnsemblPlants:TraesCS5A01G138700.1 | TIGR:cd02248 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr5A:+:311000953..311002310
Molecular Weight (calculated)
40906.1 Da
IEP (calculated)
6.134
GRAVY (calculated)
-0.302
Length
377 amino acids
Sequence
(BLAST)
(BLAST)
001: MHPILHPATN QPPTLPFQAS TMASPRHLMK LSAALLLLCV GVCVARNSDF SIVGYSEEDL SSNDRLVELF EKWLAKHQKA YASFEEKLHK FEVFKDNLKH
101: IDKINREVTS YWLGLNEFAD LTNVEFKAAY LGLNAAPARR GSSRSFRYED VSASDLPKSV DWRKKGAVTE VKNQGQCGSC WAFSTVAAVE GINAIVTGNL
201: TALSEQELID CSVDGNSGCN GGLMDYAFSY IASSGGLHTE EAYPYLMEEG SCGDGKKAES KAVTISGFED VPANDEQALI KALAHQPVSV AIEASGRHFQ
301: FYSGGVFDGP CGAQLDHGVA AVGYGSDKGK GHDYIIVRNS WGADWGEKGY IRMKRGTSNG EGLCGINKMA SYPTKDK
101: IDKINREVTS YWLGLNEFAD LTNVEFKAAY LGLNAAPARR GSSRSFRYED VSASDLPKSV DWRKKGAVTE VKNQGQCGSC WAFSTVAAVE GINAIVTGNL
201: TALSEQELID CSVDGNSGCN GGLMDYAFSY IASSGGLHTE EAYPYLMEEG SCGDGKKAES KAVTISGFED VPANDEQALI KALAHQPVSV AIEASGRHFQ
301: FYSGGVFDGP CGAQLDHGVA AVGYGSDKGK GHDYIIVRNS WGADWGEKGY IRMKRGTSNG EGLCGINKMA SYPTKDK
001: MAFSAPSLSK FSLLVAISAS ALLCCAFARD FSIVGYTPEH LTNTDKLLEL FESWMSEHSK AYKSVEEKVH RFEVFRENLM HIDQRNNEIN SYWLGLNEFA
101: DLTHEEFKGR YLGLAKPQFS RKRQPSANFR YRDITDLPKS VDWRKKGAVA PVKDQGQCGS CWAFSTVAAV EGINQITTGN LSSLSEQELI DCDTTFNSGC
201: NGGLMDYAFQ YIISTGGLHK EDDYPYLMEE GICQEQKEDV ERVTISGYED VPENDDESLV KALAHQPVSV AIEASGRDFQ FYKGGVFNGK CGTDLDHGVA
301: AVGYGSSKGS DYVIVKNSWG PRWGEKGFIR MKRNTGKPEG LCGINKMASY PTKTK
101: DLTHEEFKGR YLGLAKPQFS RKRQPSANFR YRDITDLPKS VDWRKKGAVA PVKDQGQCGS CWAFSTVAAV EGINQITTGN LSSLSEQELI DCDTTFNSGC
201: NGGLMDYAFQ YIISTGGLHK EDDYPYLMEE GICQEQKEDV ERVTISGYED VPENDDESLV KALAHQPVSV AIEASGRDFQ FYKGGVFNGK CGTDLDHGVA
301: AVGYGSSKGS DYVIVKNSWG PRWGEKGFIR MKRNTGKPEG LCGINKMASY PTKTK
Arabidopsis Description
XCP1Cysteine protease XCP1 [Source:UniProtKB/Swiss-Prot;Acc:O65493]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.