Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- vacuole 2
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Solyc02g087300.1.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G20850.1 | Solyc02g087300.1.1 | AT3G01340.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400025691 | Potato | endoplasmic reticulum, extracellular | 96.72 | 82.87 |
| Solyc12g094700.1.1 | Tomato | extracellular | 84.26 | 77.64 |
| KRH60879 | Soybean | endoplasmic reticulum | 79.67 | 69.63 |
| KRH60878 | Soybean | endoplasmic reticulum | 79.02 | 69.05 |
| KRH51560 | Soybean | endoplasmic reticulum | 78.69 | 68.57 |
| KRH51561 | Soybean | endoplasmic reticulum | 78.03 | 68.0 |
| VIT_03s0038g04000.t01 | Wine grape | vacuole | 76.07 | 65.91 |
| CDY01351 | Canola | endoplasmic reticulum | 74.43 | 64.67 |
| CDY31861 | Canola | endoplasmic reticulum | 74.43 | 64.31 |
| AT1G20850.1 | Thale cress | endoplasmic reticulum | 74.75 | 64.04 |
| Bra016447.1-P | Field mustard | endoplasmic reticulum, golgi, vacuole | 75.08 | 63.97 |
| Bra012252.1-P | Field mustard | endoplasmic reticulum | 73.44 | 63.64 |
| CDX96617 | Canola | endoplasmic reticulum | 66.89 | 62.39 |
| CDY33651 | Canola | endoplasmic reticulum | 65.9 | 61.66 |
| TraesCS1D01G026500.1 | Wheat | endoplasmic reticulum | 69.84 | 60.68 |
| TraesCS1B01G033200.1 | Wheat | endoplasmic reticulum, extracellular, golgi | 69.84 | 60.51 |
| TraesCS1A01G027300.1 | Wheat | endoplasmic reticulum | 69.51 | 60.4 |
| GSMUA_Achr3P03740_001 | Banana | endoplasmic reticulum | 69.84 | 60.34 |
| TraesCS5D01G152400.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 69.18 | 59.27 |
| TraesCS5B01G138300.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 68.85 | 58.99 |
| Os05t0108600-01 | Rice | extracellular | 69.18 | 58.94 |
| Os01t0971400-01 | Rice | extracellular | 69.51 | 58.08 |
| KXG21060 | Sorghum | endoplasmic reticulum, golgi, vacuole | 70.16 | 57.68 |
| EES02142 | Sorghum | vacuole | 70.82 | 57.14 |
| Zm00001d011787_P001 | Maize | extracellular | 70.49 | 55.84 |
| TraesCS5A01G138700.1 | Wheat | plastid | 68.85 | 55.7 |
| Zm00001d035689_P001 | Maize | extracellular | 67.54 | 54.64 |
| TraesCS6B01G308300.1 | Wheat | extracellular, vacuole | 61.97 | 52.65 |
| EES07368 | Sorghum | extracellular | 60.98 | 52.25 |
| Os02t0715000-01 | Rice | endoplasmic reticulum | 62.3 | 51.91 |
| TraesCS6A01G279500.1 | Wheat | endoplasmic reticulum, extracellular | 60.33 | 51.11 |
| HORVU6Hr1G070320.2 | Barley | endoplasmic reticulum, extracellular | 60.33 | 50.55 |
| Solyc02g076970.1.1 | Tomato | extracellular | 46.23 | 50.18 |
| Zm00001d017834_P001 | Maize | extracellular | 51.15 | 50.16 |
| CDY31498 | Canola | cytosol | 48.85 | 49.83 |
| TraesCS6D01G259900.1 | Wheat | plastid | 60.66 | 48.94 |
| Solyc12g056020.1.1 | Tomato | extracellular | 53.77 | 48.09 |
| Solyc02g093040.2.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 56.39 | 47.38 |
| Solyc12g056000.1.1 | Tomato | endoplasmic reticulum | 52.79 | 47.35 |
| Solyc12g056010.1.1 | Tomato | endoplasmic reticulum | 52.79 | 47.35 |
| HORVU1Hr1G003940.6 | Barley | endoplasmic reticulum | 57.05 | 47.15 |
| Solyc03g006200.1.1 | Tomato | endoplasmic reticulum, extracellular | 46.23 | 46.38 |
| Solyc03g111730.2.1 | Tomato | endoplasmic reticulum | 54.43 | 46.11 |
| Solyc03g044230.1.1 | Tomato | extracellular | 56.39 | 45.38 |
| Solyc05g013920.2.1 | Tomato | endoplasmic reticulum | 51.15 | 43.58 |
| Solyc02g076910.2.1 | Tomato | extracellular, golgi | 49.51 | 43.02 |
| Solyc02g076980.2.1 | Tomato | endoplasmic reticulum, golgi | 46.23 | 40.87 |
| Solyc02g077040.2.1 | Tomato | extracellular | 44.59 | 39.42 |
| Solyc01g107760.2.1 | Tomato | extracellular | 60.0 | 38.94 |
| Solyc03g006210.1.1 | Tomato | extracellular | 42.95 | 37.86 |
| Solyc04g078540.2.1 | Tomato | endoplasmic reticulum | 56.39 | 36.44 |
| Solyc12g088670.1.1 | Tomato | endoplasmic reticulum | 52.46 | 34.33 |
| Solyc04g080880.2.1 | Tomato | extracellular | 51.8 | 18.7 |
Protein Annotations
| MapMan:19.4.1.1 | MapMan:27.2.10 | Gene3D:3.90.70.10 | MEROPS:C01.065 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004197 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005615 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005764 | GO:GO:0005773 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008233 | GO:GO:0008234 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 |
| GO:GO:0051603 | UniProt:K4BVZ8 | PFAM:PF00112 | PFAM:PF08246 | PRINTS:PR00705 | ScanProsite:PS00139 |
| ScanProsite:PS00640 | PANTHER:PTHR12411 | PANTHER:PTHR12411:SF357 | InterPro:Papain_like_cys_pep_sf | InterPro:Pept_asp_AS | InterPro:Pept_cys_AS |
| InterPro:Peptidase_C1A | InterPro:Peptidase_C1A_C | InterPro:Prot_inhib_I29 | SMART:SM00645 | SMART:SM00848 | SUPFAM:SSF54001 |
| EnsemblPlantsGene:Solyc04g082710.2 | EnsemblPlants:Solyc04g082710.2.1 | UniParc:UPI0002766879 | : | : | : |
Description
No Description!
Coordinates
chr4:+:66298255..66299698
Molecular Weight (calculated)
34372.4 Da
IEP (calculated)
5.275
GRAVY (calculated)
-0.598
Length
305 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKHGKIYKS IEEKLHRFEI FKENLKHIDE RNKMVTNYWL GLNEFSDLSH DEFKEMYLGL KVDQELLNKR EKLSQEEFAY RDFVDLPKSV DWRKKGAVTP
101: VKNQGQCGSC WAFSTVAAVE GINQIKTGNL TSLSEQELID CDTTYNNGCN GGLMDYAFQF IVSNGGLHKE DDYPYLMEEG TCDEKRDESE VVTIDGYHDV
201: PANDEQSLLK ALANQPLSVA IEASTRDFQF YSGGVFDGHC GTDLDHGVSA VGYGSTKGGA DYIIVKNSWG PKWGEKGFIR IKRNTAKPQG LCGINKMVSF
301: PLKNK
101: VKNQGQCGSC WAFSTVAAVE GINQIKTGNL TSLSEQELID CDTTYNNGCN GGLMDYAFQF IVSNGGLHKE DDYPYLMEEG TCDEKRDESE VVTIDGYHDV
201: PANDEQSLLK ALANQPLSVA IEASTRDFQF YSGGVFDGHC GTDLDHGVSA VGYGSTKGGA DYIIVKNSWG PKWGEKGFIR IKRNTAKPQG LCGINKMVSF
301: PLKNK
001: MAFSAPSLSK FSLLVAISAS ALLCCAFARD FSIVGYTPEH LTNTDKLLEL FESWMSEHSK AYKSVEEKVH RFEVFRENLM HIDQRNNEIN SYWLGLNEFA
101: DLTHEEFKGR YLGLAKPQFS RKRQPSANFR YRDITDLPKS VDWRKKGAVA PVKDQGQCGS CWAFSTVAAV EGINQITTGN LSSLSEQELI DCDTTFNSGC
201: NGGLMDYAFQ YIISTGGLHK EDDYPYLMEE GICQEQKEDV ERVTISGYED VPENDDESLV KALAHQPVSV AIEASGRDFQ FYKGGVFNGK CGTDLDHGVA
301: AVGYGSSKGS DYVIVKNSWG PRWGEKGFIR MKRNTGKPEG LCGINKMASY PTKTK
101: DLTHEEFKGR YLGLAKPQFS RKRQPSANFR YRDITDLPKS VDWRKKGAVA PVKDQGQCGS CWAFSTVAAV EGINQITTGN LSSLSEQELI DCDTTFNSGC
201: NGGLMDYAFQ YIISTGGLHK EDDYPYLMEE GICQEQKEDV ERVTISGYED VPENDDESLV KALAHQPVSV AIEASGRDFQ FYKGGVFNGK CGTDLDHGVA
301: AVGYGSSKGS DYVIVKNSWG PRWGEKGFIR MKRNTGKPEG LCGINKMASY PTKTK
Arabidopsis Description
XCP1Cysteine protease XCP1 [Source:UniProtKB/Swiss-Prot;Acc:O65493]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.