Factsheet for Solyc02g077040.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 8
plasma membrane 5
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

extracellular: 26583031
extracellular: 29876421

msms PMID: 26583031 doi

F Gawehns, L Ma, O Bruning, PM Houterman, S Boeren, BJ Cornelissen, M Rep, FL Takken

Laboratory of Biochemistry, Wageningen University Wageningen, Netherlands., Molecular Plant Pathology, Faculty of Science, Swammerdam Institute for Life Sciences, University of Amsterdam Amsterdam, Netherlands., RNA Biology and Applied Bioinformatics Research Group and MAD: Dutch Genomics Service and Support Provider, Faculty of Science, Swammerdam Institute for Life Sciences, University of Amsterdam Amsterdam, Netherlands.

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400026493	Potato	extracellular, golgi, vacuole	90.43	90.7
Solyc03g006210.1.1	Tomato	extracellular	56.23	56.07
Solyc02g076970.1.1	Tomato	extracellular	43.77	53.74
Solyc12g056010.1.1	Tomato	endoplasmic reticulum	51.88	52.65
Solyc12g056020.1.1	Tomato	extracellular	51.01	51.61
Solyc12g056000.1.1	Tomato	endoplasmic reticulum	50.72	51.47
Solyc03g006200.1.1	Tomato	endoplasmic reticulum, extracellular	44.06	50.0
Solyc02g076980.2.1	Tomato	endoplasmic reticulum, golgi	48.7	48.7
Solyc02g076910.2.1	Tomato	extracellular, golgi	47.83	47.01
Solyc04g082710.2.1	Tomato	cytosol	39.42	44.59
KRH50168	Soybean	nucleus	42.61	43.24
GSMUA_Achr6P13620_001	Banana	extracellular, vacuole	41.45	43.07
Solyc03g111730.2.1	Tomato	endoplasmic reticulum	44.06	42.22
Solyc12g094700.1.1	Tomato	extracellular	40.0	41.69
Solyc05g013920.2.1	Tomato	endoplasmic reticulum	42.03	40.5
Solyc03g044230.1.1	Tomato	extracellular	41.45	37.73
Solyc02g093040.2.1	Tomato	endoplasmic reticulum, extracellular, vacuole	39.42	37.47
Solyc01g107760.2.1	Tomato	extracellular	42.32	31.06
Solyc12g088670.1.1	Tomato	endoplasmic reticulum	41.74	30.9
Solyc04g078540.2.1	Tomato	endoplasmic reticulum	41.45	30.3
Solyc04g080880.2.1	Tomato	extracellular	41.16	16.8

Protein Annotations

Gene3D:3.90.70.10	MapMan:50.3.4	MEROPS:C01.140	GO:GO:0003674	GO:GO:0003824	GO:GO:0004197
GO:GO:0005575	GO:GO:0005576	GO:GO:0005615	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005764	GO:GO:0005773	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233
GO:GO:0008234	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0019538	GO:GO:0051603	UniProt:K4B8T1	PFAM:PF00112	PFAM:PF08246	PRINTS:PR00705
ScanProsite:PS00139	ScanProsite:PS00639	ScanProsite:PS00640	PANTHER:PTHR12411	PANTHER:PTHR12411:SF418	InterPro:Papain_like_cys_pep_sf
InterPro:Pept_asp_AS	InterPro:Pept_cys_AS	InterPro:Pept_his_AS	InterPro:Peptidase_C1A	InterPro:Peptidase_C1A_C	InterPro:Prot_inhib_I29
SMART:SM00645	SMART:SM00848	SUPFAM:SSF54001	EnsemblPlantsGene:Solyc02g077040.2	EnsemblPlants:Solyc02g077040.2.1	TMHMM:TMhelix
UniParc:UPI0002767952	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2:+:42112777..42114420

Molecular Weight (calculated)

38253.8 Da

IEP (calculated)

4.672

GRAVY (calculated)

-0.284

Length

345 amino acids

Sequence
(BLAST)

001: MASNFFLKNI TVVLLLFSIL SLYPFIVTSR NLKELSMLER HENWMVHHGR VYKDDIEKEH RFKTFKENVE FIESFNKNGT QRYKLAINKY ADLTTEEFTT
101: SFMGLDTSLL SQQESTATTT SFKYDSVTEV PNSMDWRKRG SVTGVKDQGV CGCCWAFSAA AAIEGAYQIA NNELISLSEQ QLLDCSTQNK GCEGGLMTVA
201: YDFLLQNNGG GITTETNYPY EEAQNVCKTE QPAAVTINGY EVVPSDESSL LKAVVNQPIS VGIAANDEFH MYGSGIYDGS CNSRLNHAVT VIGYGTSEED
301: GTKYWIVKNS WGSDWGEEGY MRIARDVGVD GGHCGIAKVA SFPTV

Best Arabidopsis Sequence Match ( AT3G49340.1 )
(BLAST)

001: MTSIVFFLLA ILLSSRTSGV TSRGGLFEAS AVEKHEQWMS RFNRVYSDDS EKTSRFEIFT NNLKFVESIN MNTNKTYTLD VNEFSDLTDE EFKARYTGLV
101: VPEGMTRIST TDSHETVSFR YENVGETGES MDWIQEGAVT SVKHQQQCGC CWAFSAVAAV EGMTKIANGE LVSLSEQQLL DCSTENNGCG GGIMWKAFDY
201: IKENQGITTE DNYPYQGAQQ TCESNHLAAA TISGYETVPQ NDEEALLKAV SQQPVSVAIE GSGYEFIHYS GGIFNGECGT QLTHAVTIVG YGVSEEGIKY
301: WLLKNSWGES WGENGYMRIM RDVDSPQGMC GLASLAYYPV A

Arabidopsis Description

Cysteine protease-like protein [Source:UniProtKB/TrEMBL;Acc:Q9SG15]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.