CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 4
golgi 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH55771	Soybean	cytosol, nucleus	39.41	47.86
KRH25039	Soybean	extracellular, golgi, vacuole	43.53	47.28
KRH29892	Soybean	extracellular, golgi, vacuole	47.35	46.94
KRH55752	Soybean	endoplasmic reticulum	46.47	46.06
KRH55761	Soybean	extracellular	46.18	45.77
KRH25766	Soybean	extracellular	46.18	45.77
KRH25728	Soybean	extracellular	46.18	45.77
KRH55762	Soybean	endoplasmic reticulum	45.88	45.48
KRH55750	Soybean	extracellular	45.88	45.48
KRH25765	Soybean	endoplasmic reticulum, golgi	45.59	45.19
KRH25038	Soybean	extracellular	45.59	45.19
KRG88601	Soybean	endoplasmic reticulum, golgi	45.29	44.9
KRH25729	Soybean	endoplasmic reticulum, golgi	45.0	44.61
KRH55801	Soybean	golgi, vacuole	45.0	44.61
KRG88605	Soybean	endoplasmic reticulum, golgi	45.0	44.61
KRH55800	Soybean	endoplasmic reticulum, golgi	45.0	44.61
PGSC0003DMT400026491	Potato	nucleus	39.41	44.37
PGSC0003DMT400026493	Potato	extracellular, golgi, vacuole	44.71	44.19
PGSC0003DMT400011188	Potato	endoplasmic reticulum	44.41	43.39
KRH54277	Soybean	endoplasmic reticulum	45.88	43.09
PGSC0003DMT400026464	Potato	endoplasmic reticulum, extracellular	43.53	43.02
KRH55769	Soybean	extracellular, vacuole	44.12	42.61
Solyc02g077040.2.1	Tomato	extracellular	43.24	42.61
KRH63669	Soybean	endoplasmic reticulum	45.29	42.54
Solyc03g006210.1.1	Tomato	extracellular	43.24	42.49
KRH60878	Soybean	endoplasmic reticulum	43.53	42.41
KRH60879	Soybean	endoplasmic reticulum	43.53	42.41
Solyc02g076980.2.1	Tomato	endoplasmic reticulum, golgi	42.94	42.32
KRH51561	Soybean	endoplasmic reticulum	43.24	42.0
KRH51560	Soybean	endoplasmic reticulum	42.94	41.71
KRH13244	Soybean	extracellular	40.59	41.57
GSMUA_Achr6P13620_001	Banana	extracellular, vacuole	40.29	41.27
KRH04538	Soybean	extracellular	44.41	41.26
KRH57968	Soybean	endoplasmic reticulum	43.53	40.44
KRH07581	Soybean	endoplasmic reticulum	43.53	40.44
KRH03891	Soybean	endoplasmic reticulum	44.71	40.11
KRH61341	Soybean	endoplasmic reticulum, extracellular, vacuole	42.06	38.96
KRH05634	Soybean	endoplasmic reticulum	43.82	31.3
KRH61098	Soybean	endoplasmic reticulum, extracellular, plasma membrane	40.29	31.21
KRH15406	Soybean	nucleus	43.53	29.84

Protein Annotations

EntrezGene:100803704	Gene3D:3.90.70.10	MapMan:50.3.4	EMBL:ACUP02004666	EnsemblPlantsGene:GLYMA_07G205400	GO:GO:0003674
GO:GO:0003824	GO:GO:0004197	GO:GO:0005575	GO:GO:0005576	GO:GO:0005615	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005764	GO:GO:0005773	GO:GO:0006508	GO:GO:0008150
GO:GO:0008152	GO:GO:0008233	GO:GO:0008234	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0051603	UniProt:I1KLT2	EnsemblPlants:KRH50168	ProteinID:KRH50168	ProteinID:KRH50168.1
PFAM:PF00112	PFAM:PF08246	PRINTS:PR00705	ScanProsite:PS00139	ScanProsite:PS00639	ScanProsite:PS00640
PANTHER:PTHR12411	PANTHER:PTHR12411:SF545	InterPro:Papain_like_cys_pep_sf	InterPro:Pept_asp_AS	InterPro:Pept_cys_AS	InterPro:Pept_his_AS
InterPro:Peptidase_C1A	InterPro:Peptidase_C1A_C	InterPro:Prot_inhib_I29	SMART:SM00645	SMART:SM00848	SUPFAM:SSF54001
SignalP:SignalP-noTM	UniParc:UPI00023381FC	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:37460826..37462747

Molecular Weight (calculated)

37728.3 Da

IEP (calculated)

5.421

GRAVY (calculated)

-0.421

Length

340 amino acids

Sequence
(BLAST)

001: MALTLDKKSV GTFFMLFLTC ICRASSRTLS ESSIATQHEE WMAMHDRVYA DSAEKDRRQQ IFKENLEFIE KHNNEGKKRY NLSLNSFADL TNEEFVASHT
101: GALYKPPTQL GSFKINHSLG FHKMSVGDIE ASLDWRKRGA VNDIKNQGRC GSCWAFSAVA AVEGINQIKN GQLVSLSEQN LVDCASNDGC HGQYVEKAFD
201: YIRDYGLANE EEYPYVETVG TCSGNSNPAI QIRGYQSVTP QNEEQLLTAV ASQPVSVLLE AKGQGFQFYS GGVFSGECGT ELNHAVTIVG YGEEAEGKYW
301: LIRNSWGKSW GEGGYMKLMR DTGNPQGLCG INMQASYPFL

Best Arabidopsis Sequence Match ( AT1G29090.1 )
(BLAST)

001: MCDSFINNKM TSILFMLVSL TILSMNLKVS QATSRVTFHE PIVAEHHQQW MTRFSRVYSD ELEKQMRFDV FKKNLKFIEK FNKKGDRTYK LGVNEFADWT
101: REEFIATHTG LKGVNGIPSS EFVDEMIPSW NWNVSDVAGR ETKDWRYEGA VTPVKYQGQC GCCWAFSSVA AVEGLTKIVG NNLVSLSEQQ LLDCDRERDN
201: GCNGGIMSDA FSYIIKNRGI ASEASYPYQA AEGTCRYNGK PSAWIRGFQT VPSNNERALL EAVSKQPVSV SIDADGPGFM HYSGGVYDEP YCGTNVNHAV
301: TFVGYGTSPE GIKYWLAKNS WGETWGENGY IRIRRDVAWP QGMCGVAQYA FYPVA

Arabidopsis Description

Cysteine proteinases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q84W75]
SUBAcon: [endoplasmic reticulum,plastid,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.