Skip to main content
crop-pal logo
Soybean
Search for another protein from :
Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • plastid 5
  • vacuole 3
  • nucleus 2
  • extracellular 1
  • endoplasmic reticulum 2
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:nucleus, plastid, secretory
BaCelLo:plastid
ChloroP:plastid
EpiLoc:vacuole
iPSORT:plastid
MultiLoc:nucleus
Plant-mPloc:vacuole
Predotar:plastid
PProwler:secretory
TargetP:plastid
WoLF PSORT:nucleus
YLoc:endoplasmic reticulum
 nucleus: 21132161
endoplasmic reticulum: 27224218
nucleus: 27291164
endoplasmic reticulum: 28499913
nucleus: 28499913
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27291164 doi
X Yin, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH05634 Soybean endoplasmic reticulum 91.13 94.96
VIT_18s0001g09990.t01 Wine grape endoplasmic reticulum 68.75 73.02
CDY63586 Canola endoplasmic reticulum 65.73 71.02
CDY17044 Canola endoplasmic reticulum 65.32 70.59
Bra014057.1-P Field mustard endoplasmic reticulum 64.72 69.93
CDY17093 Canola endoplasmic reticulum 64.31 69.8
KRH61341 Soybean endoplasmic reticulum, extracellular, vacuole 51.41 69.48
CDX71540 Canola extracellular 64.11 69.13
Bra040749.1-P Field mustard endoplasmic reticulum 63.51 68.93
Bra033657.1-P Field mustard extracellular 63.91 68.91
CDY22370 Canola extracellular 63.91 68.91
CDY06760 Canola endoplasmic reticulum 63.31 68.71
AT1G47128.1 Thale cress endoplasmic reticulum 63.91 68.61
CDY25228 Canola extracellular 62.5 67.39
AT5G43060.1 Thale cress endoplasmic reticulum 62.9 67.39
KXG27269 Sorghum endoplasmic reticulum 62.9 67.24
GSMUA_Achr1P15920_001 Banana endoplasmic reticulum 63.71 67.23
GSMUA_Achr3P01000_001 Banana endoplasmic reticulum 63.51 67.16
GSMUA_Achr4P06140_001 Banana endoplasmic reticulum 63.31 66.95
Zm00001d002065_P006 Maize plasma membrane 63.1 66.88
TraesCS2B01G540100.2 Wheat golgi 61.69 66.09
TraesCS2A01G512100.1 Wheat extracellular 61.29 65.94
GSMUA_Achr10P... Banana endoplasmic reticulum 62.3 65.88
TraesCS2D01G513600.1 Wheat endoplasmic reticulum, golgi, vacuole 61.49 65.87
PGSC0003DMT400020654 Potato cytosol 58.67 65.69
Solyc12g088670.1.1 Tomato endoplasmic reticulum 61.69 65.67
KRH57968 Soybean endoplasmic reticulum 48.19 65.3
CDY17193 Canola endoplasmic reticulum 41.73 65.09
KRH04538 Soybean extracellular 47.78 64.75
GSMUA_Achr4P12910_001 Banana endoplasmic reticulum 61.69 64.69
Zm00001d026458_P002 Maize endoplasmic reticulum 62.5 64.58
KRH07581 Soybean endoplasmic reticulum 47.58 64.48
Solyc04g078540.2.1 Tomato endoplasmic reticulum 60.28 63.35
HORVU2Hr1G113460.2 Barley plasma membrane 62.1 62.99
GSMUA_Achr8P03350_001 Banana endoplasmic reticulum, extracellular, vacuole 41.73 62.16
GSMUA_Achr1P09800_001 Banana endoplasmic reticulum 57.46 60.25
CDY27951 Canola endoplasmic reticulum 53.63 57.95
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, golgi 38.71 55.98
KRH60879 Soybean endoplasmic reticulum 37.9 53.87
KRH55771 Soybean cytosol, nucleus 30.04 53.21
KRH51561 Soybean endoplasmic reticulum 37.5 53.14
KRH60878 Soybean endoplasmic reticulum 37.1 52.72
KRH51560 Soybean endoplasmic reticulum 37.1 52.57
KRH29892 Soybean extracellular, golgi, vacuole 35.89 51.9
KRH25039 Soybean extracellular, golgi, vacuole 32.66 51.76
KRG88605 Soybean endoplasmic reticulum, golgi 35.28 51.02
KRH25729 Soybean endoplasmic reticulum, golgi 35.28 51.02
KRG88601 Soybean endoplasmic reticulum, golgi 35.08 50.73
KRH54277 Soybean endoplasmic reticulum 36.9 50.55
KRH63669 Soybean endoplasmic reticulum 36.9 50.55
KRH25765 Soybean endoplasmic reticulum, golgi 34.88 50.44
CDY02431 Canola nucleus 45.56 50.33
KRH55752 Soybean endoplasmic reticulum 34.68 50.15
KRH55800 Soybean endoplasmic reticulum, golgi 34.48 49.85
KRH55762 Soybean endoplasmic reticulum 34.27 49.56
KRH25766 Soybean extracellular 34.07 49.27
KRH55801 Soybean golgi, vacuole 33.87 48.98
KRH55761 Soybean extracellular 33.87 48.98
KRH55750 Soybean extracellular 33.87 48.98
KRH25728 Soybean extracellular 33.87 48.98
KRH13244 Soybean extracellular 32.26 48.19
KRH03891 Soybean endoplasmic reticulum 36.29 47.49
KRH61098 Soybean endoplasmic reticulum, extracellular, plasma membrane 41.73 47.15
KRH55769 Soybean extracellular, vacuole 32.86 46.31
KRH25038 Soybean extracellular 31.85 46.06
KRH50168 Soybean nucleus 29.84 43.53
Protein Annotations
EntrezGene:100791699Gene3D:3.10.20.500Gene3D:3.90.70.10MapMan:50.3.4EMBL:ACUP02008590MEROPS:C01.029
EnsemblPlantsGene:GLYMA_14G085800GO:GO:0003674GO:GO:0003824GO:GO:0004197GO:GO:0005575GO:GO:0005576
GO:GO:0005615GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005764GO:GO:0005773
GO:GO:0006508GO:GO:0008150GO:GO:0008152GO:GO:0008233GO:GO:0008234GO:GO:0009056
GO:GO:0009987GO:GO:0016787GO:GO:0019538GO:GO:0051603InterPro:GranulinInterPro:Granulin_sf
UniProt:I1M8Q5InterPro:IPR037277EnsemblPlants:KRH15406ProteinID:KRH15406ProteinID:KRH15406.1PFAM:PF00112
PFAM:PF00396PFAM:PF08246PRINTS:PR00705ScanProsite:PS00139ScanProsite:PS00639ScanProsite:PS00640
PANTHER:PTHR12411PANTHER:PTHR12411:SF352InterPro:Papain_like_cys_pep_sfInterPro:Pept_asp_ASInterPro:Pept_cys_ASInterPro:Pept_his_AS
InterPro:Peptidase_C1AInterPro:Peptidase_C1A_CInterPro:Prot_inhib_I29SMART:SM00277SMART:SM00645SMART:SM00848
SUPFAM:SSF54001SUPFAM:SSF57277UniParc:UPI000233B58DSEG:seg::
Description
hypothetical protein
Coordinates
chr14:+:7617723..7622026
Molecular Weight (calculated)
54401.8 Da
IEP (calculated)
5.878
GRAVY (calculated)
-0.440
Length
496 amino acids
Sequence
(BLAST)
001: MFTAPFPHSL SHLSPKTSPV GSSSSITTTS SKTMTMAMAT ILLLFTVFAV SSALDMSIIS YDNAHAATSR SDEELMSMYE QWLVKHGKVY NALGEKEKRF
101: QIFKDNLRFI DDHNSQEDRT YKLGLNRFAD LTNEEYRAKY LGTKIDPNRR LGKTPSNRYA PRVGDKLPES VDWRKEGAVP PVKDQGGCGS CWAFSAIGAV
201: EGINKIVTGE LISLSEQELV DCDTGYNEGC NGGLMDYAFE FIINNGGIDS EEDYPYRGVD GRCDTYRKNA KVVSIDDYED VPAYDELALK KAVANQPVSV
301: AIEGGGREFQ LYVSGVFTGR CGTALDHGVV AVGYGTANGH DYWIVRNSWG PSWGEDGYIR LERNLANSRS GKCGIAIEPS YPLKNGPNPP NPGPSPPSPV
401: KPPNVCDNYY SCADSATCCC IFEFGNACFE WGCCPLEGAT CCDDHYSCCP NDYPICNTYA GTCLKSKNNP FGVKALRRTP AKPHWTFGRK NKVSSA
Best Arabidopsis Sequence Match ( AT1G47128.1 )
(BLAST)
001: MGFLKPTMAI LFLAMVAVSS AVDMSIISYD EKHGVSTTGG RSEAEVMSIY EAWLVKHGKA QSQNSLVEKD RRFEIFKDNL RFVDEHNEKN LSYRLGLTRF
101: ADLTNDEYRS KYLGAKMEKK GERRTSLRYE ARVGDELPES IDWRKKGAVA EVKDQGGCGS CWAFSTIGAV EGINQIVTGD LITLSEQELV DCDTSYNEGC
201: NGGLMDYAFE FIIKNGGIDT DKDYPYKGVD GTCDQIRKNA KVVTIDSYED VPTYSEESLK KAVAHQPISI AIEAGGRAFQ LYDSGIFDGS CGTQLDHGVV
301: AVGYGTENGK DYWIVRNSWG KSWGESGYLR MARNIASSSG KCGIAIEPSY PIKNGENPPN PGPSPPSPIK PPTQCDSYYT CPESNTCCCL FEYGKYCFAW
401: GCCPLEAATC CDDNYSCCPH EYPVCDLDQG TCLLSKNSPF SVKALKRKPA TPFWSQGRKN IA
Arabidopsis Description
RD21ARD21A [Source:UniProtKB/TrEMBL;Acc:A0A178WIH7]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.