Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 6
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
20408568
plasma membrane: 23353019 plasma membrane: 27341663 |
msms PMID:
23353019
doi
University of Hamburg, Biocenter Klein Flottbek and Botanical Garden, Plant Physiology, Ohnhorststraße 18, D-22609 Hamburg, Germany.
msms PMID:
27341663
doi
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG27269 | Sorghum | endoplasmic reticulum | 91.67 | 92.46 |
| Zm00001d026458_P002 | Maize | endoplasmic reticulum | 92.09 | 89.79 |
| TraesCS2B01G540100.2 | Wheat | golgi | 81.2 | 82.07 |
| TraesCS2D01G513600.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 81.2 | 82.07 |
| TraesCS2A01G512100.1 | Wheat | extracellular | 80.56 | 81.78 |
| HORVU2Hr1G113460.2 | Barley | plasma membrane | 81.62 | 78.12 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 74.57 | 74.41 |
| GSMUA_Achr3P01000_001 | Banana | endoplasmic reticulum | 71.15 | 71.0 |
| VIT_18s0001g09990.t01 | Wine grape | endoplasmic reticulum | 70.73 | 70.88 |
| GSMUA_Achr1P15920_001 | Banana | endoplasmic reticulum | 70.09 | 69.79 |
| GSMUA_Achr8P03350_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 49.36 | 69.37 |
| GSMUA_Achr4P12910_001 | Banana | endoplasmic reticulum | 69.87 | 69.13 |
| GSMUA_Achr4P06140_001 | Banana | endoplasmic reticulum | 69.23 | 69.08 |
| Bra040749.1-P | Field mustard | endoplasmic reticulum | 67.09 | 68.71 |
| CDY63586 | Canola | endoplasmic reticulum | 67.31 | 68.63 |
| CDY06760 | Canola | endoplasmic reticulum | 66.88 | 68.49 |
| CDY17093 | Canola | endoplasmic reticulum | 66.67 | 68.27 |
| CDY17044 | Canola | endoplasmic reticulum | 66.88 | 68.19 |
| Bra014057.1-P | Field mustard | endoplasmic reticulum | 66.88 | 68.19 |
| AT1G47128.1 | Thale cress | endoplasmic reticulum | 66.67 | 67.53 |
| AT5G43060.1 | Thale cress | endoplasmic reticulum | 66.24 | 66.95 |
| CDY22370 | Canola | extracellular | 65.38 | 66.52 |
| CDX71540 | Canola | extracellular | 65.38 | 66.52 |
| Bra033657.1-P | Field mustard | extracellular | 65.17 | 66.3 |
| CDY25228 | Canola | extracellular | 64.53 | 65.65 |
| KRH05634 | Soybean | endoplasmic reticulum | 66.24 | 65.13 |
| KRH15406 | Soybean | nucleus | 66.88 | 63.1 |
| Solyc12g088670.1.1 | Tomato | endoplasmic reticulum | 62.39 | 62.66 |
| PGSC0003DMT400020654 | Potato | cytosol | 58.76 | 62.08 |
| CDY17193 | Canola | endoplasmic reticulum | 42.09 | 61.95 |
| Zm00001d001900_P002 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 61.54 | 61.94 |
| GSMUA_Achr1P09800_001 | Banana | endoplasmic reticulum | 62.39 | 61.73 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, extracellular, golgi | 44.87 | 61.22 |
| Zm00001d026577_P001 | Maize | extracellular, golgi, plasma membrane | 60.9 | 60.64 |
| Solyc04g078540.2.1 | Tomato | endoplasmic reticulum | 61.11 | 60.59 |
| KRH61341 | Soybean | endoplasmic reticulum, extracellular, vacuole | 45.94 | 58.58 |
| Zm00001d037301_P001 | Maize | mitochondrion | 26.28 | 58.02 |
| CDY27951 | Canola | endoplasmic reticulum | 56.62 | 57.73 |
| Zm00001d036541_P002 | Maize | extracellular, plasma membrane | 57.27 | 55.6 |
| Zm00001d045711_P001 | Maize | extracellular | 37.39 | 51.47 |
| Zm00001d045713_P001 | Maize | extracellular | 36.97 | 50.88 |
| Zm00001d036542_P001 | Maize | endoplasmic reticulum, golgi | 43.8 | 50.49 |
| Zm00001d013261_P001 | Maize | extracellular | 36.75 | 50.44 |
| CDY02431 | Canola | nucleus | 48.29 | 50.33 |
| Zm00001d045709_P001 | Maize | extracellular | 33.55 | 50.0 |
| Zm00001d011787_P001 | Maize | extracellular | 41.03 | 49.87 |
| Zm00001d037303_P001 | Maize | extracellular | 36.11 | 49.71 |
| Zm00001d042446_P001 | Maize | extracellular | 38.89 | 49.46 |
| Zm00001d004371_P001 | Maize | extracellular | 36.32 | 48.99 |
| Zm00001d045708_P001 | Maize | extracellular | 34.4 | 48.94 |
| Zm00001d004364_P001 | Maize | nucleus | 32.05 | 48.86 |
| Zm00001d035689_P001 | Maize | extracellular | 38.89 | 48.28 |
| Zm00001d007464_P001 | Maize | endoplasmic reticulum | 39.32 | 47.92 |
| Zm00001d012120_P001 | Maize | endoplasmic reticulum | 38.68 | 47.76 |
| Zm00001d025038_P001 | Maize | endoplasmic reticulum, extracellular | 35.68 | 47.44 |
| Zm00001d008796_P001 | Maize | extracellular | 34.4 | 46.94 |
| Zm00001d004355_P001 | Maize | extracellular | 34.4 | 46.94 |
| Zm00001d038650_P001 | Maize | extracellular | 44.44 | 45.22 |
| Zm00001d031971_P002 | Maize | endoplasmic reticulum | 33.33 | 45.09 |
| Zm00001d017834_P001 | Maize | extracellular | 29.49 | 44.37 |
Protein Annotations
| EntrezGene:100037824 | Gene3D:3.10.20.500 | Gene3D:3.90.70.10 | MapMan:50.3.4 | UniProt:A0A1D6DW35 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 |
| GO:GO:0008234 | GO:GO:0016787 | GO:GO:0019538 | InterPro:Granulin | InterPro:Granulin_sf | InterPro:IPR037277 |
| ProteinID:ONM12923.1 | PFAM:PF00112 | PFAM:PF00396 | PFAM:PF08246 | PRINTS:PR00705 | ScanProsite:PS00139 |
| ScanProsite:PS00639 | ScanProsite:PS00640 | PANTHER:PTHR12411 | PANTHER:PTHR12411:SF352 | InterPro:Papain_like_cys_pep_sf | InterPro:Pept_asp_AS |
| InterPro:Pept_cys_AS | InterPro:Pept_his_AS | InterPro:Peptidase_C1A | InterPro:Peptidase_C1A_C | InterPro:Prot_inhib_I29 | SMART:SM00277 |
| SMART:SM00645 | SMART:SM00848 | SUPFAM:SSF54001 | SUPFAM:SSF57277 | SignalP:SignalP-noTM | TMHMM:TMhelix |
| UniParc:UPI0002219265 | EnsemblPlantsGene:Zm00001d002065 | EnsemblPlants:Zm00001d002065_P006 | EnsemblPlants:Zm00001d002065_T006 | SEG:seg | : |
Description
maize insect resistance3 maize insect resistance3
Coordinates
chr2:+:5233173..5237006
Molecular Weight (calculated)
50504.7 Da
IEP (calculated)
4.855
GRAVY (calculated)
-0.379
Length
468 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAPASTTAA AAAALLLLLL LSLAAAADMS IVSYGERSDE EARRMYAEWM AAHGRTYNAV GEEERRYQVF RDNLRYIDAH NAAADAGVHS FRLGLNRFAD
101: LTNDEYRATY LGARTRPQRE RKLGARYHAA DNEDLPESVD WRAKGAVAEV KDQGSCGSCW AFSTIAAVEG INQIVTGDLI SLSEQELVDC DTSYNQGCNG
201: GLMDYAFEFI INNGGIDTEK DYPYKGTDGR CDVNRKNAKV VTIDSYEDVP ANDEKSLQKA VANQPVSVAI EAAGTAFQLY SSGIFTGSCG TALDHGVTAV
301: GYGTENGKDY WIVKNSWGSS WGESGYVRME RNIKASSGKC GIAVEPSYPL KEGANPPNPG PSPPSPTPAP AVCDNYYSCP DSTTCCCIYE YGKYCFAWGC
401: CPLEGATCCD DHYSCCPHDY PICNVRQGTC LMGKDSPLSL SVKATKRTLA KPHWAFSGNT ADGMKSSA
101: LTNDEYRATY LGARTRPQRE RKLGARYHAA DNEDLPESVD WRAKGAVAEV KDQGSCGSCW AFSTIAAVEG INQIVTGDLI SLSEQELVDC DTSYNQGCNG
201: GLMDYAFEFI INNGGIDTEK DYPYKGTDGR CDVNRKNAKV VTIDSYEDVP ANDEKSLQKA VANQPVSVAI EAAGTAFQLY SSGIFTGSCG TALDHGVTAV
301: GYGTENGKDY WIVKNSWGSS WGESGYVRME RNIKASSGKC GIAVEPSYPL KEGANPPNPG PSPPSPTPAP AVCDNYYSCP DSTTCCCIYE YGKYCFAWGC
401: CPLEGATCCD DHYSCCPHDY PICNVRQGTC LMGKDSPLSL SVKATKRTLA KPHWAFSGNT ADGMKSSA
001: MGFLKPTMAI LFLAMVAVSS AVDMSIISYD EKHGVSTTGG RSEAEVMSIY EAWLVKHGKA QSQNSLVEKD RRFEIFKDNL RFVDEHNEKN LSYRLGLTRF
101: ADLTNDEYRS KYLGAKMEKK GERRTSLRYE ARVGDELPES IDWRKKGAVA EVKDQGGCGS CWAFSTIGAV EGINQIVTGD LITLSEQELV DCDTSYNEGC
201: NGGLMDYAFE FIIKNGGIDT DKDYPYKGVD GTCDQIRKNA KVVTIDSYED VPTYSEESLK KAVAHQPISI AIEAGGRAFQ LYDSGIFDGS CGTQLDHGVV
301: AVGYGTENGK DYWIVRNSWG KSWGESGYLR MARNIASSSG KCGIAIEPSY PIKNGENPPN PGPSPPSPIK PPTQCDSYYT CPESNTCCCL FEYGKYCFAW
401: GCCPLEAATC CDDNYSCCPH EYPVCDLDQG TCLLSKNSPF SVKALKRKPA TPFWSQGRKN IA
101: ADLTNDEYRS KYLGAKMEKK GERRTSLRYE ARVGDELPES IDWRKKGAVA EVKDQGGCGS CWAFSTIGAV EGINQIVTGD LITLSEQELV DCDTSYNEGC
201: NGGLMDYAFE FIIKNGGIDT DKDYPYKGVD GTCDQIRKNA KVVTIDSYED VPTYSEESLK KAVAHQPISI AIEAGGRAFQ LYDSGIFDGS CGTQLDHGVV
301: AVGYGTENGK DYWIVRNSWG KSWGESGYLR MARNIASSSG KCGIAIEPSY PIKNGENPPN PGPSPPSPIK PPTQCDSYYT CPESNTCCCL FEYGKYCFAW
401: GCCPLEAATC CDDNYSCCPH EYPVCDLDQG TCLLSKNSPF SVKALKRKPA TPFWSQGRKN IA
Arabidopsis Description
RD21ARD21A [Source:UniProtKB/TrEMBL;Acc:A0A178WIH7]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.