Factsheet for Zm00001d016017_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d001900_P002
Zm00001d002065_P006
Zm00001d026458_P002
Zm00001d026577_P001
Zm00001d038652_P003

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G21750.1	Zm00001d002065_P006	AT1G47128.1	18676877
AT1G21750.1	Zm00001d026458_P002	AT1G47128.1	18676877
AT1G21750.1	Zm00001d001900_P002	AT3G19390.1	18676877
AT1G21750.1	Zm00001d026577_P001	AT3G19390.1	18676877
AT1G21750.1	Zm00001d001900_P002	AT3G19400.1	18676877
AT1G21750.1	Zm00001d026577_P001	AT3G19400.1	18676877
AT1G21750.1	Zm00001d038652_P003	AT5G42980.1	15352244
AT1G21750.1	Zm00001d002065_P006	AT5G43060.1	18676877
AT1G21750.1	Zm00001d026458_P002	AT5G43060.1	18676877

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028108_P001	Maize	mitochondrion	49.8	90.71
Zm00001d041417_P001	Maize	endoplasmic reticulum	51.76	59.73
HORVU4Hr1G049820.1	Barley	cytosol	27.84	39.01
Zm00001d035557_P001	Maize	mitochondrion	49.8	37.03
HORVU4Hr1G049880.2	Barley	mitochondrion, plastid	38.04	33.11
Zm00001d049099_P005	Maize	endoplasmic reticulum	55.69	26.69
Zm00001d007301_P001	Maize	endoplasmic reticulum	50.59	23.5
Solyc06g060290.2.1	Tomato	plastid	38.43	22.37
GSMUA_Achr1P16970_001	Banana	endoplasmic reticulum	42.35	21.3
PGSC0003DMT400010624	Potato	endoplasmic reticulum	39.61	20.45
Solyc06g005940.2.1	Tomato	nucleus, plastid	39.61	20.24
GSMUA_Achr3P22070_001	Banana	endoplasmic reticulum	40.39	20.04
Bra016405.1-P	Field mustard	endoplasmic reticulum	39.22	19.96
AT1G21750.1	Thale cress	endoplasmic reticulum	38.82	19.76
PGSC0003DMT400045299	Potato	endoplasmic reticulum	38.04	19.52
Bra012293.1-P	Field mustard	endoplasmic reticulum	37.65	19.35
Bra017948.1-P	Field mustard	endoplasmic reticulum	37.65	19.28
Solyc05g056400.2.1	Tomato	plastid	38.82	18.71
Bra015665.1-P	Field mustard	endoplasmic reticulum	36.08	18.07
AT1G77510.1	Thale cress	endoplasmic reticulum	34.9	17.52
Bra008311.1-P	Field mustard	endoplasmic reticulum	34.9	17.42
PGSC0003DMT400036388	Potato	endoplasmic reticulum	30.2	15.75
Solyc05g018700.2.1	Tomato	plastid	29.41	15.12
Zm00001d028726_P001	Maize	plastid	9.41	13.11
Zm00001d016786_P001	Maize	plasma membrane	18.43	11.19
Zm00001d025131_P001	Maize	extracellular, plasma membrane	18.43	11.19
Zm00001d040766_P001	Maize	plasma membrane	16.08	11.17
Zm00001d003654_P001	Maize	endoplasmic reticulum	18.82	10.86
Zm00001d037590_P002	Maize	endoplasmic reticulum	15.69	10.58
Zm00001d054106_P003	Maize	endoplasmic reticulum	22.35	9.98
Zm00001d014912_P003	Maize	extracellular, plasma membrane	21.96	9.98
Zm00001d020687_P002	Maize	endoplasmic reticulum	15.29	8.84
Zm00001d005866_P003	Maize	endoplasmic reticulum	15.29	8.84
Zm00001d045218_P002	Maize	endoplasmic reticulum	14.9	7.18
Zm00001d024894_P016	Maize	plastid	4.71	3.5
Zm00001d015747_P022	Maize	plastid	4.71	3.5
PGSC0003DMT400060279	Potato	cytosol	2.35	3.3
Zm00001d009651_P001	Maize	endoplasmic reticulum	2.35	2.94
Zm00001d019793_P001	Maize	cytosol	0.0	0.0

Protein Annotations

Gene3D:3.40.30.10	MapMan:50.5.3	UniProt:A0A1D6H544	ProteinID:AQK69942.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005623	GO:GO:0008150	GO:GO:0009987	GO:GO:0016853	GO:GO:0019725
GO:GO:0045454	InterPro:IPR013766	PFAM:PF00085	PFscan:PS51352	PANTHER:PTHR18929	PANTHER:PTHR18929:SF186
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI000843C544	EnsemblPlantsGene:Zm00001d016017	EnsemblPlants:Zm00001d016017_P002
EnsemblPlants:Zm00001d016017_T002	:	:	:	:	:

Description

Protein disulfide isomerase-like 1-2

Coordinates

chr5:+:139852314..139856285

Molecular Weight (calculated)

27890.6 Da

IEP (calculated)

4.887

GRAVY (calculated)

-0.004

Length

255 amino acids

Sequence
(BLAST)

001: MNISEAASAG VIKSILYTFS APAEATGVGK ALQAQGLTRG LLAITLGAGS SSLEIMEESH PQLCRALDCL VVITFVGASD LAETELSLKA MWDLMLSNRT
101: CKCGHCKKLA LEYENVAKAL SKHDPPIVLA KVDANEEKNM PLATKYEVQG FPTIKIFRDQ GKNIQEYNGP READGIVDYL KKQVGPASKE IKSPEDAAAL
201: IDDKKIYIVG IFAEFSGTEF TNFMEVAEKL RSDYDLLGSY SYLINIWQWA LLSIL

Best Arabidopsis Sequence Match ( AT1G21750.1 )
(BLAST)

001: MAMRGFTLFS ILVLSLCASS IRSEETETKE FVLTLDHTNF TDTINKHDFI VVEFYAPWCG HCKQLAPEYE KAASALSSNV PPVVLAKIDA SEETNREFAT
101: QYEVQGFPTI KIFRNGGKAV QEYNGPREAE GIVTYLKKQS GPASAEIKSA DDASEVVSDK KVVVVGIFPK LSGSEFDSFM AIAEKLRSEL DFAHTSDAKL
201: LPRGESSVTG PVVRLFKPFD EQFVDSKDFD GEALEKFVKE SSIPLITVFD KDPNNHPYVI KFFESTNTKA MLFINFTGEG AESLKSKYRE VATSNKGQGL
301: SFLLGDAENS QGAFQYFGLE ESQVPLIIIQ TADDKKYLKT NVEVDQIESW VKDFKDGKIA PHKKSQPIPA ENNEPVKVVV SDSLDDIVLN SGKNVLLEFY
401: APWCGHCQKL APILDEVAVS YQSDSSVVIA KLDATANDFP KDTFDVKGFP TIYFKSASGN VVVYEGDRTK EDFISFVDKN KDTVGEPKKE EETTEEVKDE
501: L

Arabidopsis Description

PDIL1-1Protein disulfide isomerase-like 1-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI01]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.