Factsheet for Bra017948.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
endoplasmic reticulum 9
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	endoplasmic reticulum
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	endoplasmic reticulum

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra014057.1-P
Bra022418.1-P
Bra027469.1-P
Bra033657.1-P
Bra038206.1-P
Bra038208.1-P
Bra040749.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G21750.1	Bra014057.1-P	AT1G47128.1	18676877
AT1G21750.1	Bra040749.1-P	AT1G47128.1	18676877
AT1G21750.1	Bra022418.1-P	AT3G19390.1	18676877
AT1G21750.1	Bra038206.1-P	AT3G19390.1	18676877
AT1G21750.1	Bra038208.1-P	AT3G19390.1	18676877
AT1G21750.1	Bra027469.1-P	AT5G42980.1	15352244
AT1G21750.1	Bra033657.1-P	AT5G43060.1	18676877

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY08176	Canola	endoplasmic reticulum	98.19	98.19
Bra016405.1-P	Field mustard	endoplasmic reticulum	84.94	84.43
Bra012293.1-P	Field mustard	endoplasmic reticulum	83.94	84.27
AT1G21750.1	Thale cress	endoplasmic reticulum	82.73	82.24
Bra015665.1-P	Field mustard	endoplasmic reticulum	74.3	72.69
Bra008311.1-P	Field mustard	endoplasmic reticulum	73.09	71.23
PGSC0003DMT400010624	Potato	endoplasmic reticulum	58.84	59.31
GSMUA_Achr1P16970_001	Banana	endoplasmic reticulum	56.22	55.23
Solyc05g056400.2.1	Tomato	plastid	58.63	55.2
GSMUA_Achr3P22070_001	Banana	endoplasmic reticulum	55.82	54.09
PGSC0003DMT400060279	Potato	cytosol	19.68	53.85
Os11t0199200-01	Rice	extracellular, plasma membrane	55.02	53.52
HORVU4Hr1G049820.1	Barley	cytosol	19.48	53.3
Zm00001d028108_P001	Maize	mitochondrion	14.86	52.86
TraesCS4D01G098400.1	Wheat	golgi	54.42	52.62
TraesCS4B01G101800.3	Wheat	golgi	54.02	52.54
TraesCS4A01G214200.2	Wheat	plastid	54.22	52.43
Solyc06g005940.2.1	Tomato	nucleus, plastid	52.41	52.3
Os04t0436300-01	Rice	endoplasmic reticulum	30.72	52.22
KXG26345	Sorghum	endoplasmic reticulum	54.22	52.12
KXG28001	Sorghum	endoplasmic reticulum	53.41	51.65
TraesCS2A01G306500.1	Wheat	endoplasmic reticulum	51.41	49.52
TraesCS2B01G323200.1	Wheat	endoplasmic reticulum	51.2	49.23
TraesCS2D01G305000.1	Wheat	endoplasmic reticulum	51.0	49.13
Os02t0554900-01	Rice	plastid	53.01	48.44
HORVU4Hr1G043910.1	Barley	extracellular	54.22	48.21
Zm00001d007301_P001	Maize	endoplasmic reticulum	52.61	47.72
Zm00001d049099_P005	Maize	endoplasmic reticulum	49.4	46.24
HORVU4Hr1G049880.2	Barley	mitochondrion, plastid	23.9	40.61
Zm00001d016017_P002	Maize	cytosol	19.28	37.65
Zm00001d035557_P001	Maize	mitochondrion	23.69	34.4
Zm00001d041417_P001	Maize	endoplasmic reticulum	14.46	32.58
Bra002464.1-P	Field mustard	endoplasmic reticulum	35.54	29.7
Bra020239.1-P	Field mustard	endoplasmic reticulum	34.94	29.59
HORVU2Hr1G076360.1	Barley	endoplasmic reticulum	29.52	28.27
Bra007120.1-P	Field mustard	endoplasmic reticulum	32.33	27.81
Bra004455.1-P	Field mustard	endoplasmic reticulum	19.48	26.87
Bra000454.1-P	Field mustard	endoplasmic reticulum	18.88	25.97
Bra034408.1-P	Field mustard	endoplasmic reticulum	21.49	24.6
Bra014319.1-P	Field mustard	endoplasmic reticulum	18.88	22.76
Bra018958.1-P	Field mustard	endoplasmic reticulum	23.9	22.5
Bra018672.1-P	Field mustard	endoplasmic reticulum	6.43	22.22
Bra015375.1-P	Field mustard	endoplasmic reticulum	18.67	21.53
Bra005546.1-P	Field mustard	endoplasmic reticulum	18.47	20.77

Protein Annotations

Gene3D:3.40.30.10	MapMan:50.5.3	EnsemblPlantsGene:Bra017948	EnsemblPlants:Bra017948.1	EnsemblPlants:Bra017948.1-P	InterPro:Disulphide_isomerase
GO:GO:0003674	GO:GO:0003756	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0008150	GO:GO:0009987	GO:GO:0016853	GO:GO:0019725
GO:GO:0045454	InterPro:IPR013766	UniProt:M4DN61	PFAM:PF00085	PFAM:PF13848	PRINTS:PR00421
ScanProsite:PS00194	PFscan:PS51257	PFscan:PS51352	PANTHER:PTHR18929	PANTHER:PTHR18929:SF186	InterPro:Prot_disulphide_isomerase
SUPFAM:SSF52833	SignalP:SignalP-noTM	TIGRFAMs:TIGR01126	TIGRFAMs:TIGR01130	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS
InterPro:Thioredoxin_domain	UniParc:UPI000253F143	SEG:seg	:	:	:

Description

AT1G21750 (E=2e-232) ATPDIL1-1, ATPDI5, PDI5 | ATPDIL1-1 (PDI-LIKE 1-1); protein disulfide isomerase

Coordinates

chrA06:+:9010607..9013155

Molecular Weight (calculated)

55524.7 Da

IEP (calculated)

4.991

GRAVY (calculated)

-0.313

Length

498 amino acids

Sequence
(BLAST)

001: MAMKGYTLCS ILVFSLFASC VRSKETKEFV LTLDHTNFTE TINKHDFIVV EFYAPWCGHC KQLAPEYEKA ASELSSHVPP VVLAKIDASE ETNKEFATKY
101: SVQGFPTIKI LRNGGKAVQE YNGPREADGI VTYLKKQSGP ASLEIKSADA ASEVVGDKNV VAVGVFPKLS GAEFDSFMAT AEKLRSDYDF AHTTDAKLLP
201: RGESVTGPVV RLFKPFDELF VDFRDFVGEA LEKFVKESSI PLITVFDSDP NNHPYVLKFF EIPNTKALFF LNFNGEGAET LKSKYREVAA SNKGHGLSFL
301: LGDAKNSEEA LQHYGVEQRQ LPLIILQTVD DKKYLKTNVE VDQIESWIND FKDGKASPYK KSQPIPGENN EPVKVVVAEN LDEMVFSSGK NVLLEFYAPW
401: CGHCQNLVPI LDEVAVSYQS DPSVVIAKFD ATANDFPHDT FDVKGFPTIY LRSANGNIVL YKGDRTKEDI ISFIDKNKDT AGETKTEEKK TKEVKDEL

Best Arabidopsis Sequence Match ( AT1G21750.1 )
(BLAST)

001: MAMRGFTLFS ILVLSLCASS IRSEETETKE FVLTLDHTNF TDTINKHDFI VVEFYAPWCG HCKQLAPEYE KAASALSSNV PPVVLAKIDA SEETNREFAT
101: QYEVQGFPTI KIFRNGGKAV QEYNGPREAE GIVTYLKKQS GPASAEIKSA DDASEVVSDK KVVVVGIFPK LSGSEFDSFM AIAEKLRSEL DFAHTSDAKL
201: LPRGESSVTG PVVRLFKPFD EQFVDSKDFD GEALEKFVKE SSIPLITVFD KDPNNHPYVI KFFESTNTKA MLFINFTGEG AESLKSKYRE VATSNKGQGL
301: SFLLGDAENS QGAFQYFGLE ESQVPLIIIQ TADDKKYLKT NVEVDQIESW VKDFKDGKIA PHKKSQPIPA ENNEPVKVVV SDSLDDIVLN SGKNVLLEFY
401: APWCGHCQKL APILDEVAVS YQSDSSVVIA KLDATANDFP KDTFDVKGFP TIYFKSASGN VVVYEGDRTK EDFISFVDKN KDTVGEPKKE EETTEEVKDE
501: L

Arabidopsis Description

PDIL1-1Protein disulfide isomerase-like 1-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI01]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.