Factsheet for HORVU2Hr1G076360.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 2
endoplasmic reticulum 3
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
TargetP:	secretory

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G075560.1
HORVU2Hr1G113460.2
HORVU2Hr1G121150.1
HORVU2Hr1G121440.2
HORVU7Hr1G055310.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G21750.1	HORVU2Hr1G113460.2	AT1G47128.1	18676877
AT1G21750.1	HORVU2Hr1G121150.1	AT3G19390.1	18676877
AT1G21750.1	HORVU2Hr1G121440.2	AT3G19390.1	18676877
AT1G21750.1	HORVU7Hr1G055310.1	AT3G19390.1	18676877
AT1G21750.1	HORVU2Hr1G121150.1	AT3G19400.1	18676877
AT1G21750.1	HORVU2Hr1G121440.2	AT3G19400.1	18676877
AT1G21750.1	HORVU7Hr1G055310.1	AT3G19400.1	18676877
AT1G21750.1	HORVU1Hr1G075560.1	AT5G42980.1	15352244
AT1G21750.1	HORVU2Hr1G113460.2	AT5G43060.1	18676877

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0436300-01	Rice	endoplasmic reticulum	38.65	68.6
TraesCS2D01G305000.1	Wheat	endoplasmic reticulum	50.0	50.29
TraesCS2A01G306500.1	Wheat	endoplasmic reticulum	49.81	50.1
TraesCS2B01G323200.1	Wheat	endoplasmic reticulum	49.81	50.0
HORVU4Hr1G049820.1	Barley	cytosol	16.15	46.15
KXG26345	Sorghum	endoplasmic reticulum	40.0	40.15
HORVU4Hr1G049880.2	Barley	mitochondrion, plastid	20.58	36.52
Solyc06g060290.2.1	Tomato	plastid	28.65	34.02
Bra012293.1-P	Field mustard	endoplasmic reticulum	28.27	29.64
Bra017948.1-P	Field mustard	endoplasmic reticulum	28.27	29.52
PGSC0003DMT400045299	Potato	endoplasmic reticulum	28.08	29.38
Bra016405.1-P	Field mustard	endoplasmic reticulum	27.88	28.94
AT1G77510.1	Thale cress	endoplasmic reticulum	28.08	28.74
AT1G21750.1	Thale cress	endoplasmic reticulum	27.5	28.54
Bra015665.1-P	Field mustard	endoplasmic reticulum	27.69	28.29
Solyc06g005940.2.1	Tomato	nucleus, plastid	26.73	27.86
PGSC0003DMT400010624	Potato	endoplasmic reticulum	26.35	27.73
Bra008311.1-P	Field mustard	endoplasmic reticulum	27.12	27.59
VIT_07s0031g02660.t01	Wine grape	endoplasmic reticulum	26.35	27.4
HORVU4Hr1G043910.1	Barley	extracellular	28.08	26.07
Solyc05g056400.2.1	Tomato	plastid	26.35	25.9
PGSC0003DMT400036388	Potato	endoplasmic reticulum	24.04	25.56
Solyc05g018700.2.1	Tomato	plastid	23.08	24.19
HORVU6Hr1G001640.1	Barley	endoplasmic reticulum	12.31	22.22
HORVU4Hr1G056730.1	Barley	endoplasmic reticulum	6.92	21.95
HORVU5Hr1G114600.1	Barley	endoplasmic reticulum	10.96	19.39
HORVU6Hr1G001800.2	Barley	endoplasmic reticulum	10.58	17.68
HORVU2Hr1G075810.1	Barley	endoplasmic reticulum	14.04	17.63
HORVU6Hr1G059710.1	Barley	endoplasmic reticulum	13.46	15.62
HORVU4Hr1G034020.1	Barley	cytosol	3.46	13.74
HORVU1Hr1G022810.1	Barley	endoplasmic reticulum	10.19	13.15
HORVU6Hr1G001700.1	Barley	endoplasmic reticulum, plastid	14.23	11.65
HORVU4Hr1G048980.2	Barley	cytosol	6.54	11.64
HORVU5Hr1G067570.1	Barley	plasma membrane	9.62	9.65
HORVU7Hr1G026030.1	Barley	cytosol	7.31	6.48
CDX79207	Canola	cytosol	0.58	2.48
KRH64647	Soybean	cytosol, mitochondrion	0.96	2.36
PGSC0003DMT400060279	Potato	cytosol	0.19	0.55

Protein Annotations

Gene3D:3.40.30.10	MapMan:50.5.3	ncoils:Coil	InterPro:Disulphide_isomerase	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0009987	GO:GO:0016853	GO:GO:0019725	GO:GO:0045454	EnsemblPlantsGene:HORVU2Hr1G076360
EnsemblPlants:HORVU2Hr1G076360.1	InterPro:IPR013766	PFAM:PF00085	PFAM:PF13848	PRINTS:PR00421	ScanProsite:PS00194
PFscan:PS51352	PANTHER:PTHR18929	PANTHER:PTHR18929:SF186	SUPFAM:SSF52833	SignalP:SignalP-noTM	TIGRFAMs:TIGR01126
InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr2H:-:549746030..549751399

Molecular Weight (calculated)

36805.7 Da

IEP (calculated)

4.939

GRAVY (calculated)

-0.089

Length

520 amino acids

Sequence
(BLAST)

001: LALPFATLAL VLLLSSGSIA AEVDATAMPG EAVLTLDAGN FSEVVTKHEF IVVEFYAPWC GHCKELAPEY EKAASVLRKR DPPVVLAKVD AYDENNKELK
101: DKYKVHGYPA IKIIRKGGSD VSAYGGPRDA EGIVEYLMRQ VGPASLEIKS AVDASRSIGD KGVVLVGVFP EFAGIEYENF MAVANKMRTD YDFFHTLDAS
201: ILPRGDLTVK GPLIRLFKPF DELFVDSQDF DSDAIKKFIE VSGFPTVVTF NADPTNHKFI ERYYSTPSAK XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
301: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
401: XXXXXXXXXX XXXXXXXXXX XXXXXFDELF VDSQDFDSDA IKKFIEVSGF PTVVTFNADP TNHKFIERYY STPSAKDQRL RLHECXXXXX XXXXXXXXXX
501: XXXXXXXXXX XXXXXXXXXH

Best Arabidopsis Sequence Match ( AT1G21750.1 )
(BLAST)

001: MAMRGFTLFS ILVLSLCASS IRSEETETKE FVLTLDHTNF TDTINKHDFI VVEFYAPWCG HCKQLAPEYE KAASALSSNV PPVVLAKIDA SEETNREFAT
101: QYEVQGFPTI KIFRNGGKAV QEYNGPREAE GIVTYLKKQS GPASAEIKSA DDASEVVSDK KVVVVGIFPK LSGSEFDSFM AIAEKLRSEL DFAHTSDAKL
201: LPRGESSVTG PVVRLFKPFD EQFVDSKDFD GEALEKFVKE SSIPLITVFD KDPNNHPYVI KFFESTNTKA MLFINFTGEG AESLKSKYRE VATSNKGQGL
301: SFLLGDAENS QGAFQYFGLE ESQVPLIIIQ TADDKKYLKT NVEVDQIESW VKDFKDGKIA PHKKSQPIPA ENNEPVKVVV SDSLDDIVLN SGKNVLLEFY
401: APWCGHCQKL APILDEVAVS YQSDSSVVIA KLDATANDFP KDTFDVKGFP TIYFKSASGN VVVYEGDRTK EDFISFVDKN KDTVGEPKKE EETTEEVKDE
501: L

Arabidopsis Description

PDIL1-1Protein disulfide isomerase-like 1-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI01]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.