Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G034020.1 | Barley | cytosol | 36.99 | 82.44 |
| HORVU6Hr1G001640.1 | Barley | endoplasmic reticulum | 33.56 | 34.03 |
| HORVU6Hr1G001700.1 | Barley | endoplasmic reticulum, plastid | 68.15 | 31.34 |
| HORVU5Hr1G114600.1 | Barley | endoplasmic reticulum | 28.42 | 28.23 |
| HORVU6Hr1G001800.2 | Barley | endoplasmic reticulum | 27.74 | 26.05 |
| HORVU4Hr1G049820.1 | Barley | cytosol | 9.59 | 15.38 |
| HORVU7Hr1G026030.1 | Barley | cytosol | 23.63 | 11.77 |
| HORVU2Hr1G075810.1 | Barley | endoplasmic reticulum | 15.75 | 11.11 |
| HORVU4Hr1G049880.2 | Barley | mitochondrion, plastid | 9.59 | 9.56 |
| HORVU4Hr1G043910.1 | Barley | extracellular | 17.12 | 8.93 |
| HORVU6Hr1G059710.1 | Barley | endoplasmic reticulum | 13.7 | 8.93 |
| HORVU2Hr1G076360.1 | Barley | endoplasmic reticulum | 11.64 | 6.54 |
| HORVU5Hr1G067570.1 | Barley | plasma membrane | 7.53 | 4.25 |
| HORVU4Hr1G056730.1 | Barley | endoplasmic reticulum | 2.05 | 3.66 |
| HORVU1Hr1G022810.1 | Barley | endoplasmic reticulum | 2.74 | 1.99 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G048980.2 | EnsemblPlantsGene:HORVU4Hr1G048980 | Gene3D:3.40.30.10 | InterPro:Thioredoxin-like_sf | ncoils:Coil | PANTHER:PTHR18929 |
| PANTHER:PTHR18929:SF121 | PFAM:PF13848 | SUPFAM:SSF52833 | UniParc:UPI000B46EEE0 | UniProt:A0A287NYR9 | MapMan:35.1 |
Description
No Description!
Coordinates
chrchr4H:-:395737080..395740153
Molecular Weight (calculated)
32789.4 Da
IEP (calculated)
8.059
GRAVY (calculated)
-0.209
Length
292 amino acids
Sequence
(BLAST)
(BLAST)
001: RAACLGWRAA TEGPKAKGNS GSDRRFKPCQ WILLEEVFQS KGEEMLLVNT NTSRFLRRRE YSGERTKDAI MAWINKKLGP AMQNLTIVNE AEKVVTGDDV
101: AVLAYVHDLS GAHSDELDAA SRLEDTVSFY QTTSPDVAKL FHIDPEEKRP SVVLLKKEEE KLTVFDGEFR VSAIAEFISA NKIPLITTLT QETAPTIFDN
201: PIKKQILLFA VAKESSKFVC ILKEAAKSFK GKRLFVFVEL DNEEVGEPVA NYFGITGQET TFLLTLGMKT LRSFSSVVKY HWTTLRNLLK IS
101: AVLAYVHDLS GAHSDELDAA SRLEDTVSFY QTTSPDVAKL FHIDPEEKRP SVVLLKKEEE KLTVFDGEFR VSAIAEFISA NKIPLITTLT QETAPTIFDN
201: PIKKQILLFA VAKESSKFVC ILKEAAKSFK GKRLFVFVEL DNEEVGEPVA NYFGITGQET TFLLTLGMKT LRSFSSVVKY HWTTLRNLLK IS
001: MAFRVLLLFS LTALLIFSAV SPSFAASSSD DVDDEDLSFL EDLKEDDVPG ADSLSSSTGF DEFEGGEEED PDMYNDDDDE EGDFSDLGNP DSDPLPTPEI
101: DEKDVVVIKE RNFTDVIENN QYVLVEFYAP WCGHCQSLAP EYAAAATELK EDGVVLAKID ATEENELAQE YRVQGFPTLL FFVDGEHKPY TGGRTKETIV
201: TWVKKKIGPG VYNLTTLDDA EKVLTSGNKV VLGYLNSLVG VEHDQLNAAS KAEDDVNFYQ TVNPDVAKMF HLDPESKRPA LVLVKKEEEK ISHFDGEFVK
301: SALVSFVSAN KLALVSVFTR ETAPEIFESA IKKQLLLFVT KNESEKVLTE FQEAAKSFKG KLIFVSVDLD NEDYGKPVAE YFGVSGNGPK LIGYTGNEDP
401: KKYFFDGEIQ SDKIKIFGED FLNDKLKPFY KSDPIPEKND EDVKIVVGDN FDEIVLDDSK DVLLEVYAPW CGHCQALEPM YNKLAKHLRS IDSLVITKMD
501: GTTNEHPKAK AEGFPTILFF PAGNKTSEPI TVDTDRTVVA FYKFLRKHAT IPFKLEKPAS TESPKTAEST PKVETTETKE SPDSTTKSSQ SDSKDEL
101: DEKDVVVIKE RNFTDVIENN QYVLVEFYAP WCGHCQSLAP EYAAAATELK EDGVVLAKID ATEENELAQE YRVQGFPTLL FFVDGEHKPY TGGRTKETIV
201: TWVKKKIGPG VYNLTTLDDA EKVLTSGNKV VLGYLNSLVG VEHDQLNAAS KAEDDVNFYQ TVNPDVAKMF HLDPESKRPA LVLVKKEEEK ISHFDGEFVK
301: SALVSFVSAN KLALVSVFTR ETAPEIFESA IKKQLLLFVT KNESEKVLTE FQEAAKSFKG KLIFVSVDLD NEDYGKPVAE YFGVSGNGPK LIGYTGNEDP
401: KKYFFDGEIQ SDKIKIFGED FLNDKLKPFY KSDPIPEKND EDVKIVVGDN FDEIVLDDSK DVLLEVYAPW CGHCQALEPM YNKLAKHLRS IDSLVITKMD
501: GTTNEHPKAK AEGFPTILFF PAGNKTSEPI TVDTDRTVVA FYKFLRKHAT IPFKLEKPAS TESPKTAEST PKVETTETKE SPDSTTKSSQ SDSKDEL
Arabidopsis Description
PDIL1-4Protein disulfide-isomerase [Source:UniProtKB/TrEMBL;Acc:A0A178UQB2]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.