Factsheet for HORVU5Hr1G067570.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

mitochondrion 1
endoplasmic reticulum 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
TargetP:	plastid
YLoc:	cytosol

plasma membrane: 29385242

msms PMID: 29385242 doi

K Witzel, A Matros, ALB Møller, E Ramireddy, C Finnie, M Peukert, T Rutten, A Herzog, G Kunze, M Melzer, S Kaspar-Schoenefeld, T Schmülling, B Svensson, HP Mock

Biosystems Engineering, Fraunhofer Institute for Factory Operation and Automation, Joseph-von-Fraunhofer-Straße 1, 39106, Magdeburg, Germany., Institute of Biology/Applied Genetics, Dahlem Centre of Plant Sciences, Free University of Berlin, Albrecht-Thaer-Weg 6, 14195, Berlin, Germany., Leibniz Institute of Plant Genetics and Crop Plant Research, Corrensstraße 3, 06466, Stadt Seeland, Gatersleben, Germany., Leibniz Institute of Vegetable and Ornamental Crops, Theodor-Echtermeyer-Weg 1, 14979, Großbeeren, Germany., Technical University of Denmark, Søltofts Plads, Building 224, 2800, Kongens Lyngby, Denmark.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G232900.1	Wheat	golgi	83.78	98.64
TraesCS5A01G234400.1	Wheat	golgi	83.59	98.41
TraesCS5D01G241200.1	Wheat	golgi	83.01	97.73
Os09t0451500-02	Rice	plasma membrane	75.87	89.12
EER96832	Sorghum	endoplasmic reticulum	74.52	87.93
Zm00001d020687_P002	Maize	endoplasmic reticulum	74.71	87.76
Zm00001d005866_P003	Maize	endoplasmic reticulum	73.75	86.62
VIT_12s0059g01560.t01	Wine grape	endoplasmic reticulum	64.86	77.6
KRH73319	Soybean	endoplasmic reticulum	64.86	76.71
KRH14820	Soybean	endoplasmic reticulum	64.48	76.26
Solyc07g049450.2.1	Tomato	nucleus	63.32	75.93
PGSC0003DMT400001769	Potato	extracellular	63.32	75.93
GSMUA_Achr7P12170_001	Banana	endoplasmic reticulum	63.13	75.87
Bra015375.1-P	Field mustard	endoplasmic reticulum	61.58	73.84
CDY53400	Canola	endoplasmic reticulum	47.68	73.08
CDY18278	Canola	endoplasmic reticulum	61.39	72.94
CDY12149	Canola	endoplasmic reticulum	61.39	71.78
Bra005546.1-P	Field mustard	endoplasmic reticulum	61.2	71.56
CDY52544	Canola	endoplasmic reticulum	61.2	71.4
AT1G04980.1	Thale cress	endoplasmic reticulum	60.42	70.02
CDX79497	Canola	endoplasmic reticulum	59.85	69.98
AT2G32920.1	Thale cress	endoplasmic reticulum	59.27	69.77
HORVU1Hr1G022810.1	Barley	endoplasmic reticulum	20.08	25.81
HORVU4Hr1G056730.1	Barley	endoplasmic reticulum	7.92	25.0
HORVU4Hr1G043910.1	Barley	extracellular	19.3	17.86
HORVU6Hr1G001700.1	Barley	endoplasmic reticulum, plastid	17.57	14.33
HORVU6Hr1G001640.1	Barley	endoplasmic reticulum	7.53	13.54
HORVU2Hr1G075810.1	Barley	endoplasmic reticulum	10.81	13.53
HORVU6Hr1G059710.1	Barley	endoplasmic reticulum	10.81	12.5
HORVU5Hr1G114600.1	Barley	endoplasmic reticulum	6.95	12.24
HORVU6Hr1G001800.2	Barley	endoplasmic reticulum	7.14	11.9
HORVU4Hr1G049880.2	Barley	mitochondrion, plastid	6.37	11.26
HORVU4Hr1G049820.1	Barley	cytosol	3.86	10.99
HORVU2Hr1G076360.1	Barley	endoplasmic reticulum	9.65	9.62
HORVU7Hr1G026030.1	Barley	cytosol	8.69	7.68
HORVU4Hr1G048980.2	Barley	cytosol	4.25	7.53
HORVU4Hr1G034020.1	Barley	cytosol	1.16	4.58

Protein Annotations

MapMan:18.11.1.2	Gene3D:3.40.30.10	UniProt:A0A287RLW1	InterPro:Disulphide_isomerase	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005788
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016853	GO:GO:0019725
GO:GO:0045454	EnsemblPlantsGene:HORVU5Hr1G067570	EnsemblPlants:HORVU5Hr1G067570.1	InterPro:IPR013766	PFAM:PF00085	PRINTS:PR00421
ScanProsite:PS00194	PFscan:PS51352	PANTHER:PTHR18929	PANTHER:PTHR18929:SF38	SUPFAM:SSF52833	TIGRFAMs:TIGR01126
TMHMM:TMhelix	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain	UniParc:UPI000B4824A4	SEG:seg

Description

No Description!

Coordinates

chrchr5H:+:513285275..513290639

Molecular Weight (calculated)

55618.1 Da

IEP (calculated)

6.931

GRAVY (calculated)

-0.267

Length

518 amino acids

Sequence
(BLAST)

001: HPVLQPCHGR NQSRRAKRAK PFRRGRAPDV DAHDWSAHAF VSSLASKLKS APPRPGDAAD RSPPSSPPSG FQKLLDDAMR PAILAALLLL LAAAASPAAA
101: LYSAGSPVLQ LNPNNFKKVL NANGVVLVEF FAPWCGHCKQ LTPIWEKAAG VLKGVATVAA LDADAHKELA QQYGIRGFPT IKVFLPGKPP VDYEGARDVK
201: PIVNFALSQV KGLLRDRLDG KASGGSSSKT SGGSSEKKNE PNESVELNSS NFDELVIKSK DLWIVEFFAP WCGHCKKLAP EWKRAAKNLK GQVKLGHVDC
301: DSDKSLMSKY KVEGFPTILV FGADKDSPFP YQGARAASAI ESFALEQLEA NAAPPEVSEL TSADVMEEKC ASAAICFVSF LPDILDSKAE GRNKYLELLL
401: SVAEKFKKSP YSFVWAGAGK QADLEKQVGV GGYGYPAMVA LNVKKGAYAP LRSAFELAEI TEFVKEAGRG GKGNLPLEGA PTVVQSEPWD GKDGEVIEED
501: EFSLEELMAD SSAPNDEL

Best Arabidopsis Sequence Match ( AT1G04980.1 )
(BLAST)

001: MERKMYKSTV FPICCLLFAL FDRGNALYGS SSPVLQLTPS NFKSKVLNSN GVVLVEFFAP WCGHCQSLTP TWEKVASTLK GIATVAAIDA DAHKSVSQDY
101: GVRGFPTIKV FVPGKPPIDY QGARDAKSIS QFAIKQIKAL LKDRLDGKTS GTKNGGGSSE KKKSEPSASV ELNSSNFDEL VTESKELWIV EFFAPWCGHC
201: KKLAPEWKKA ANNLKGKVKL GHVNCDAEQS IKSRFKVQGF PTILVFGSDK SSPVPYEGAR SASAIESFAL EQLESNAGPA EVTELTGPDV MEDKCGSAAI
301: CFVSFLPDIL DSKAEGRNKY LEMLLSVADK FKKDPYGFVW VAAGKQPDLE KRVGVGGYGY PAMVALNAKK GAYAPLKSGF EVKHLKDFVK EAAKGGKGNL
401: PIDGTMEIVK TEAWDGKDGE VVDADEFSLE DLMGNDDEAS TESKDDL

Arabidopsis Description

PDIL2-2Protein disulfide-isomerase like 2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAU6]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.