Factsheet for HORVU5Hr1G114600.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 1
peroxisome 1
extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	peroxisome, plastid, secretory
iPSORT:	plastid
MultiLoc:	peroxisome
TargetP:	secretory
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G001800.2	Barley	endoplasmic reticulum	84.69	80.06
TraesCS6A01G003200.1	Wheat	endoplasmic reticulum	79.25	79.25
HORVU6Hr1G001640.1	Barley	endoplasmic reticulum	50.34	51.39
HORVU4Hr1G048980.2	Barley	cytosol	28.23	28.42
HORVU4Hr1G034020.1	Barley	cytosol	12.24	27.48
HORVU6Hr1G001700.1	Barley	endoplasmic reticulum, plastid	56.46	26.14
HORVU4Hr1G056730.1	Barley	endoplasmic reticulum	10.88	19.51
HORVU4Hr1G049880.2	Barley	mitochondrion, plastid	14.29	14.33
HORVU2Hr1G075810.1	Barley	endoplasmic reticulum	19.39	13.77
HORVU4Hr1G049820.1	Barley	cytosol	8.5	13.74
HORVU6Hr1G059710.1	Barley	endoplasmic reticulum	17.35	11.38
HORVU2Hr1G076360.1	Barley	endoplasmic reticulum	19.39	10.96
HORVU4Hr1G043910.1	Barley	extracellular	20.41	10.71
HORVU1Hr1G022810.1	Barley	endoplasmic reticulum	13.95	10.17
HORVU5Hr1G067570.1	Barley	plasma membrane	12.24	6.95
HORVU7Hr1G026030.1	Barley	cytosol	13.61	6.83
Zm00001d019793_P001	Maize	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU5Hr1G114600.1	EnsemblPlantsGene:HORVU5Hr1G114600	Gene3D:3.40.30.10	GO:GO:0005575	GO:GO:0005623	GO:GO:0008150
GO:GO:0009987	GO:GO:0019725	GO:GO:0045454	InterPro:IPR013766	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain
PANTHER:PTHR18929	PANTHER:PTHR18929:SF121	PFAM:PF00085	PFscan:PS51352	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF52833	UniParc:UPI000B46CEDE	UniProt:A0A287STI3	MapMan:35.1	:	:

Description

No Description!

Coordinates

chrchr5H:-:644326750..644328315

Molecular Weight (calculated)

32076.6 Da

IEP (calculated)

5.329

GRAVY (calculated)

-0.150

Length

294 amino acids

Sequence
(BLAST)

001: KHTPSHSSAL MPRPMPSPCF LLLLLSYTSA SDVNLDNIIN NAGADATAGN NPEDRGPAYN RYGEDLFATD DDSPEAVDEA HVVVLTVANF SSFLAARRHV
101: MVDFYVPWRS WSRKLAPEYA AAASHLADTG LDVALAKVDV ARNNQLARAH DVIGYPTVHF FVDGAVPKGY RYYGERTKDA IVAWITRKLG PAVRNISTVD
201: EAEKIVADHG MAVLAFLDSL SGGHSDELAA ASRLEDSINV YQTTSPDVAE LFGVDPEAKR PLVVLLEADH EGKLTVSRYR RSTLSDLFLN HSLL

Best Arabidopsis Sequence Match ( AT3G54960.1 )
(BLAST)

001: MASSSTSISL LLFVSFILLL VNSRAENASS GSDLDEELAF LAAEESKEQS HGGGSYHEEE HDHQHRDFEN YDDLEQGGGE FHHGDHGYEE EPLPPVDEKD
101: VAVLTKDNFT EFVGNNSFAM VEFYAPWCGA CQALTPEYAA AATELKGLAA LAKIDATEEG DLAQKYEIQG FPTVFLFVDG EMRKTYEGER TKDGIVTWLK
201: KKASPSIHNI TTKEEAERVL SAEPKLVFGF LNSLVGSESE ELAAASRLED DLSFYQTASP DIAKLFEIET QVKRPALVLL KKEEEKLARF DGNFTKTAIA
301: EFVSANKVPL VINFTREGAS LIFESSVKNQ LILFAKANES EKHLPTLREV AKSFKGKFVF VYVQMDNEDY GEAVSGFFGV TGAAPKVLVY TGNEDMRKFI
401: LDGELTVNNI KTLAEDFLAD KLKPFYKSDP LPENNDGDVK VIVGNNFDEI VLDESKDVLL EIYAPWCGHC QSFEPIYNKL GKYLKGIDSL VVAKMDGTSN
501: EHPRAKADGF PTILFFPGGN KSFDPIAVDV DRTVVELYKF LKKHASIPFK LEKPATPEPV ISTMKSDEKI EGDSSKDEL

Arabidopsis Description

PDIL1-3PDIL1-3 [Source:UniProtKB/TrEMBL;Acc:A0A178VF09]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.