Factsheet for HORVU4Hr1G056730.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 1
mitochondrion 2
endoplasmic reticulum 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	endoplasmic reticulum, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
TargetP:	mitochondrion
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G107900.1	Wheat	endoplasmic reticulum	89.63	97.35
TraesCS4D01G197000.1	Wheat	endoplasmic reticulum	89.02	96.69
TraesCS4B01G196700.2	Wheat	endoplasmic reticulum	84.76	89.1
Os03t0287900-01	Rice	endoplasmic reticulum	75.0	83.67
EER92421	Sorghum	endoplasmic reticulum	74.39	81.33
Zm00001d028726_P001	Maize	plastid	81.1	72.68
VIT_06s0004g03250.t01	Wine grape	endoplasmic reticulum	62.8	69.59
GSMUA_Achr10P...	Banana	endoplasmic reticulum	64.02	69.08
KRH10410	Soybean	endoplasmic reticulum	57.32	66.67
AT1G07960.4	Thale cress	endoplasmic reticulum	57.93	65.07
KRH22935	Soybean	endoplasmic reticulum	57.93	64.63
Bra018672.1-P	Field mustard	endoplasmic reticulum	56.71	64.58
CDX93606	Canola	endoplasmic reticulum	56.71	64.58
CDX95112	Canola	endoplasmic reticulum	56.1	63.89
Solyc11g069690.1.1	Tomato	extracellular	48.17	63.2
PGSC0003DMT400050665	Potato	endoplasmic reticulum	50.0	40.59
HORVU1Hr1G022810.1	Barley	endoplasmic reticulum	31.71	12.9
HORVU5Hr1G114600.1	Barley	endoplasmic reticulum	19.51	10.88
HORVU6Hr1G001640.1	Barley	endoplasmic reticulum	18.29	10.42
HORVU6Hr1G001800.2	Barley	endoplasmic reticulum	19.51	10.29
HORVU4Hr1G049880.2	Barley	mitochondrion, plastid	14.63	8.19
HORVU5Hr1G067570.1	Barley	plasma membrane	25.0	7.92
HORVU2Hr1G075810.1	Barley	endoplasmic reticulum	19.51	7.73
HORVU4Hr1G043910.1	Barley	extracellular	26.22	7.68
HORVU2Hr1G076360.1	Barley	endoplasmic reticulum	21.95	6.92
HORVU6Hr1G059710.1	Barley	endoplasmic reticulum	18.9	6.92
HORVU4Hr1G049820.1	Barley	cytosol	6.1	5.49
HORVU6Hr1G001700.1	Barley	endoplasmic reticulum, plastid	20.73	5.35
HORVU4Hr1G048980.2	Barley	cytosol	3.66	2.05
HORVU7Hr1G026030.1	Barley	cytosol	6.1	1.71
HORVU4Hr1G034020.1	Barley	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU4Hr1G056730.1	EnsemblPlantsGene:HORVU4Hr1G056730	Gene3D:3.40.30.10	GO:GO:0005575	GO:GO:0005623	GO:GO:0008150
GO:GO:0009987	GO:GO:0019725	GO:GO:0045454	InterPro:IPR013766	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain
PANTHER:PTHR18929	PANTHER:PTHR18929:SF180	PFAM:PF00085	PFscan:PS51352	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF52833	TMHMM:TMhelix	UniParc:UPI000B46720E	UniProt:A0A287P666	MapMan:35.1	:

Description

No Description!

Coordinates

chrchr4H:+:476590992..476593244

Molecular Weight (calculated)

18197.8 Da

IEP (calculated)

5.092

GRAVY (calculated)

-0.154

Length

164 amino acids

Sequence
(BLAST)

001: VSPSSPWPSS VRAMDPALRR RSRLPIHLLL VAVTLLAALA ARSGAEVITL TEETFSDKIK EKDTVWFVQF CVPWCKHCKS LGTLWEDLGK VIEGTDEIEI
101: GKVDCGASKP VCSKVDIHSY PTFKVFYDGE EVAKYKGPRD VESLKNFVLN EAEKAGEATL EDEL

Best Arabidopsis Sequence Match ( AT1G07960.2 )
(BLAST)

001: MTLGARLVAP MIILLLFIPI ELVKAEVITL TPETFSDKIK EKDTAWFVKF CVPWCKHCKK LGNLWEDLGK AMEGDDEIEV GEVDCGTSRA VCTKVEIHSY
101: PTFMLFYNGE EVSKYKGKRD VESLKAFVVE ETEKAAEKAQ LEDKEL

Arabidopsis Description

PDIL5-1PDIL5-1 [Source:UniProtKB/TrEMBL;Acc:A0A178WDX4]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.