Factsheet for HORVU4Hr1G043910.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 2
mitochondrion 1
endoplasmic reticulum 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	endoplasmic reticulum, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
TargetP:	plastid
YLoc:	cytosol

extracellular: 26928395

msms PMID: 26928395 doi

A Sultan, B Andersen, B Svensson, C Finnie

Agricultural and Environmental Proteomics, Department of Systems Biology, Technical University of Denmark , Søltofts Plads, Building 224, DK-2800 Kgs. Lyngby, Denmark., Enzyme and Protein Chemistry, Department of Systems Biology, Technical University of Denmark , Elektrovej, Building 375, DK-2800 Kgs. Lyngby, Denmark.

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G075560.1
HORVU2Hr1G113460.2
HORVU2Hr1G121150.1
HORVU2Hr1G121440.2
HORVU7Hr1G055310.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G21750.1	HORVU2Hr1G113460.2	AT1G47128.1	18676877
AT1G21750.1	HORVU2Hr1G121150.1	AT3G19390.1	18676877
AT1G21750.1	HORVU2Hr1G121440.2	AT3G19390.1	18676877
AT1G21750.1	HORVU7Hr1G055310.1	AT3G19390.1	18676877
AT1G21750.1	HORVU2Hr1G121150.1	AT3G19400.1	18676877
AT1G21750.1	HORVU2Hr1G121440.2	AT3G19400.1	18676877
AT1G21750.1	HORVU7Hr1G055310.1	AT3G19400.1	18676877
AT1G21750.1	HORVU1Hr1G075560.1	AT5G42980.1	15352244
AT1G21750.1	HORVU2Hr1G113460.2	AT5G43060.1	18676877

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G101800.3	Wheat	golgi	88.57	96.88
TraesCS4A01G214200.2	Wheat	plastid	88.93	96.7
TraesCS4D01G098400.1	Wheat	golgi	88.57	96.31
Os11t0199200-01	Rice	extracellular, plasma membrane	77.68	84.96
HORVU4Hr1G049820.1	Barley	cytosol	27.32	84.07
KXG28001	Sorghum	endoplasmic reticulum	71.61	77.86
Zm00001d007301_P001	Maize	endoplasmic reticulum	70.71	72.13
Zm00001d049099_P005	Maize	endoplasmic reticulum	67.5	71.05
HORVU4Hr1G049880.2	Barley	mitochondrion, plastid	34.82	66.55
GSMUA_Achr1P16970_001	Banana	endoplasmic reticulum	55.89	61.74
Solyc06g060290.2.1	Tomato	plastid	46.61	59.59
Bra016405.1-P	Field mustard	endoplasmic reticulum	52.68	58.88
PGSC0003DMT400045299	Potato	endoplasmic reticulum	52.14	58.75
Bra012293.1-P	Field mustard	endoplasmic reticulum	51.79	58.47
PGSC0003DMT400010624	Potato	endoplasmic reticulum	50.89	57.69
AT1G21750.1	Thale cress	endoplasmic reticulum	51.25	57.29
GSMUA_Achr3P22070_001	Banana	endoplasmic reticulum	51.43	56.03
AT1G77510.1	Thale cress	endoplasmic reticulum	50.18	55.31
Bra015665.1-P	Field mustard	endoplasmic reticulum	50.0	55.01
Bra017948.1-P	Field mustard	endoplasmic reticulum	48.21	54.22
Solyc06g005940.2.1	Tomato	nucleus, plastid	48.04	53.91
Bra008311.1-P	Field mustard	endoplasmic reticulum	48.75	53.42
Solyc05g056400.2.1	Tomato	plastid	48.57	51.42
PGSC0003DMT400060279	Potato	cytosol	16.61	51.1
PGSC0003DMT400036388	Potato	endoplasmic reticulum	41.61	47.65
Solyc05g018700.2.1	Tomato	plastid	40.36	45.56
HORVU2Hr1G076360.1	Barley	endoplasmic reticulum	26.07	28.08
HORVU4Hr1G056730.1	Barley	endoplasmic reticulum	7.68	26.22
HORVU1Hr1G022810.1	Barley	endoplasmic reticulum	18.75	26.05
HORVU6Hr1G001700.1	Barley	endoplasmic reticulum, plastid	27.86	24.57
HORVU6Hr1G001640.1	Barley	endoplasmic reticulum	11.79	22.92
HORVU2Hr1G075810.1	Barley	endoplasmic reticulum	16.43	22.22
HORVU6Hr1G001800.2	Barley	endoplasmic reticulum	11.61	20.9
HORVU4Hr1G034020.1	Barley	cytosol	4.82	20.61
HORVU5Hr1G114600.1	Barley	endoplasmic reticulum	10.71	20.41
HORVU6Hr1G059710.1	Barley	endoplasmic reticulum	16.07	20.09
HORVU5Hr1G067570.1	Barley	plasma membrane	17.86	19.3
HORVU4Hr1G048980.2	Barley	cytosol	8.93	17.12
HORVU7Hr1G026030.1	Barley	cytosol	15.36	14.68

Protein Annotations

Gene3D:3.40.30.10	MapMan:50.5.3	UniProt:A0A287NWJ5	InterPro:Disulphide_isomerase	GO:GO:0000003	GO:GO:0003674
GO:GO:0003756	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005783	GO:GO:0005788	GO:GO:0007275	GO:GO:0008150	GO:GO:0009791	GO:GO:0009960
GO:GO:0009987	GO:GO:0016853	GO:GO:0019725	GO:GO:0034975	GO:GO:0045454	EnsemblPlantsGene:HORVU4Hr1G043910
EnsemblPlants:HORVU4Hr1G043910.1	InterPro:IPR013766	PFAM:PF00085	PFAM:PF13848	PRINTS:PR00421	ScanProsite:PS00194
PFscan:PS51352	PANTHER:PTHR18929	PANTHER:PTHR18929:SF186	InterPro:Prot_disulphide_isomerase	SUPFAM:SSF52833	TIGRFAMs:TIGR01126
TIGRFAMs:TIGR01130	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain	UniParc:UPI000B468AC6	SEG:seg

Description

Protein disulfide-isomerase [Source:UniProtKB/TrEMBL;Acc:A0A287NWJ5]

Coordinates

chrchr4H:+:350262817..350266613

Molecular Weight (calculated)

61556.9 Da

IEP (calculated)

5.336

GRAVY (calculated)

-0.297

Length

560 amino acids

Sequence
(BLAST)

001: PVDMVQSTVD RVHVGGSKPP SAPIKTRAAP RRRRVRPEKS HRSPSSAMAI SKVWISLLLA LAVVLSAPAA RAEEAAAAEE AAAPEAVLTL HADNFDDAIA
101: QHPFILVEFY APWCGHCKSL APEYEKAAQL LSKHDPAIVL AKVDANDEKN KPLAGKYEVQ GFPTLKIFRN GGKSIQEYKG PREAEGIVEY LKKQVGPASK
201: EIKAPEDATY LEDGKIHIVG VFTEFSGPEF TNFLEVAEKL RSDYDFGHTV HANHLPRGDA AVERPVVRLF KPFDELVVDS KDFDVSALEK FIDASSTPKV
301: VIFDKNPDNH PYLLKFFQSN APKAMLFLNF STGPFESFKS AYYGAVEEFS GKDVKFLIGD IESSQGAFQY FGLKVDQAPL ILIQDGDSKK FLKEHVEAGQ
401: IVAWLKDYFD GKLTPFRKSE PIPEANNEPV KVVVADNVHD VVFKSGKNVL IEFYAPWCGH CKKLAPILDE AAATLQSEED VVIAKMDATE NDVPGEFDVQ
501: GYPTLYFVTP SGKKVSYEGG RTADEIVDYI RKNKETAGQA AAATEKAAEP AATEPLKDEL

Best Arabidopsis Sequence Match ( AT1G21750.1 )
(BLAST)

001: MAMRGFTLFS ILVLSLCASS IRSEETETKE FVLTLDHTNF TDTINKHDFI VVEFYAPWCG HCKQLAPEYE KAASALSSNV PPVVLAKIDA SEETNREFAT
101: QYEVQGFPTI KIFRNGGKAV QEYNGPREAE GIVTYLKKQS GPASAEIKSA DDASEVVSDK KVVVVGIFPK LSGSEFDSFM AIAEKLRSEL DFAHTSDAKL
201: LPRGESSVTG PVVRLFKPFD EQFVDSKDFD GEALEKFVKE SSIPLITVFD KDPNNHPYVI KFFESTNTKA MLFINFTGEG AESLKSKYRE VATSNKGQGL
301: SFLLGDAENS QGAFQYFGLE ESQVPLIIIQ TADDKKYLKT NVEVDQIESW VKDFKDGKIA PHKKSQPIPA ENNEPVKVVV SDSLDDIVLN SGKNVLLEFY
401: APWCGHCQKL APILDEVAVS YQSDSSVVIA KLDATANDFP KDTFDVKGFP TIYFKSASGN VVVYEGDRTK EDFISFVDKN KDTVGEPKKE EETTEEVKDE
501: L

Arabidopsis Description

PDIL1-1Protein disulfide isomerase-like 1-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI01]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.