Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G048980.2 | Barley | cytosol | 82.44 | 36.99 |
| HORVU6Hr1G001640.1 | Barley | endoplasmic reticulum | 45.8 | 20.83 |
| HORVU6Hr1G001700.1 | Barley | endoplasmic reticulum, plastid | 90.84 | 18.74 |
| HORVU5Hr1G114600.1 | Barley | endoplasmic reticulum | 27.48 | 12.24 |
| HORVU6Hr1G001800.2 | Barley | endoplasmic reticulum | 25.19 | 10.61 |
| HORVU4Hr1G049820.1 | Barley | cytosol | 11.45 | 8.24 |
| HORVU7Hr1G026030.1 | Barley | cytosol | 29.77 | 6.66 |
| HORVU4Hr1G049880.2 | Barley | mitochondrion, plastid | 11.45 | 5.12 |
| HORVU2Hr1G075810.1 | Barley | endoplasmic reticulum | 16.03 | 5.07 |
| HORVU4Hr1G043910.1 | Barley | extracellular | 20.61 | 4.82 |
| HORVU6Hr1G059710.1 | Barley | endoplasmic reticulum | 13.74 | 4.02 |
| HORVU2Hr1G076360.1 | Barley | endoplasmic reticulum | 13.74 | 3.46 |
| HORVU5Hr1G067570.1 | Barley | plasma membrane | 4.58 | 1.16 |
| HORVU1Hr1G022810.1 | Barley | endoplasmic reticulum | 1.53 | 0.5 |
| HORVU4Hr1G056730.1 | Barley | endoplasmic reticulum | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G034020.1 | EnsemblPlantsGene:HORVU4Hr1G034020 | Gene3D:3.40.30.10 | InterPro:Thioredoxin-like_sf | PANTHER:PTHR18929 | PANTHER:PTHR18929:SF121 |
| PFAM:PF13848 | SUPFAM:SSF52833 | UniParc:UPI000B46DAFD | UniProt:A0A287NRR0 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chrchr4H:+:241643213..241643919
Molecular Weight (calculated)
14523.5 Da
IEP (calculated)
8.471
GRAVY (calculated)
-0.053
Length
131 amino acids
Sequence
(BLAST)
(BLAST)
001: HSDDLAAASR LEYTASFYQT TSPDVAKLFH IDPEAKRSSV VLLKKEEEKL TVFDGEFRVS AIAEFVSANK IPLITTLTQE TAPAIFDNPI KKQILLFVVA
101: KESSKFLPIL KETTKSFKGK VLCSVDRTSV S
101: KESSKFLPIL KETTKSFKGK VLCSVDRTSV S
001: MASSSTSISL LLFVSFILLL VNSRAENASS GSDLDEELAF LAAEESKEQS HGGGSYHEEE HDHQHRDFEN YDDLEQGGGE FHHGDHGYEE EPLPPVDEKD
101: VAVLTKDNFT EFVGNNSFAM VEFYAPWCGA CQALTPEYAA AATELKGLAA LAKIDATEEG DLAQKYEIQG FPTVFLFVDG EMRKTYEGER TKDGIVTWLK
201: KKASPSIHNI TTKEEAERVL SAEPKLVFGF LNSLVGSESE ELAAASRLED DLSFYQTASP DIAKLFEIET QVKRPALVLL KKEEEKLARF DGNFTKTAIA
301: EFVSANKVPL VINFTREGAS LIFESSVKNQ LILFAKANES EKHLPTLREV AKSFKGKFVF VYVQMDNEDY GEAVSGFFGV TGAAPKVLVY TGNEDMRKFI
401: LDGELTVNNI KTLAEDFLAD KLKPFYKSDP LPENNDGDVK VIVGNNFDEI VLDESKDVLL EIYAPWCGHC QSFEPIYNKL GKYLKGIDSL VVAKMDGTSN
501: EHPRAKVIKK KELRKSFW
101: VAVLTKDNFT EFVGNNSFAM VEFYAPWCGA CQALTPEYAA AATELKGLAA LAKIDATEEG DLAQKYEIQG FPTVFLFVDG EMRKTYEGER TKDGIVTWLK
201: KKASPSIHNI TTKEEAERVL SAEPKLVFGF LNSLVGSESE ELAAASRLED DLSFYQTASP DIAKLFEIET QVKRPALVLL KKEEEKLARF DGNFTKTAIA
301: EFVSANKVPL VINFTREGAS LIFESSVKNQ LILFAKANES EKHLPTLREV AKSFKGKFVF VYVQMDNEDY GEAVSGFFGV TGAAPKVLVY TGNEDMRKFI
401: LDGELTVNNI KTLAEDFLAD KLKPFYKSDP LPENNDGDVK VIVGNNFDEI VLDESKDVLL EIYAPWCGHC QSFEPIYNKL GKYLKGIDSL VVAKMDGTSN
501: EHPRAKVIKK KELRKSFW
Arabidopsis Description
PDIL1-3PDIL1-3 [Source:UniProtKB/TrEMBL;Acc:A0A178VF09]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.