Factsheet for Bra016405.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
endoplasmic reticulum 10
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	endoplasmic reticulum
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	endoplasmic reticulum

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra014057.1-P
Bra022418.1-P
Bra027469.1-P
Bra033657.1-P
Bra038206.1-P
Bra038208.1-P
Bra040749.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G21750.1	Bra014057.1-P	AT1G47128.1	18676877
AT1G21750.1	Bra040749.1-P	AT1G47128.1	18676877
AT1G21750.1	Bra022418.1-P	AT3G19390.1	18676877
AT1G21750.1	Bra038206.1-P	AT3G19390.1	18676877
AT1G21750.1	Bra038208.1-P	AT3G19390.1	18676877
AT1G21750.1	Bra027469.1-P	AT5G42980.1	15352244
AT1G21750.1	Bra033657.1-P	AT5G43060.1	18676877

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96575	Canola	endoplasmic reticulum	99.4	99.4
Bra012293.1-P	Field mustard	endoplasmic reticulum	90.22	91.13
AT1G21750.1	Thale cress	endoplasmic reticulum	90.02	90.02
Bra017948.1-P	Field mustard	endoplasmic reticulum	84.43	84.94
Bra015665.1-P	Field mustard	endoplasmic reticulum	77.25	76.03
Bra008311.1-P	Field mustard	endoplasmic reticulum	74.65	73.19
PGSC0003DMT400010624	Potato	endoplasmic reticulum	61.88	62.75
GSMUA_Achr1P16970_001	Banana	endoplasmic reticulum	61.28	60.55
Os11t0199200-01	Rice	extracellular, plasma membrane	59.68	58.4
TraesCS4B01G101800.3	Wheat	golgi	58.88	57.62
TraesCS4A01G214200.2	Wheat	plastid	59.08	57.48
TraesCS4D01G098400.1	Wheat	golgi	58.88	57.28
Solyc05g056400.2.1	Tomato	plastid	60.48	57.28
KXG28001	Sorghum	endoplasmic reticulum	57.88	56.31
GSMUA_Achr3P22070_001	Banana	endoplasmic reticulum	57.48	56.03
Zm00001d028108_P001	Maize	mitochondrion	15.57	55.71
Solyc06g005940.2.1	Tomato	nucleus, plastid	55.49	55.71
PGSC0003DMT400060279	Potato	cytosol	20.16	55.49
HORVU4Hr1G049820.1	Barley	cytosol	20.16	55.49
KXG26345	Sorghum	endoplasmic reticulum	55.89	54.05
Zm00001d007301_P001	Maize	endoplasmic reticulum	57.88	52.82
HORVU4Hr1G043910.1	Barley	extracellular	58.88	52.68
Os02t0554900-01	Rice	plastid	56.69	52.11
Os04t0436300-01	Rice	endoplasmic reticulum	30.34	51.88
TraesCS2B01G323200.1	Wheat	endoplasmic reticulum	52.89	51.16
TraesCS2A01G306500.1	Wheat	endoplasmic reticulum	52.69	51.06
TraesCS2D01G305000.1	Wheat	endoplasmic reticulum	52.3	50.68
Zm00001d049099_P005	Maize	endoplasmic reticulum	53.69	50.56
HORVU4Hr1G049880.2	Barley	mitochondrion, plastid	24.75	42.32
Zm00001d016017_P002	Maize	cytosol	19.96	39.22
Zm00001d035557_P001	Maize	mitochondrion	24.75	36.15
Zm00001d041417_P001	Maize	endoplasmic reticulum	15.37	34.84
Bra002464.1-P	Field mustard	endoplasmic reticulum	35.53	29.87
Bra020239.1-P	Field mustard	endoplasmic reticulum	34.93	29.76
HORVU2Hr1G076360.1	Barley	endoplasmic reticulum	28.94	27.88
Bra007120.1-P	Field mustard	endoplasmic reticulum	31.94	27.63
Bra004455.1-P	Field mustard	endoplasmic reticulum	19.56	27.15
Bra014319.1-P	Field mustard	endoplasmic reticulum	21.76	26.39
Bra000454.1-P	Field mustard	endoplasmic reticulum	18.76	25.97
Bra018672.1-P	Field mustard	endoplasmic reticulum	7.39	25.69
Bra018958.1-P	Field mustard	endoplasmic reticulum	26.75	25.33
Bra034408.1-P	Field mustard	endoplasmic reticulum	20.56	23.68
Bra015375.1-P	Field mustard	endoplasmic reticulum	18.96	21.99
Bra005546.1-P	Field mustard	endoplasmic reticulum	19.16	21.67

Protein Annotations

Gene3D:3.40.30.10	MapMan:50.5.3	EnsemblPlantsGene:Bra016405	EnsemblPlants:Bra016405.1	EnsemblPlants:Bra016405.1-P	InterPro:Disulphide_isomerase
GO:GO:0003674	GO:GO:0003756	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0008150	GO:GO:0009987	GO:GO:0016853	GO:GO:0019725
GO:GO:0045454	InterPro:IPR013766	UniProt:M4DIS8	PFAM:PF00085	PFAM:PF13848	PRINTS:PR00421
ScanProsite:PS00194	PFscan:PS51352	PANTHER:PTHR18929	PANTHER:PTHR18929:SF186	InterPro:Prot_disulphide_isomerase	SUPFAM:SSF52833
SignalP:SignalP-noTM	TIGRFAMs:TIGR01126	TIGRFAMs:TIGR01130	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain
UniParc:UPI00025467AD	SEG:seg	:	:	:	:

Description

AT1G21750 (E=1e-255) ATPDIL1-1, ATPDI5, PDI5 | ATPDIL1-1 (PDI-LIKE 1-1); protein disulfide isomerase

Coordinates

chrA08:-:18298518..18301132

Molecular Weight (calculated)

55779.6 Da

IEP (calculated)

4.559

GRAVY (calculated)

-0.322

Length

501 amino acids

Sequence
(BLAST)

001: MAMRGYALFS ILALSLLASS VRSEETATET TKEFVLTLDH TNFTDTVNKH DFIVVEFYAP WCGHCKQLAP EYEKAASELS SHVPPVVLAK IDASEETNRE
101: FATQYEVQGF PTIKIFRNGG KAVQEYNGPR EADGIVTYLK KQSGPASFEI KAAEDASEFD KKVIVVGVFP KLSGSEFDSF LATAEKLRSD YDFAHTSDAK
201: LLPRGESVTG PVVRLFKPFD ELFVDSKDFD GEALEKFVKE SSIPLITVFD KDPNNHPYVI KFFDSSNTKA MLFINFTGEG AESLKSKYRE VATSYKGQGL
301: SFLLGDAENS QGAFQYFGLE ESQVPLIIIQ TVDDKKYLKT NIEIDQIESW VKDFKDGKVA PHKKSQPIPT ENNEPVKVVV AESLDEMVFN SGKNVLLEFY
401: APWCGHCQKL VPILDEVAVS YQSDPSVVIA KLDATANDFP NDTFDVKGFP TIYLRSASGN IVLYDGDRTK EDIISFIDKN KDTAGEPKKE ETTTEAVKDE
501: L

Best Arabidopsis Sequence Match ( AT1G21750.1 )
(BLAST)

001: MAMRGFTLFS ILVLSLCASS IRSEETETKE FVLTLDHTNF TDTINKHDFI VVEFYAPWCG HCKQLAPEYE KAASALSSNV PPVVLAKIDA SEETNREFAT
101: QYEVQGFPTI KIFRNGGKAV QEYNGPREAE GIVTYLKKQS GPASAEIKSA DDASEVVSDK KVVVVGIFPK LSGSEFDSFM AIAEKLRSEL DFAHTSDAKL
201: LPRGESSVTG PVVRLFKPFD EQFVDSKDFD GEALEKFVKE SSIPLITVFD KDPNNHPYVI KFFESTNTKA MLFINFTGEG AESLKSKYRE VATSNKGQGL
301: SFLLGDAENS QGAFQYFGLE ESQVPLIIIQ TADDKKYLKT NVEVDQIESW VKDFKDGKIA PHKKSQPIPA ENNEPVKVVV SDSLDDIVLN SGKNVLLEFY
401: APWCGHCQKL APILDEVAVS YQSDSSVVIA KLDATANDFP KDTFDVKGFP TIYFKSASGN VVVYEGDRTK EDFISFVDKN KDTVGEPKKE EETTEEVKDE
501: L

Arabidopsis Description

PDIL1-1Protein disulfide isomerase-like 1-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI01]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.