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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • plastid 1
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
EpiLoc:plastid
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra000144.1-P
Bra000267.1-P
Bra000451.1-P
Bra001707.1-P
Bra002660.1-P
Bra003221.1-P
Bra003426.1-P
Bra003499.1-P
Bra004012.1-P
Bra004134.1-P
Bra004459.1-P
Bra004709.1-P
Bra005019.1-P
Bra005526.1-P
Bra006772.1-P
Bra006960.1-P
Bra006963.1-P
Bra007192.1-P
Bra007555.1-P
Bra007678.1-P
Bra009244.1-P
Bra012083.1-P
Bra012293.1-P
Bra012371.1-P
Bra012532.1-P
Bra012962.1-P
Bra012963.1-P
Bra013423.1-P
Bra013865.1-P
Bra014005.1-P
Bra014473.1-P
Bra014720.1-P
Bra015023.1-P
Bra015227.1-P
Bra015314.1-P
Bra016353.1-P
Bra016405.1-P
Bra016607.1-P
Bra016676.1-P
Bra017055.1-P
Bra017948.1-P
Bra018415.1-P
Bra018568.1-P
Bra019637.1-P
Bra019639.1-P
Bra020374.1-P
Bra020523.1-P
Bra020549.1-P
Bra021396.1-P
Bra022325.1-P
Bra023235.1-P
Bra023485.1-P
Bra023579.1-P
Bra023838.1-P
Bra024580.1-P
Bra024839.1-P
Bra024840.1-P
Bra025984.1-P
Bra026675.1-P
Bra027109.1-P
Bra028367.1-P
Bra028543.1-P
Bra029310.1-P
Bra030569.1-P
Bra030768.1-P
Bra031471.1-P
Bra031813.1-P
Bra032343.1-P
Bra033505.1-P
Bra033613.1-P
Bra033861.1-P
Bra035392.1-P
Bra035529.1-P
Bra037164.1-P
Bra037580.1-P
Bra037701.1-P
Bra038094.1-P
Bra038201.1-P
Bra038863.1-P
Bra039705.1-P
Bra039746.1-P
Bra039823.1-P
Bra039825.1-P
Bra039844.1-P
Bra040120.1-P
Bra040406.1-P
Bra040469.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G42980.1 Bra015314.1-P AT1G04410.1 15352244
AT5G42980.1 Bra030569.1-P AT1G04410.1 15352244
AT5G42980.1 Bra018568.1-P AT1G09310.1 15352244
AT5G42980.1 Bra030768.1-P AT1G09310.1 15352244
AT5G42980.1 Bra018415.1-P AT1G10960.1 15352244
AT5G42980.1 Bra016607.1-P AT1G17290.1 15352244
AT5G42980.1 Bra025984.1-P AT1G17290.1 15352244
AT5G42980.1 Bra026675.1-P AT1G17290.1 15352244
AT5G42980.1 Bra012293.1-P AT1G21750.1 15352244
AT5G42980.1 Bra016405.1-P AT1G21750.1 15352244
AT5G42980.1 Bra017948.1-P AT1G21750.1 15352244
AT5G42980.1 Bra012371.1-P AT1G23310.1 15352244
AT5G42980.1 Bra016353.1-P AT1G23310.1 15352244
AT5G42980.1 Bra024580.1-P AT1G23310.1 15352244
AT5G42980.1 Bra023235.1-P AT1G32060.1 15352244
AT5G42980.1 Bra033861.1-P AT1G32060.1 15352244
AT5G42980.1 Bra005526.1-P AT1G43670.1 15352244
AT5G42980.1 Bra014005.1-P AT1G43670.1 15352244
AT5G42980.1 Bra027109.1-P AT1G60950.1 15352244
AT5G42980.1 Bra031471.1-P AT1G60950.1 15352244
AT5G42980.1 Bra040469.1-P AT1G60950.1 15352244
AT5G42980.1 Bra004134.1-P AT1G65930.1 15352244
AT5G42980.1 Bra038201.1-P AT1G65930.1 15352244
AT5G42980.1 Bra039746.1-P AT1G65930.1 15352244
AT5G42980.1 Bra024839.1-P AT2G01950.1 19000166
AT5G42980.1 Bra024840.1-P AT2G01950.1 19000166
AT5G42980.1 Bra015227.1-P AT2G15620.1 15352244
AT5G42980.1 Bra039844.1-P AT2G15620.1 15352244
AT5G42980.1 Bra000144.1-P AT2G39730.1 15352244
AT5G42980.1 Bra005019.1-P AT2G39730.1 15352244
AT5G42980.1 Bra017055.1-P AT2G39730.1 15352244
AT5G42980.1 Bra000267.1-P AT2G42580.1 19000166
AT5G42980.1 Bra004709.1-P AT2G42580.1 19000166
AT5G42980.1 Bra037701.1-P AT2G43560.1 15352244
AT5G42980.1 Bra000451.1-P AT2G47400.1 15352244
AT5G42980.1 Bra004459.1-P AT2G47400.1 15352244
AT5G42980.1 Bra021396.1-P AT2G47400.1 15352244
AT5G42980.1 Bra040120.1-P AT3G04790.1 15352244
AT5G42980.1 Bra040406.1-P AT3G04790.1 15352244
AT5G42980.1 Bra001707.1-P AT3G18490.1 15352244
AT5G42980.1 Bra022325.1-P AT3G18490.1 15352244
AT5G42980.1 Bra037580.1-P AT3G18490.1 15352244
AT5G42980.1 Bra015023.1-P AT3G23940.1 15352244
AT5G42980.1 Bra028367.1-P AT3G23940.1 15352244
AT5G42980.1 Bra038863.1-P AT3G50820.1 15352244
AT5G42980.1 Bra006960.1-P AT3G52930.1 15352244
AT5G42980.1 Bra019639.1-P AT3G52930.1 15352244
AT5G42980.1 Bra028543.1-P AT3G52930.1 15352244
AT5G42980.1 Bra006963.1-P AT3G52960.1 15352244
AT5G42980.1 Bra019637.1-P AT3G52960.1 15352244
AT5G42980.1 Bra003221.1-P AT3G55800.1 15352244
AT5G42980.1 Bra007192.1-P AT3G55800.1 15352244
AT5G42980.1 Bra014720.1-P AT3G55800.1 15352244
AT5G42980.1 Bra003426.1-P AT3G60750.1 15352244
AT5G42980.1 Bra007555.1-P AT3G60750.1 15352244
AT5G42980.1 Bra014473.1-P AT3G60750.1 15352244
AT5G42980.1 Bra003499.1-P AT3G62410.1 15352244
AT5G42980.1 Bra007678.1-P AT3G62410.1 15352244
AT5G42980.1 Bra033505.1-P AT4G15730.1 21798944
AT5G42980.1 Bra012532.1-P AT4G19700.1 21798944
AT5G42980.1 Bra013423.1-P AT4G19700.1 21798944
AT5G42980.1 Bra013865.1-P AT4G25130.1 15352244
AT5G42980.1 Bra033613.1-P AT4G39330.1 15352244
AT5G42980.1 Bra023485.1-P AT5G14740.1 15352244
AT5G42980.1 Bra023579.1-P AT5G16710.1 15352244
AT5G42980.1 Bra004012.1-P AT5G26000.1 15352244
AT5G42980.1 Bra016676.1-P AT5G26000.1 15352244
AT5G42980.1 Bra020523.1-P AT5G26000.1 15352244
AT5G42980.1 Bra020549.1-P AT5G26000.1 15352244
AT5G42980.1 Bra023838.1-P AT5G26000.1 15352244
AT5G42980.1 Bra032343.1-P AT5G26000.1 15352244
AT5G42980.1 Bra038094.1-P AT5G26000.1 15352244
AT5G42980.1 Bra039705.1-P AT5G26000.1 15352244
AT5G42980.1 Bra039823.1-P AT5G26000.1 15352244
AT5G42980.1 Bra039825.1-P AT5G26000.1 15352244
AT5G42980.1 Bra035392.1-P AT5G35630.1 15352244
AT5G42980.1 Bra035529.1-P AT5G35630.1 15352244
AT5G42980.1 Bra002660.1-P AT5G58330.1 15352244
AT5G42980.1 Bra006772.1-P AT5G58330.1 15352244
AT5G42980.1 Bra020374.1-P AT5G58330.1 15352244
AT5G42980.1 Bra009244.1-P AT5G61410.1 15352244
AT5G42980.1 Bra012962.1-P AT5G61410.1 15352244
AT5G42980.1 Bra012963.1-P AT5G61410.1 15352244
AT5G42980.1 Bra029310.1-P AT5G61410.1 15352244
AT5G42980.1 Bra012083.1-P AT5G66570.1 15352244
AT5G42980.1 Bra031813.1-P AT5G66570.1 15352244
AT5G42980.1 Bra037164.1-P AT5G66570.1 15352244
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY32970 Canola cytosol 100.0 100.0
CDY43592 Canola cytosol 98.37 98.37
AT5G42980.1 Thale cress cytosol 73.98 77.12
Bra036335.1-P Field mustard cytosol 64.23 67.52
Bra014037.1-P Field mustard cytosol 63.41 66.1
Bra025762.1-P Field mustard cytosol 58.54 60.5
TraesCS1D01G327500.1 Wheat cytosol, plastid 54.47 56.3
TraesCS1B01G339000.1 Wheat cytosol 53.66 55.93
Bra012872.1-P Field mustard cytosol 50.41 54.39
Bra036839.1-P Field mustard cytosol 50.41 54.39
HORVU1Hr1G075560.1 Barley cytosol 52.03 52.46
OQU78269 Sorghum cytosol 52.85 51.59
TraesCS1B01G338800.1 Wheat cytosol, golgi, plastid, unclear 52.85 51.18
Zm00001d038652_P003 Maize cytosol 52.03 50.0
TraesCS1A01G325600.1 Wheat cytosol 52.85 50.0
TraesCS7A01G562100.1 Wheat cytosol 39.02 45.28
TraesCS7D01G001000.1 Wheat cytosol 38.21 41.59
Bra040318.1-P Field mustard cytosol 43.09 40.77
Bra028445.1-P Field mustard cytosol 43.09 39.85
Bra017898.1-P Field mustard cytosol 35.77 34.38
Bra027837.1-P Field mustard cytosol 35.77 34.38
Bra031769.1-P Field mustard cytosol 34.15 33.33
Bra003976.1-P Field mustard cytosol 37.4 32.62
Bra003977.1-P Field mustard cytosol 37.4 30.87
Bra040055.1-P Field mustard cytosol 34.15 30.66
Bra007245.1-P Field mustard plastid 34.15 30.0
Bra014691.1-P Field mustard cytosol, mitochondrion 32.52 29.85
Bra016258.1-P Field mustard cytosol 36.59 29.8
Bra001346.1-P Field mustard cytosol 34.96 26.22
Bra021417.1-P Field mustard plastid 29.27 19.78
Bra023564.1-P Field mustard plastid 29.27 19.25
Bra040596.1-P Field mustard plastid 26.02 17.68
Protein Annotations
MapMan:10.6.1MapMan:18.7.2Gene3D:3.40.30.10EnsemblPlantsGene:Bra027469EnsemblPlants:Bra027469.1EnsemblPlants:Bra027469.1-P
GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005618GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005739GO:GO:0005773GO:GO:0005794GO:GO:0005829GO:GO:0005886
GO:GO:0006457GO:GO:0006662GO:GO:0006950GO:GO:0008150GO:GO:0008152GO:GO:0009408
GO:GO:0009506GO:GO:0009507GO:GO:0009536GO:GO:0009570GO:GO:0009605GO:GO:0009607
GO:GO:0009628GO:GO:0009719GO:GO:0009735GO:GO:0009987GO:GO:0010188GO:GO:0010286
GO:GO:0015035GO:GO:0016020GO:GO:0016043GO:GO:0016671GO:GO:0019725GO:GO:0030312
GO:GO:0045454GO:GO:0050832GO:GO:0051259GO:GO:0055114InterPro:IPR013766UniProt:M4EFA7
PFAM:PF00085PIRSF:PIRSF000077PRINTS:PR00421ScanProsite:PS00194PFscan:PS51352PANTHER:PTHR10438
PANTHER:PTHR10438:SF293SUPFAM:SSF52833InterPro:ThioredoxinInterPro:Thioredoxin-like_sfInterPro:Thioredoxin_CSInterPro:Thioredoxin_domain
UniParc:UPI0000136E02:::::
Description
AT5G42980 (E=6e-046) ATTRX3, ATH3, ATTRXH3, TRXH3 | ATTRX3 (THIOREDOXIN 3); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor
Coordinates
chrA09:-:14099559..14100218
Molecular Weight (calculated)
13587.6 Da
IEP (calculated)
5.233
GRAVY (calculated)
0.208
Length
123 amino acids
Sequence
(BLAST)
001: MAATAELIPA GEVIACHTVE DWNNKLKAAK ESNKLIVIDF TAVWCPPCRF IAPIFVELAK KHLDVVFFKV DVDELATVAK EFDVQAMPTF VYMKGEEKLD
101: KVVGAAKEEI EAKLLKHSQV AAA
Best Arabidopsis Sequence Match ( AT5G42980.1 )
(BLAST)
001: MAAEGEVIAC HTVEDWTEKL KAANESKKLI VIDFTATWCP PCRFIAPVFA DLAKKHLDVV FFKVDVDELN TVAEEFKVQA MPTFIFMKEG EIKETVVGAA
101: KEEIIANLEK HKTVVAAA
Arabidopsis Description
TRX3Thioredoxin H3 [Source:UniProtKB/Swiss-Prot;Acc:Q42403]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.