Factsheet for Bra023579.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra027469.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G16710.1	Bra027469.1-P	AT5G42980.1	15352244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX85490	Canola	mitochondrion	100.0	71.21
AT5G16710.1	Thale cress	plastid	84.7	60.08
KRH30940	Soybean	nucleus	74.86	52.9
KRG97934	Soybean	nucleus	75.41	52.87
Bra025749.1-P	Field mustard	cytosol	61.2	52.58
KXG19661	Sorghum	plastid	74.86	52.29
Os06t0232600-01	Rice	extracellular, plasma membrane	76.5	51.47
Zm00001d037240_P001	Maize	plastid	75.41	51.3
PGSC0003DMT400040588	Potato	cytosol, plastid	74.86	51.12
Solyc11g011250.1.1	Tomato	plastid	74.86	51.12
Bra008188.1-P	Field mustard	cytosol	59.56	50.93
Bra016503.1-P	Field mustard	cytosol	57.38	50.0
Bra035356.1-P	Field mustard	cytosol	27.32	49.02
TraesCS7B01G095600.2	Wheat	plastid	69.4	48.29
TraesCS7D01G191700.1	Wheat	plastid	68.85	47.91
TraesCS7A01G190700.1	Wheat	plastid	68.31	47.53
VIT_14s0006g00630.t01	Wine grape	plastid	67.76	42.91
GSMUA_Achr7P18780_001	Banana	mitochondrion	72.13	40.74
HORVU7Hr1G038770.22	Barley	mitochondrion	69.4	39.56
Bra020633.1-P	Field mustard	cytosol, mitochondrion	12.57	6.57

Protein Annotations

Gene3D:1.20.1050.10	MapMan:10.4.1.3	Gene3D:3.40.30.10	EnsemblPlantsGene:Bra023579	EnsemblPlants:Bra023579.1	EnsemblPlants:Bra023579.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507
GO:GO:0009536	GO:GO:0009570	GO:GO:0009719	GO:GO:0009735	GO:GO:0009941	GO:GO:0009987
GO:GO:0010731	GO:GO:0019538	GO:GO:0045174	GO:GO:0098869	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf
InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	UniProt:M4E476	PFAM:PF13410	PFAM:PF13417
PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR44420	PANTHER:PTHR44420:SF1	SUPFAM:SSF47616	SUPFAM:SSF52833
InterPro:Thioredoxin-like_sf	UniParc:UPI0002543052	:	:	:	:

Description

AT5G16710 (E=7e-091) DHAR3 | DHAR3 (dehydroascorbate reductase 1); glutathione dehydrogenase (ascorbate)

Coordinates

chrA02:+:4035773..4036800

Molecular Weight (calculated)

20736.8 Da

IEP (calculated)

5.703

GRAVY (calculated)

-0.429

Length

183 amino acids

Sequence
(BLAST)

001: MEEKHVPYDM KLVDLINKPE WFLKISPEGK VPLVKFNEKW VLDSNVITQS LEEKYPEPPL TTPPEKASVG SKIFSTFIGF LKSKDQGDGT EQALLNELST
101: FNDYLKENGP FINGEKISAV DLSLGPKLHH MKIALGHYKD WSVPDSLSFL KSYMENVFSR ESFSKTQAQA EDVIAGWRPK VMA

Best Arabidopsis Sequence Match ( AT5G16710.1 )
(BLAST)

001: MISLRFQPST TAGVLSASVS RAGFIKRCGS TKPGRVGRFV TMATAASPLE ICVKASITTP NKLGDCPFCQ KVLLTMEEKN VPYDMKMVDL SNKPEWFLKI
101: SPEGKVPVVK FDEKWVPDSD VITQALEEKY PEPPLATPPE KASVGSKIFS TFVGFLKSKD SGDGTEQVLL DELTTFNDYI KDNGPFINGE KISAADLSLA
201: PKLYHMKIAL GHYKNWSVPD SLPFVKSYME NVFSRESFTN TRAETEDVIA GWRPKVMG

Arabidopsis Description

DHAR3DHAR3 [Source:UniProtKB/TrEMBL;Acc:A0A178UIL9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.