Factsheet for Bra025749.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra005641.1-P
Bra021743.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G19570.1	Bra005641.1-P	AT2G31790.1	21798944
AT1G19570.1	Bra021743.1-P	AT2G31790.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29420	Canola	cytosol	100.0	100.0
CDY39369	Canola	cytosol	99.53	99.53
AT1G19570.1	Thale cress	cytosol	84.51	84.51
Bra016503.1-P	Field mustard	cytosol	80.28	81.43
Bra008188.1-P	Field mustard	cytosol	77.46	77.1
Solyc05g054760.2.1	Tomato	extracellular	73.71	74.76
PGSC0003DMT400060193	Potato	cytosol	73.71	74.76
KRG92962	Soybean	mitochondrion	74.65	74.65
AT1G19550.1	Thale cress	cytosol	53.52	74.51
KRH36212	Soybean	cytosol, mitochondrion, nucleus	72.77	72.77
VIT_00s0317g00050.t01	Wine grape	cytosol	71.83	72.17
Os05t0116100-01	Rice	extracellular	68.08	68.08
EES18912	Sorghum	cytosol	66.67	66.36
GSMUA_Achr6P34340_001	Banana	cytosol	67.61	65.45
GSMUA_Achr11P...	Banana	cytosol, unclear	66.67	65.14
Zm00001d035595_P003	Maize	cytosol	64.32	63.72
Zm00001d011034_P004	Maize	cytosol	64.32	63.72
Bra023579.1-P	Field mustard	cytosol	52.58	61.2
TraesCS1B01G059100.1	Wheat	cytosol	67.61	60.0
Bra035356.1-P	Field mustard	cytosol	28.64	59.8
VIT_00s0317g00040.t01	Wine grape	vacuole	11.27	58.54
Solyc11g039930.1.1	Tomato	cytosol	25.35	56.84
Zm00001d011035_P001	Maize	endoplasmic reticulum	65.26	52.45
Solyc06g075520.2.1	Tomato	cytosol	26.76	51.82
GSMUA_Achr11P...	Banana	plastid	65.26	50.18
Solyc05g013950.1.1	Tomato	plastid	32.86	49.65
OQU77257	Sorghum	plastid	66.2	48.62
Solyc09g056180.2.1	Tomato	cytosol	23.47	48.54
HORVU1Hr1G008120.1	Barley	extracellular	68.08	47.08
TraesCS1A01G045700.1	Wheat	golgi	68.08	46.62
Bra020633.1-P	Field mustard	cytosol, mitochondrion	16.9	10.29

Protein Annotations

Gene3D:1.20.1050.10	MapMan:10.4.1.3	Gene3D:3.40.30.10	ProteinID:AAQ01573	ProteinID:AAQ01573.1	EMBL:AY337009
EnsemblPlantsGene:Bra025749	EnsemblPlants:Bra025749.1	EnsemblPlants:Bra025749.1-P	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	UniProt:M4EAE1
PFAM:PF13410	PFAM:PF13417	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR44420	PANTHER:PTHR44420:SF2
SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI000253EE7F	SEG:seg	:

Description

AT1G19570 (E=1e-097) DHAR1, ATDHAR1 | DHAR1 (dehydroascorbate reductase); copper ion binding / glutathione dehydrogenase (ascorbate)

Coordinates

chrA06:-:7698580..7699406

Molecular Weight (calculated)

23549.2 Da

IEP (calculated)

6.091

GRAVY (calculated)

-0.203

Length

213 amino acids

Sequence
(BLAST)

001: MALEVCVKAA VGAPDALGDC PFSQRVLLTL EEKNLPYKMH LINISDKPQW FLAISPEGKV PVLKNDDKWV SDSDVITGIL EEKYPEPSLK TPPEFASVGS
101: KIFGTFVTFL KSKDSSDGSE KALLDELEAL ETHLKTHDGP FIAGGKVSAV DLSLAPKLYH LKVALGHYKS WSVPESLPHV HGYMKALFSL DSFEKTKTEE
201: RYVIAGWEHK VNP

Best Arabidopsis Sequence Match ( AT1G19570.1 )
(BLAST)

001: MALEICVKAA VGAPDHLGDC PFSQRALLTL EEKSLTYKIH LINLSDKPQW FLDISPQGKV PVLKIDDKWV TDSDVIVGIL EEKYPDPPLK TPAEFASVGS
101: NIFGTFGTFL KSKDSNDGSE HALLVELEAL ENHLKSHDGP FIAGERVSAV DLSLAPKLYH LQVALGHFKS WSVPESFPHV HNYMKTLFSL DSFEKTKTEE
201: KYVISGWAPK VNP

Arabidopsis Description

DHAR1Glutathione S-transferase DHAR1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FWR4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.