Factsheet for VIT_00s0317g00040.t01

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 4
plasma membrane 3
golgi 3
cytosol 2
plastid 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus, plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_05s0094g01000.t01
VIT_05s0094g01020.t01
VIT_05s0094g01030.t01
VIT_05s0094g01040.t01
VIT_05s0094g01050.t01
VIT_05s0094g01060.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G19570.1	VIT_05s0094g01000.t01	AT2G31790.1	21798944
AT1G19570.1	VIT_05s0094g01020.t01	AT2G31790.1	21798944
AT1G19570.1	VIT_05s0094g01030.t01	AT2G31790.1	21798944
AT1G19570.1	VIT_05s0094g01040.t01	AT2G31790.1	21798944
AT1G19570.1	VIT_05s0094g01050.t01	AT2G31790.1	21798944
AT1G19570.1	VIT_05s0094g01060.t01	AT2G31790.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37653	Canola	cytosol	58.54	39.34
CDX96659	Canola	cytosol	58.54	12.7
CDX83759	Canola	cytosol	58.54	12.44
Solyc05g054760.2.1	Tomato	extracellular	60.98	11.9
PGSC0003DMT400060193	Potato	cytosol	58.54	11.43
Bra016503.1-P	Field mustard	cytosol	58.54	11.43
AT1G19570.1	Thale cress	cytosol	58.54	11.27
CDY39369	Canola	cytosol	58.54	11.27
CDY29420	Canola	cytosol	58.54	11.27
Bra025749.1-P	Field mustard	cytosol	58.54	11.27
VIT_00s0317g00050.t01	Wine grape	cytosol	56.1	10.85
AT1G75270.1	Thale cress	cytosol	53.66	10.33
Os05t0116100-01	Rice	extracellular	53.66	10.33
KRH36212	Soybean	cytosol, mitochondrion, nucleus	53.66	10.33
KRG92962	Soybean	mitochondrion	53.66	10.33
Bra008188.1-P	Field mustard	cytosol	53.66	10.28
CDY62535	Canola	cytosol	53.66	10.28
CDY37249	Canola	cytosol	51.22	9.81
GSMUA_Achr6P34340_001	Banana	cytosol	51.22	9.55
EES18912	Sorghum	cytosol	48.78	9.35
Zm00001d011034_P004	Maize	cytosol	48.78	9.3
GSMUA_Achr11P...	Banana	cytosol, unclear	48.78	9.17
Zm00001d035595_P003	Maize	cytosol	46.34	8.84
Zm00001d011035_P001	Maize	endoplasmic reticulum	51.22	7.92
TraesCS1B01G059100.1	Wheat	cytosol	46.34	7.92
GSMUA_Achr11P...	Banana	plastid	51.22	7.58
VIT_14s0006g00630.t01	Wine grape	plastid	51.22	7.27
OQU77257	Sorghum	plastid	51.22	7.24
HORVU1Hr1G008120.1	Barley	extracellular	46.34	6.17
TraesCS1A01G045700.1	Wheat	golgi	46.34	6.11
Bra035356.1-P	Field mustard	cytosol	9.76	3.92
AT1G19550.1	Thale cress	cytosol	4.88	1.31
Solyc05g013950.1.1	Tomato	plastid	2.44	0.71
Solyc11g039930.1.1	Tomato	cytosol	0.0	0.0
Solyc09g056180.2.1	Tomato	cytosol	0.0	0.0
Solyc06g075520.2.1	Tomato	cytosol	0.0	0.0
CDY65006	Canola	extracellular	0.0	0.0

Protein Annotations

ArrayExpress:VIT_00s0317g00040	EMBL:FN596030	EnsemblPlants:VIT_00s0317g00040.t01	EnsemblPlantsGene:VIT_00s0317g00040	Gene3D:3.40.30.10	ProteinID:CBI33168
ProteinID:CBI33168.3	UniParc:UPI0001BE3D59	UniProt:D7TRP2	MapMan:35.2	:	:

Description

No Description!

Coordinates

chrUn:-:23007798..23008010

Molecular Weight (calculated)

4495.5 Da

IEP (calculated)

3.815

GRAVY (calculated)

0.507

Length

41 amino acids

Sequence
(BLAST)

1: MVWELCVKAA AGAPDLLGDC PFSQGILMTL DEEHFQGLWV C

Best Arabidopsis Sequence Match ( AT1G75270.1 )
(BLAST)

001: MALDICVKVA VGAPDVLGDC PFSQRVLLTL EEKKLPYKTH LINVSDKPQW FLDISPEGKV PVVKLDGKWV ADSDVIVGLL EEKYPEPSLK TPPEFASVGS
101: KIFGAFVTFL KSKDANDGSE KALVDELEAL ENHLKTHSGP FVAGEKITAV DLSLAPKLYH LEVALGHYKN WSVPESLTSV RNYAKALFSR ESFENTKAKK
201: EIVVAGWESK VNA

Arabidopsis Description

DHAR2Glutathione S-transferase DHAR2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FRL8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.