Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| PGSC0003DMT400075461 | |
| PGSC0003DMT400075463 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G19570.1 | PGSC0003DMT400075461 | AT2G31790.1 | 21798944 |
| AT1G19570.1 | PGSC0003DMT400075463 | AT2G31790.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc05g054760.2.1 | Tomato | extracellular | 98.1 | 98.1 |
| KRG92962 | Soybean | mitochondrion | 75.71 | 74.65 |
| CDX96659 | Canola | cytosol | 66.67 | 74.07 |
| Bra025749.1-P | Field mustard | cytosol | 74.76 | 73.71 |
| CDY29420 | Canola | cytosol | 74.76 | 73.71 |
| CDX83759 | Canola | cytosol | 67.62 | 73.58 |
| Bra016503.1-P | Field mustard | cytosol | 73.33 | 73.33 |
| KRH36212 | Soybean | cytosol, mitochondrion, nucleus | 74.29 | 73.24 |
| CDY39369 | Canola | cytosol | 74.29 | 73.24 |
| AT1G19570.1 | Thale cress | cytosol | 72.86 | 71.83 |
| Solyc11g039930.1.1 | Tomato | cytosol | 32.38 | 71.58 |
| AT1G75270.1 | Thale cress | cytosol | 71.43 | 70.42 |
| CDY62535 | Canola | cytosol | 69.52 | 68.22 |
| Bra008188.1-P | Field mustard | cytosol | 69.52 | 68.22 |
| Os05t0116100-01 | Rice | extracellular | 68.57 | 67.61 |
| CDY37249 | Canola | cytosol | 68.57 | 67.29 |
| CDY37653 | Canola | cytosol | 19.52 | 67.21 |
| Solyc06g075520.2.1 | Tomato | cytosol | 34.76 | 66.36 |
| EES18912 | Sorghum | cytosol | 67.62 | 66.36 |
| GSMUA_Achr11P... | Banana | cytosol, unclear | 68.57 | 66.06 |
| Solyc09g056180.2.1 | Tomato | cytosol | 31.9 | 65.05 |
| GSMUA_Achr6P34340_001 | Banana | cytosol | 68.1 | 65.0 |
| Zm00001d011034_P004 | Maize | cytosol | 65.24 | 63.72 |
| Zm00001d035595_P003 | Maize | cytosol | 65.24 | 63.72 |
| AT1G19550.1 | Thale cress | cytosol | 44.29 | 60.78 |
| TraesCS1B01G059100.1 | Wheat | cytosol | 68.1 | 59.58 |
| Solyc05g013950.1.1 | Tomato | plastid | 40.0 | 59.57 |
| VIT_00s0317g00040.t01 | Wine grape | vacuole | 11.43 | 58.54 |
| Bra035356.1-P | Field mustard | cytosol | 28.1 | 57.84 |
| Zm00001d011035_P001 | Maize | endoplasmic reticulum | 66.67 | 52.83 |
| GSMUA_Achr11P... | Banana | plastid | 67.62 | 51.26 |
| OQU77257 | Sorghum | plastid | 68.1 | 49.31 |
| HORVU1Hr1G008120.1 | Barley | extracellular | 68.57 | 46.75 |
| TraesCS1A01G045700.1 | Wheat | golgi | 69.05 | 46.62 |
| PGSC0003DMT400040588 | Potato | cytosol, plastid | 59.05 | 46.27 |
| CDY65006 | Canola | extracellular | 14.29 | 46.15 |
Protein Annotations
| Gene3D:1.20.1050.10 | MapMan:10.4.1.3 | EntrezGene:102577622 | Gene3D:3.40.30.10 | ProteinID:ABA46750 | ProteinID:ABA46750.1 |
| ProteinID:ABB29932 | ProteinID:ABB29932.1 | ProteinID:ABF59819 | ProteinID:ABF59819.1 | EMBL:DQ200357 | EMBL:DQ235175 |
| EMBL:DQ512964 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005975 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0033355 | GO:GO:0045174 |
| GO:GO:0098869 | InterPro:Glutathione-S-Trfase_C-like | InterPro:Glutathione-S-Trfase_C_sf | InterPro:Glutathione_S-Trfase_N | InterPro:IPR004045 | InterPro:IPR010987 |
| UniProt:M1C5D7 | PFAM:PF13417 | EnsemblPlantsGene:PGSC0003DMG400023416 | PGSC:PGSC0003DMG400023416 | EnsemblPlants:PGSC0003DMT400060193 | PFscan:PS50404 |
| PFscan:PS50405 | PANTHER:PTHR44420 | PANTHER:PTHR44420:SF2 | SUPFAM:SSF47616 | SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf |
| UniParc:UPI00029517C4 | : | : | : | : | : |
Description
Dehydroascorbate reductase [Source:PGSC_GENE;Acc:PGSC0003DMG400023416]
Coordinates
chr5:-:50507632..50514220
Molecular Weight (calculated)
23455.3 Da
IEP (calculated)
6.792
GRAVY (calculated)
-0.184
Length
210 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVEVCVKAA VGAPDVLGDC PFSQRVLLTL EEKKVTYKKH LINVSDKPKW FLEVNPEGKV PVINFGDKWI PDSDVIVGII EEKYPNPSLI APPEFASVGS
101: KLFPTFVSFL KSKDSSDGTE QALLDELKAL EEHLKAHGPY ANGQNVCSVD MSLAPKLYHL EVALGHFKKW SVPESLSHVR NYMKLLFERE SFQKTKAEEK
201: YVIAGWAPKV
101: KLFPTFVSFL KSKDSSDGTE QALLDELKAL EEHLKAHGPY ANGQNVCSVD MSLAPKLYHL EVALGHFKKW SVPESLSHVR NYMKLLFERE SFQKTKAEEK
201: YVIAGWAPKV
001: MALDICVKVA VGAPDVLGDC PFSQRVLLTL EEKKLPYKTH LINVSDKPQW FLDISPEGKV PVVKLDGKWV ADSDVIVGLL EEKYPEPSLK TPPEFASVGS
101: KIFGAFVTFL KSKDANDGSE KALVDELEAL ENHLKTHSGP FVAGEKITAV DLSLAPKLYH LEVALGHYKN WSVPESLTSV RNYAKALFSR ESFENTKAKK
201: EIVVAGWESK VNA
101: KIFGAFVTFL KSKDANDGSE KALVDELEAL ENHLKTHSGP FVAGEKITAV DLSLAPKLYH LEVALGHYKN WSVPESLTSV RNYAKALFSR ESFENTKAKK
201: EIVVAGWESK VNA
Arabidopsis Description
DHAR2Glutathione S-transferase DHAR2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FRL8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.