CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 2
plastid 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
EER92066
EER93634
EER94182
EER97051
EER97052
EER99195
EER99196
EES11834
KXG36016
KXG38625
OQU92304

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G19570.1	EER92066	AT2G31790.1	21798944
AT1G19570.1	EER93634	AT2G31790.1	21798944
AT1G19570.1	EER94182	AT2G31790.1	21798944
AT1G19570.1	EER97051	AT2G31790.1	21798944
AT1G19570.1	EER97052	AT2G31790.1	21798944
AT1G19570.1	EER99195	AT2G31790.1	21798944
AT1G19570.1	EER99196	AT2G31790.1	21798944
AT1G19570.1	EES11834	AT2G31790.1	21798944
AT1G19570.1	KXG36016	AT2G31790.1	21798944
AT1G19570.1	KXG38625	AT2G31790.1	21798944
AT1G19570.1	OQU92304	AT2G31790.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0116100-01	Rice	extracellular	58.62	79.81
EES18912	Sorghum	cytosol	57.93	78.5
Zm00001d011035_P001	Maize	endoplasmic reticulum	71.03	77.74
GSMUA_Achr11P...	Banana	cytosol, unclear	53.79	71.56
TraesCS1B01G059100.1	Wheat	cytosol	58.28	70.42
KRG92962	Soybean	mitochondrion	51.03	69.48
Solyc05g054760.2.1	Tomato	extracellular	49.31	68.1
PGSC0003DMT400060193	Potato	cytosol	49.31	68.1
KRH36212	Soybean	cytosol, mitochondrion, nucleus	50.0	68.08
Bra025749.1-P	Field mustard	cytosol	48.62	66.2
CDY29420	Canola	cytosol	48.62	66.2
CDY39369	Canola	cytosol	48.62	66.2
CDX96659	Canola	cytosol	43.1	66.14
CDX83759	Canola	cytosol	43.45	65.28
VIT_00s0317g00050.t01	Wine grape	cytosol	47.24	64.62
AT1G75270.1	Thale cress	cytosol	47.24	64.32
Bra016503.1-P	Field mustard	cytosol	46.55	64.29
CDY62535	Canola	cytosol	46.55	63.08
Bra008188.1-P	Field mustard	cytosol	45.86	62.15
AT1G19570.1	Thale cress	cytosol	45.52	61.97
CDY37249	Canola	cytosol	45.52	61.68
HORVU1Hr1G008120.1	Barley	extracellular	61.03	57.47
CDY37653	Canola	cytosol	12.07	57.38
GSMUA_Achr11P...	Banana	plastid	54.48	57.04
TraesCS1A01G045700.1	Wheat	golgi	60.69	56.59
AT1G19550.1	Thale cress	cytosol	28.62	54.25
VIT_00s0317g00040.t01	Wine grape	vacuole	7.24	51.22
Bra035356.1-P	Field mustard	cytosol	17.24	49.02
Solyc11g039930.1.1	Tomato	cytosol	15.86	48.42
CDY65006	Canola	extracellular	10.0	44.62
KXG19661	Sorghum	plastid	40.0	44.27
Solyc09g056180.2.1	Tomato	cytosol	15.52	43.69
Solyc06g075520.2.1	Tomato	cytosol	16.21	42.73
Solyc05g013950.1.1	Tomato	plastid	20.34	41.84

Protein Annotations

Gene3D:1.20.1050.10	MapMan:10.4.1.3	Gene3D:3.40.30.10	UniProt:A0A1Z5R0E4	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf
InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	EnsemblPlants:OQU77257	ProteinID:OQU77257	ProteinID:OQU77257.1
PFAM:PF13417	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR44420	PANTHER:PTHR44420:SF2	EnsemblPlantsGene:SORBI_3009G017732
SUPFAM:SSF47616	SUPFAM:SSF52833	TMHMM:TMhelix	InterPro:Thioredoxin-like_sf	UniParc:UPI000B8B98ED	SEG:seg

Description

hypothetical protein

Coordinates

chr9:-:1647355..1650671

Molecular Weight (calculated)

31509.5 Da

IEP (calculated)

10.119

GRAVY (calculated)

0.006

Length

290 amino acids

Sequence
(BLAST)

001: MHAACAATHY PRSTDGRSLG DTPMAAGHKN TTTATLLVLL LSLMLSLTVS VARLSIATAV EVCVKAAVGA PDKLGDCPFS QRVLLTLEEK KVPYQLKLID
101: LSNKPGWFLK ISPEGKVPVY NGGDGKWIPD SDVITQVIEK KYPTPSLITP PEYASVGSKI FPSFVKFLMS KNAKDGSEKA LLHELQALEL HLKAHGRPYI
201: SAKNVSAVDL SLAPKLFHLV VALEHFKHWK VPESLSNVHA YTKALFSRES FIKTKPTKEH LIAGWVAHGA RVSPRAHGAL LVPGGHPRLI

Best Arabidopsis Sequence Match ( AT1G75270.1 )
(BLAST)

001: MALDICVKVA VGAPDVLGDC PFSQRVLLTL EEKKLPYKTH LINVSDKPQW FLDISPEGKV PVVKLDGKWV ADSDVIVGLL EEKYPEPSLK TPPEFASVGS
101: KIFGAFVTFL KSKDANDGSE KALVDELEAL ENHLKTHSGP FVAGEKITAV DLSLAPKLYH LEVALGHYKN WSVPESLTSV RNYAKALFSR ESFENTKAKK
201: EIVVAGWESK VNA

Arabidopsis Description

DHAR2Glutathione S-transferase DHAR2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FRL8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.