Factsheet for VIT_00s0317g00050.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_05s0094g01000.t01
VIT_05s0094g01020.t01
VIT_05s0094g01030.t01
VIT_05s0094g01040.t01
VIT_05s0094g01050.t01
VIT_05s0094g01060.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G19570.1	VIT_05s0094g01000.t01	AT2G31790.1	21798944
AT1G19570.1	VIT_05s0094g01020.t01	AT2G31790.1	21798944
AT1G19570.1	VIT_05s0094g01030.t01	AT2G31790.1	21798944
AT1G19570.1	VIT_05s0094g01040.t01	AT2G31790.1	21798944
AT1G19570.1	VIT_05s0094g01050.t01	AT2G31790.1	21798944
AT1G19570.1	VIT_05s0094g01060.t01	AT2G31790.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG92962	Soybean	mitochondrion	74.06	73.71
KRH36212	Soybean	cytosol, mitochondrion, nucleus	72.64	72.3
AT1G75270.1	Thale cress	cytosol	72.17	71.83
Bra025749.1-P	Field mustard	cytosol	72.17	71.83
CDY39369	Canola	cytosol	72.17	71.83
CDY29420	Canola	cytosol	72.17	71.83
GSMUA_Achr11P...	Banana	cytosol, unclear	71.7	69.72
EES18912	Sorghum	cytosol	69.81	69.16
AT1G19570.1	Thale cress	cytosol	69.34	69.01
Os05t0116100-01	Rice	extracellular	69.34	69.01
CDX83759	Canola	cytosol	62.26	68.39
CDX96659	Canola	cytosol	60.85	68.25
CDY62535	Canola	cytosol	67.45	66.82
Bra008188.1-P	Field mustard	cytosol	67.45	66.82
Bra016503.1-P	Field mustard	cytosol	66.04	66.67
Zm00001d011034_P004	Maize	cytosol	67.45	66.51
CDY37249	Canola	cytosol	66.51	65.89
GSMUA_Achr6P34340_001	Banana	cytosol	66.98	64.55
Zm00001d035595_P003	Maize	cytosol	65.09	64.19
CDY37653	Canola	cytosol	17.92	62.3
AT1G19550.1	Thale cress	cytosol	43.87	60.78
TraesCS1B01G059100.1	Wheat	cytosol	65.57	57.92
VIT_00s0317g00040.t01	Wine grape	vacuole	10.85	56.1
Bra035356.1-P	Field mustard	cytosol	25.94	53.92
GSMUA_Achr11P...	Banana	plastid	68.4	52.35
Zm00001d011035_P001	Maize	endoplasmic reticulum	64.15	51.32
CDY65006	Canola	extracellular	14.62	47.69
OQU77257	Sorghum	plastid	64.62	47.24
HORVU1Hr1G008120.1	Barley	extracellular	66.04	45.45
TraesCS1A01G045700.1	Wheat	golgi	66.51	45.34
VIT_14s0006g00630.t01	Wine grape	plastid	58.02	42.56

Protein Annotations

Gene3D:1.20.1050.10	MapMan:10.4.1.3	EntrezGene:100233050	wikigene:100233050	Gene3D:3.40.30.10	UniProt:A5AHY0
ProteinID:ABX79343	ProteinID:ABX79343.1	EMBL:AM427177	ProteinID:CAN62497	ProteinID:CAN62497.1	ProteinID:CBI33169
ProteinID:CBI33169.3	EntrezGene:DHAR	wikigene:DHAR	EMBL:EU280162	EMBL:FN596030	GO:GO:0003674
GO:GO:0003824	GO:GO:0004364	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006749	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016740	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987
PFAM:PF13410	PFAM:PF13417	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR44420	PANTHER:PTHR44420:SF2
SUPFAM:SSF47616	SUPFAM:SSF52833	TIGR:TC54132	InterPro:Thioredoxin-like_sf	UniParc:UPI000151EA4B	ArrayExpress:VIT_00s0317g00050
EnsemblPlantsGene:VIT_00s0317g00050	EnsemblPlants:VIT_00s0317g00050.t01	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrUn:-:23009032..23012975

Molecular Weight (calculated)

23690.4 Da

IEP (calculated)

6.171

GRAVY (calculated)

-0.344

Length

212 amino acids

Sequence
(BLAST)

001: MSFEVCVKAA AGDPEILGDC PFSQRVLLTL EEKKVPYKMH LINVNEKPQW FLEMNPEGKV PVIKVDDKWV PDSDVITGVL EEKHPSPPLA PPPEHSSVGS
101: KIFPAFVKFL KSKDPNDGSE QALLDELKAL DDHLKDHGPY INGENICAVD LSLAPKLYHL QVALGHYKNW TIPESLSHVH NYMKLLFSRE SFEKTKPAPD
201: HVVAGWAPKV NA

Best Arabidopsis Sequence Match ( AT1G75270.1 )
(BLAST)

001: MALDICVKVA VGAPDVLGDC PFSQRVLLTL EEKKLPYKTH LINVSDKPQW FLDISPEGKV PVVKLDGKWV ADSDVIVGLL EEKYPEPSLK TPPEFASVGS
101: KIFGAFVTFL KSKDANDGSE KALVDELEAL ENHLKTHSGP FVAGEKITAV DLSLAPKLYH LEVALGHYKN WSVPESLTSV RNYAKALFSR ESFENTKAKK
201: EIVVAGWESK VNA

Arabidopsis Description

DHAR2Glutathione S-transferase DHAR2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FRL8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.