Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G19570.1 | CDY15370 | AT2G31790.1 | 21798944 |
| AT1G19570.1 | CDY19104 | AT2G31790.1 | 21798944 |
| AT1G19570.1 | CDY34513 | AT2G31790.1 | 21798944 |
| AT1G19570.1 | CDY42069 | AT2G31790.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra025749.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDY39369 | Canola | cytosol | 99.53 | 99.53 |
| AT1G19570.1 | Thale cress | cytosol | 84.51 | 84.51 |
| CDX96659 | Canola | cytosol | 73.24 | 82.54 |
| CDX83759 | Canola | cytosol | 74.18 | 81.87 |
| CDY62535 | Canola | cytosol | 77.46 | 77.1 |
| CDY37249 | Canola | cytosol | 76.53 | 76.17 |
| Solyc05g054760.2.1 | Tomato | extracellular | 73.71 | 74.76 |
| PGSC0003DMT400060193 | Potato | cytosol | 73.71 | 74.76 |
| KRG92962 | Soybean | mitochondrion | 74.65 | 74.65 |
| AT1G19550.1 | Thale cress | cytosol | 53.52 | 74.51 |
| KRH36212 | Soybean | cytosol, mitochondrion, nucleus | 72.77 | 72.77 |
| VIT_00s0317g00050.t01 | Wine grape | cytosol | 71.83 | 72.17 |
| Os05t0116100-01 | Rice | extracellular | 68.08 | 68.08 |
| EES18912 | Sorghum | cytosol | 66.67 | 66.36 |
| GSMUA_Achr6P34340_001 | Banana | cytosol | 67.61 | 65.45 |
| GSMUA_Achr11P... | Banana | cytosol, unclear | 66.67 | 65.14 |
| Zm00001d035595_P003 | Maize | cytosol | 64.32 | 63.72 |
| Zm00001d011034_P004 | Maize | cytosol | 64.32 | 63.72 |
| CDY37653 | Canola | cytosol | 17.84 | 62.3 |
| TraesCS1B01G059100.1 | Wheat | cytosol | 67.61 | 60.0 |
| VIT_00s0317g00040.t01 | Wine grape | vacuole | 11.27 | 58.54 |
| Solyc11g039930.1.1 | Tomato | cytosol | 25.35 | 56.84 |
| Zm00001d011035_P001 | Maize | endoplasmic reticulum | 65.26 | 52.45 |
| CDY65006 | Canola | extracellular | 15.96 | 52.31 |
| Solyc06g075520.2.1 | Tomato | cytosol | 26.76 | 51.82 |
| CDX85490 | Canola | mitochondrion | 61.97 | 51.36 |
| GSMUA_Achr11P... | Banana | plastid | 65.26 | 50.18 |
| Solyc05g013950.1.1 | Tomato | plastid | 32.86 | 49.65 |
| CDX69428 | Canola | plastid | 61.5 | 49.25 |
| OQU77257 | Sorghum | plastid | 66.2 | 48.62 |
| Solyc09g056180.2.1 | Tomato | cytosol | 23.47 | 48.54 |
| HORVU1Hr1G008120.1 | Barley | extracellular | 68.08 | 47.08 |
| TraesCS1A01G045700.1 | Wheat | golgi | 68.08 | 46.62 |
| CDY10902 | Canola | mitochondrion | 33.33 | 36.98 |
| CDY33899 | Canola | cytosol, mitochondrion, plastid | 13.62 | 14.15 |
Protein Annotations
| Gene3D:1.20.1050.10 | MapMan:10.4.1.3 | Gene3D:3.40.30.10 | UniProt:A0A078GSE8 | EnsemblPlants:CDY29420 | ProteinID:CDY29420 |
| ProteinID:CDY29420.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00043017001 | InterPro:Glutathione-S-Trfase_C-like |
| InterPro:Glutathione-S-Trfase_C_sf | InterPro:Glutathione_S-Trfase_N | InterPro:IPR004045 | InterPro:IPR010987 | PFAM:PF13410 | PFAM:PF13417 |
| PFscan:PS50404 | PFscan:PS50405 | PANTHER:PTHR44420 | PANTHER:PTHR44420:SF2 | SUPFAM:SSF47616 | SUPFAM:SSF52833 |
| InterPro:Thioredoxin-like_sf | UniParc:UPI000253EE7F | SEG:seg | : | : | : |
Description
BnaA06g13760DBnaA06g13760D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GSE8]
Coordinates
chrLK032236:+:419103..420104
Molecular Weight (calculated)
23549.2 Da
IEP (calculated)
6.091
GRAVY (calculated)
-0.203
Length
213 amino acids
Sequence
(BLAST)
(BLAST)
001: MALEVCVKAA VGAPDALGDC PFSQRVLLTL EEKNLPYKMH LINISDKPQW FLAISPEGKV PVLKNDDKWV SDSDVITGIL EEKYPEPSLK TPPEFASVGS
101: KIFGTFVTFL KSKDSSDGSE KALLDELEAL ETHLKTHDGP FIAGGKVSAV DLSLAPKLYH LKVALGHYKS WSVPESLPHV HGYMKALFSL DSFEKTKTEE
201: RYVIAGWEHK VNP
101: KIFGTFVTFL KSKDSSDGSE KALLDELEAL ETHLKTHDGP FIAGGKVSAV DLSLAPKLYH LKVALGHYKS WSVPESLPHV HGYMKALFSL DSFEKTKTEE
201: RYVIAGWEHK VNP
001: MALEICVKAA VGAPDHLGDC PFSQRALLTL EEKSLTYKIH LINLSDKPQW FLDISPQGKV PVLKIDDKWV TDSDVIVGIL EEKYPDPPLK TPAEFASVGS
101: NIFGTFGTFL KSKDSNDGSE HALLVELEAL ENHLKSHDGP FIAGERVSAV DLSLAPKLYH LQVALGHFKS WSVPESFPHV HNYMKTLFSL DSFEKTKTEE
201: KYVISGWAPK VNP
101: NIFGTFGTFL KSKDSNDGSE HALLVELEAL ENHLKSHDGP FIAGERVSAV DLSLAPKLYH LQVALGHFKS WSVPESFPHV HNYMKTLFSL DSFEKTKTEE
201: KYVISGWAPK VNP
Arabidopsis Description
DHAR1Glutathione S-transferase DHAR1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FWR4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.