CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

plastid 3
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra020633.1-P	Field mustard	cytosol, mitochondrion	83.9	49.14
CDY37653	Canola	cytosol	10.73	36.07
CDX85490	Canola	mitochondrion	33.17	26.46
CDX69428	Canola	plastid	33.66	25.94
Solyc11g011250.1.1	Tomato	plastid	21.46	16.42
CDX96659	Canola	cytosol	14.63	15.87
PGSC0003DMT400040588	Potato	cytosol, plastid	20.49	15.67
CDX83759	Canola	cytosol	14.63	15.54
KRH30940	Soybean	nucleus	19.02	15.06
CDY62535	Canola	cytosol	15.61	14.95
KRG97934	Soybean	nucleus	19.02	14.94
Os06t0232600-01	Rice	extracellular, plasma membrane	19.51	14.71
CDY37249	Canola	cytosol	15.12	14.49
VIT_14s0006g00630.t01	Wine grape	plastid	20.0	14.19
KXG19661	Sorghum	plastid	18.05	14.12
TraesCS7A01G190700.1	Wheat	plastid	18.05	14.07
TraesCS7D01G191700.1	Wheat	plastid	18.05	14.07
Zm00001d037240_P001	Maize	plastid	18.05	13.75
TraesCS7B01G095600.2	Wheat	plastid	17.56	13.69
CDY39369	Canola	cytosol	14.15	13.62
CDY29420	Canola	cytosol	14.15	13.62
CDY10902	Canola	mitochondrion	12.68	13.54
GSMUA_Achr7P18780_001	Banana	mitochondrion	20.98	13.27
HORVU7Hr1G038770.22	Barley	mitochondrion	20.0	12.77
CDY65006	Canola	extracellular	0.0	0.0

Protein Annotations

MapMan:17.1.2.1.39	Gene3D:2.20.25.30	MapMan:2.4.6.3.2	Gene3D:3.40.30.10	GO:A0A078H8S7	UniProt:A0A078H8S7
EnsemblPlants:CDY33899	ProteinID:CDY33899	ProteinID:CDY33899.1	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00055406001
InterPro:IPR011331	PFAM:PD005132	PFAM:PF01907	ScanProsite:PS01077	PANTHER:PTHR10768	PANTHER:PTHR10768:SF11
InterPro:Ribosomal_L37ae/L37e	InterPro:Ribosomal_L37e	InterPro:Ribosomal_L37e_CS	InterPro:Ribosomal_zn-bd	SUPFAM:SSF57829	UniParc:UPI0004EDAE49
SEG:seg	:	:	:	:	:

Description

BnaA02g30880DBnaA02g30880D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H8S7]

Coordinates

chrLK032324:+:151489..158219

Molecular Weight (calculated)

23343.8 Da

IEP (calculated)

11.025

GRAVY (calculated)

-0.338

Length

205 amino acids

Sequence
(BLAST)

001: MTKGTWSFGK RRNKSHTLCV RCGRRSFHIQ KSCCSTCAYP AARKRTYNWS VKAIRRKTTG TGTIRFQPST AVVLSASVSR AGFIKRCGLI KPRRTARFGT
101: MAMAAAPLKI CVKASITTPN KLGDCPFCQR VLLTMEEKHV PYDMKMHLLH RATKDLVFIR GDVVFTSKLT DEEAKWIMET AQSFYLNDTR YKLLERPKPV
201: GQIWS

Best Arabidopsis Sequence Match ( AT5G16710.1 )
(BLAST)

001: MISLRFQPST TAGVLSASVS RAGFIKRCGS TKPGRVGRFV TMATAASPLE ICVKASITTP NKLGDCPFCQ KVLLTMEEKN VPYDMKMVDL SNKPEWFLKI
101: SPEGKVPVVK FDEKWVPDSD VITQALEEKY PEPPLATPPE KASVGSKIFS TFVGFLKSKD SGDGTEQVLL DELTTFNDYI KDNGPFINGE KISAADLSLA
201: PKLYHMKIAL GHYKNWSVPD SLPFVKSYME NVFSRESFTN TRAETEDVIA GWRPKVMG

Arabidopsis Description

DHAR3DHAR3 [Source:UniProtKB/TrEMBL;Acc:A0A178UIL9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.