Factsheet for Zm00001d037240_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d038652_P003

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G16710.1	Zm00001d038652_P003	AT5G42980.1	15352244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG19661	Sorghum	plastid	92.57	95.04
TraesCS7A01G190700.1	Wheat	plastid	78.07	79.85
TraesCS7D01G191700.1	Wheat	plastid	77.7	79.47
TraesCS7B01G095600.2	Wheat	plastid	77.32	79.09
Bra023579.1-P	Field mustard	cytosol	51.3	75.41
Os06t0232600-01	Rice	extracellular, plasma membrane	72.12	71.32
HORVU7Hr1G038770.22	Barley	mitochondrion	77.7	65.11
AT5G16710.1	Thale cress	plastid	61.34	63.95
PGSC0003DMT400040588	Potato	cytosol, plastid	62.45	62.69
CDX85490	Canola	mitochondrion	59.85	62.65
CDX69428	Canola	plastid	60.22	60.9
Solyc11g011250.1.1	Tomato	plastid	60.59	60.82
KRG97934	Soybean	nucleus	58.36	60.15
KRH30940	Soybean	nucleus	57.25	59.46
Zm00001d011034_P004	Maize	cytosol	44.98	56.28
Zm00001d035595_P003	Maize	cytosol	44.61	55.81
GSMUA_Achr7P18780_001	Banana	mitochondrion	65.06	54.01
VIT_14s0006g00630.t01	Wine grape	plastid	55.39	51.56
Zm00001d011035_P001	Maize	endoplasmic reticulum	43.12	43.77
CDY10902	Canola	mitochondrion	29.0	40.62
CDY33899	Canola	cytosol, mitochondrion, plastid	13.75	18.05
Bra020633.1-P	Field mustard	cytosol, mitochondrion	17.1	13.14

Protein Annotations

Gene3D:1.20.1050.10	MapMan:10.4.1.3	Gene3D:3.40.30.10	UniProt:A0A1D6LVU5	ProteinID:AQK83378.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0009987	GO:GO:0016740
GO:GO:0098869	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	PFAM:PF13417	PFscan:PS50404
PANTHER:PTHR44420	PANTHER:PTHR44420:SF1	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI00084415F6
EnsemblPlantsGene:Zm00001d037240	EnsemblPlants:Zm00001d037240_P001	EnsemblPlants:Zm00001d037240_T001	SEG:seg	:	:

Description

Glutathione S-transferase DHAR3 chloroplastic

Coordinates

chr6:-:117483616..117495190

Molecular Weight (calculated)

29449.5 Da

IEP (calculated)

6.786

GRAVY (calculated)

-0.077

Length

269 amino acids

Sequence
(BLAST)

001: MAVLLRSTSA AASTAGPSSA LLATTFRRSR GCLLPRAAPQ RRLYVARASA QPLEVCAKES ITIPGRLGDC PFTQRVLLTI EEKHLPYDLK LVDLANKPDW
101: LFEINPEGKV PIVKLEEKWI GDSDVITQAL EEKYPEPPLA TPPEKASVGS KIFSTFIGFL KSKDPSDGTE EALLNELTSF DSYLKDNVSG LVAIGPFING
201: GIISAADLSL GPKLYHMEIT LGHYKNWSVP DSLSYVKTYM KSIFSMDSFV KTQALTEDVI AGWRPKVMG

Best Arabidopsis Sequence Match ( AT5G16710.1 )
(BLAST)

001: MISLRFQPST TAGVLSASVS RAGFIKRCGS TKPGRVGRFV TMATAASPLE ICVKASITTP NKLGDCPFCQ KVLLTMEEKN VPYDMKMVDL SNKPEWFLKI
101: SPEGKVPVVK FDEKWVPDSD VITQALEEKY PEPPLATPPE KASVGSKIFS TFVGFLKSKD SGDGTEQVLL DELTTFNDYI KDNGPFINGE KISAADLSLA
201: PKLYHMKIAL GHYKNWSVPD SLPFVKSYME NVFSRESFTN TRAETEDVIA GWRPKVMG

Arabidopsis Description

DHAR3DHAR3 [Source:UniProtKB/TrEMBL;Acc:A0A178UIL9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.