Factsheet for PGSC0003DMT400040588

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

cytosol: 22313117

msms PMID: 22313117 doi

S Lim, K Chisholm, RH Coffin, RD Peters, KI Al-Mughrabi, G Wang-Pruski, DM Pinto

Department of Plant and Animal Sciences, Nova Scotia Agricultural College, Truro, Nova Scotia, Canada.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g011250.1.1	Tomato	plastid	94.78	94.78
Bra023579.1-P	Field mustard	cytosol	51.12	74.86
AT5G16710.1	Thale cress	plastid	64.18	66.67
CDX69428	Canola	plastid	63.81	64.29
CDX85490	Canola	mitochondrion	61.57	64.2
KRG97934	Soybean	nucleus	61.19	62.84
Zm00001d037240_P001	Maize	plastid	62.69	62.45
KXG19661	Sorghum	plastid	60.82	62.21
Os06t0232600-01	Rice	extracellular, plasma membrane	62.69	61.76
KRH30940	Soybean	nucleus	59.33	61.39
TraesCS7A01G190700.1	Wheat	plastid	58.96	60.08
TraesCS7D01G191700.1	Wheat	plastid	58.58	59.7
TraesCS7B01G095600.2	Wheat	plastid	58.21	59.32
PGSC0003DMT400060193	Potato	cytosol	46.27	59.05
VIT_14s0006g00630.t01	Wine grape	plastid	55.6	51.56
GSMUA_Achr7P18780_001	Banana	mitochondrion	62.31	51.54
HORVU7Hr1G038770.22	Barley	mitochondrion	58.96	49.22
CDY10902	Canola	mitochondrion	29.85	41.67
CDY33899	Canola	cytosol, mitochondrion, plastid	15.67	20.49
Bra020633.1-P	Field mustard	cytosol, mitochondrion	17.91	13.71

Protein Annotations

Gene3D:1.20.1050.10	MapMan:10.4.1.3	Gene3D:3.40.30.10	ProteinID:ABM69253	ProteinID:ABM69253.1	ProteinID:ACJ70069
ProteinID:ACJ70069.1	EMBL:EF195334	EMBL:FJ477252	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009719
GO:GO:0009735	GO:GO:0009941	GO:GO:0009987	GO:GO:0010731	GO:GO:0019538	GO:GO:0045174
GO:GO:0098869	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987
UniProt:M1BA41	PFAM:PF13417	EnsemblPlantsGene:PGSC0003DMG400015691	PGSC:PGSC0003DMG400015691	EnsemblPlants:PGSC0003DMT400040588	PFscan:PS50404
PFscan:PS50405	PANTHER:PTHR44420	PANTHER:PTHR44420:SF1	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
UniParc:UPI000295FBC5	:	:	:	:	:

Description

Dehydroascorbate reductase [Source:PGSC_GENE;Acc:PGSC0003DMG400015691]

Coordinates

chr11:+:1676598..1682033

Molecular Weight (calculated)

30013.1 Da

IEP (calculated)

8.195

GRAVY (calculated)

-0.284

Length

268 amino acids

Sequence
(BLAST)

001: MSTVKITPSA ASFATSIKHL AGIQLPRLQN TIFTSNSTKF RAPRRAFTVS MAASLDTPLE VCVKQSITTP NKLGDCPFTQ RVLLTLEEKH LPYDMKFVDL
101: SNKPDWFLKI SPEGKVPLIK LDEKWVPDSD VITQALEEKF PEPPLTTPPE KASIGSKIFP KFVAFLKSKD PTDGTEQALL DELTAFNDYL KENGPFINGN
201: EVSAADLSLG PKLYHLEISL GHYKNWSIPD SLSYVKSYMK SIFSRESFIN TRALKEDVIE GWRPKVMG

Best Arabidopsis Sequence Match ( AT5G16710.1 )
(BLAST)

001: MISLRFQPST TAGVLSASVS RAGFIKRCGS TKPGRVGRFV TMATAASPLE ICVKASITTP NKLGDCPFCQ KVLLTMEEKN VPYDMKMVDL SNKPEWFLKI
101: SPEGKVPVVK FDEKWVPDSD VITQALEEKY PEPPLATPPE KASVGSKIFS TFVGFLKSKD SGDGTEQVLL DELTTFNDYI KDNGPFINGE KISAADLSLA
201: PKLYHMKIAL GHYKNWSVPD SLPFVKSYME NVFSRESFTN TRAETEDVIA GWRPKVMG

Arabidopsis Description

DHAR3DHAR3 [Source:UniProtKB/TrEMBL;Acc:A0A178UIL9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.