Factsheet for VIT_14s0006g00630.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra023579.1-P	Field mustard	cytosol	42.91	67.76
KRG97934	Soybean	nucleus	53.63	59.39
CDX85490	Canola	mitochondrion	52.6	59.14
KRH30940	Soybean	nucleus	52.94	59.07
AT5G16710.1	Thale cress	plastid	51.9	58.14
VIT_00s0317g00050.t01	Wine grape	cytosol	42.56	58.02
KXG19661	Sorghum	plastid	51.56	56.87
CDX69428	Canola	plastid	51.56	56.02
Solyc11g011250.1.1	Tomato	plastid	51.56	55.6
PGSC0003DMT400040588	Potato	cytosol, plastid	51.56	55.6
Zm00001d037240_P001	Maize	plastid	51.56	55.39
TraesCS7A01G190700.1	Wheat	plastid	48.44	53.23
Os06t0232600-01	Rice	extracellular, plasma membrane	49.83	52.94
TraesCS7D01G191700.1	Wheat	plastid	48.1	52.85
TraesCS7B01G095600.2	Wheat	plastid	47.75	52.47
VIT_00s0317g00040.t01	Wine grape	vacuole	7.27	51.22
GSMUA_Achr7P18780_001	Banana	mitochondrion	50.52	45.06
HORVU7Hr1G038770.22	Barley	mitochondrion	48.44	43.61
CDY10902	Canola	mitochondrion	28.37	42.71
CDY33899	Canola	cytosol, mitochondrion, plastid	14.19	20.0
Bra020633.1-P	Field mustard	cytosol, mitochondrion	16.61	13.71

Protein Annotations

Gene3D:1.20.1050.10	MapMan:10.4.1.3	Gene3D:3.40.30.10	ProteinID:CCB57619	ProteinID:CCB57619.1	UniProt:F6HSH9
EMBL:FN596245	GO:GO:0003674	GO:GO:0003824	GO:GO:0004364	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006749	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016740	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N
InterPro:IPR004045	InterPro:IPR010987	PFAM:PF13417	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR44420
PANTHER:PTHR44420:SF1	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0002109934	ArrayExpress:VIT_14s0006g00630
EnsemblPlantsGene:VIT_14s0006g00630	EnsemblPlants:VIT_14s0006g00630.t01	:	:	:	:

Description

No Description!

Coordinates

chr14:-:14745775..14767346

Molecular Weight (calculated)

32536.3 Da

IEP (calculated)

8.947

GRAVY (calculated)

-0.378

Length

289 amino acids

Sequence
(BLAST)

001: MSSVRIPPTA SAVSSTIKHL GYNPRFFTSH GGAKGVKRVG GERRKYSITM SSPLEVCVKA SVIIPNKLGD CPFSQRILLT LEEKHLPYEM KLVDLTNKPE
101: WFLKISPGGT VPVMKLDEKW IADSDVIAQS LEEKYPDPPL GTPPEKASVG SKIFPAFIGF LKSKDPSDGT EQTLLNELAS FDDYIKENGP FINGKDISAV
201: DLSLGPKLYH LEIALGHYKK WTVPDSLPFV KSYMKCLQNQ SPALLSHVLH RIISISLKKT LFRYEERTVK DEISFYEKTE YSQEREKER

Best Arabidopsis Sequence Match ( AT5G16710.1 )
(BLAST)

001: MISLRFQPST TAGVLSASVS RAGFIKRCGS TKPGRVGRFV TMATAASPLE ICVKASITTP NKLGDCPFCQ KVLLTMEEKN VPYDMKMVDL SNKPEWFLKI
101: SPEGKVPVVK FDEKWVPDSD VITQALEEKY PEPPLATPPE KASVGSKIFS TFVGFLKSKD SGDGTEQVLL DELTTFNDYI KDNGPFINGE KISAADLSLA
201: PKLYHMKIAL GHYKNWSVPD SLPFVKSYME NVFSRESFTN TRAETEDVIA GWRPKVMG

Arabidopsis Description

DHAR3DHAR3 [Source:UniProtKB/TrEMBL;Acc:A0A178UIL9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.