Factsheet for Os06t0232600-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

plastid 6
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

extracellular: 23159799
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 23159799 doi

SG Kim, Y Wang, KH Lee, ZY Park, J Park, J Wu, SJ Kwon, YH Lee, GK Agrawal, R Rakwal, ST Kim, KY Kang

Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju, 660-701, South Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra023579.1-P	Field mustard	cytosol	51.47	76.5
TraesCS7D01G191700.1	Wheat	plastid	72.06	74.52
TraesCS7A01G190700.1	Wheat	plastid	71.69	74.14
KXG19661	Sorghum	plastid	71.32	74.05
TraesCS7B01G095600.2	Wheat	plastid	70.96	73.38
Zm00001d037240_P001	Maize	plastid	71.32	72.12
AT5G16710.1	Thale cress	plastid	61.76	65.12
CDX85490	Canola	mitochondrion	60.66	64.2
CDX69428	Canola	plastid	62.13	63.53
PGSC0003DMT400040588	Potato	cytosol, plastid	61.76	62.69
Os05t0116100-01	Rice	extracellular	48.9	62.44
KRH30940	Soybean	nucleus	59.19	62.16
KRG97934	Soybean	nucleus	59.19	61.69
Solyc11g011250.1.1	Tomato	plastid	60.66	61.57
HORVU7Hr1G038770.22	Barley	mitochondrion	72.43	61.37
GSMUA_Achr7P18780_001	Banana	mitochondrion	64.71	54.32
VIT_14s0006g00630.t01	Wine grape	plastid	52.94	49.83
CDY10902	Canola	mitochondrion	29.78	42.19
CDY33899	Canola	cytosol, mitochondrion, plastid	14.71	19.51
Bra020633.1-P	Field mustard	cytosol, mitochondrion	17.28	13.43

Protein Annotations

Gene3D:1.20.1050.10	MapMan:10.4.1.3	Gene3D:3.40.30.10	EntrezGene:4340581	EMBL:AK106013	ProteinID:BAD38160.1
ProteinID:BAF19142.1	ProteinID:BAS96927.1	ProteinID:EEE65386.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004364
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006749	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0009636
GO:GO:0009987	GO:GO:0016491	GO:GO:0016740	GO:GO:0045174	GO:GO:0055114	GO:GO:0098869
InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	EnsemblPlantsGene:Os06g0232600
EnsemblPlants:Os06t0232600-01	PFAM:PF13410	PFAM:PF13417	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR44420
PANTHER:PTHR44420:SF1	UniProt:Q67UK9	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI00004264BA
RefSeq:XP_015641035.1	SEG:seg	:	:	:	:

Description

DEHYDROASCORBATE REDUCTASE 2Similar to Dehydroascorbate reductase. (Os06t0232600-01);Non-protein coding transcript. (Os06t0232600-02)

Coordinates

chr6:-:6892773..6895614

Molecular Weight (calculated)

29683.7 Da

IEP (calculated)

8.201

GRAVY (calculated)

-0.115

Length

272 amino acids

Sequence
(BLAST)

001: MAVLLRTTTS ATTATSGGSS SATALLATTF RRGGRRLLLL PATRGSAPRR AALLTARASA EPLEVCAKAS LTVPDRLGDC PFTQRVLLTI EEKHLPYDIK
101: LVDLANKPDW FLKISPEGKV PIVKLEEQWV ADSDVITQAI EEKYPEPSLA TPPEKASVGS KIFSTFIGFL KSKDPNDGTE QALLSELTSF DSYLKDNGPF
201: INGETISAAD LSLAPKLYHM EIALGHYKNW SVPDSLSHVK KYMKTIFSMD SFVKTIALQE DVIAGWRPKV MG

Best Arabidopsis Sequence Match ( AT5G16710.1 )
(BLAST)

001: MISLRFQPST TAGVLSASVS RAGFIKRCGS TKPGRVGRFV TMATAASPLE ICVKASITTP NKLGDCPFCQ KVLLTMEEKN VPYDMKMVDL SNKPEWFLKI
101: SPEGKVPVVK FDEKWVPDSD VITQALEEKY PEPPLATPPE KASVGSKIFS TFVGFLKSKD SGDGTEQVLL DELTTFNDYI KDNGPFINGE KISAADLSLA
201: PKLYHMKIAL GHYKNWSVPD SLPFVKSYME NVFSRESFTN TRAETEDVIA GWRPKVMG

Arabidopsis Description

DHAR3DHAR3 [Source:UniProtKB/TrEMBL;Acc:A0A178UIL9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.